RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
CSGALNACT2-201ENST00000374466 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
CSGALNACT2-201ENST00000374466 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
CSGALNACT2-201ENST00000374466 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
CSGALNACT2-201ENST00000374466 K7ERU9 68 aa6.08□□□□□ -1.44
CSGALNACT2-201ENST00000374466 HERC1Q15751 4861 aa6.07□□□□□ -1.44
CSGALNACT2-201ENST00000374466 IGKV3D-7A0A0C4DH55 119 aa6.07□□□□□ -1.44
CSGALNACT2-201ENST00000374466 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
CSGALNACT2-201ENST00000374466 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
CSGALNACT2-201ENST00000374466 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
CSGALNACT2-201ENST00000374466 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
CSGALNACT2-201ENST00000374466 BPY2O14599 106 aa6.05□□□□□ -1.44
CSGALNACT2-201ENST00000374466 C8orf17Q9NRJ1 99 aa6.05□□□□□ -1.44
CSGALNACT2-201ENST00000374466 NDUFB1O75438 58 aa6.05□□□□□ -1.44
CSGALNACT2-201ENST00000374466 LINC00313P59037 77 aa6.02□□□□□ -1.45
CSGALNACT2-201ENST00000374466 HIST1H4AP62805 103 aaKnown RBP6.01□□□□□ -1.45
CSGALNACT2-201ENST00000374466 VPS25Q9BRG1 176 aa6□□□□□ -1.45
CSGALNACT2-201ENST00000374466 K7EQZ3 153 aa5.99□□□□□ -1.45
CSGALNACT2-201ENST00000374466 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
CSGALNACT2-201ENST00000374466 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
CSGALNACT2-201ENST00000374466 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
CSGALNACT2-201ENST00000374466 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
CSGALNACT2-201ENST00000374466 HCG22E2RYF7 251 aa5.96□□□□□ -1.45
CSGALNACT2-201ENST00000374466 PRR4Q16378 134 aa5.96□□□□□ -1.45
CSGALNACT2-201ENST00000374466 A0A1B0GV72 72 aa5.96□□□□□ -1.46
CSGALNACT2-201ENST00000374466 NOTCH2NLQ7Z3S9 236 aa5.94□□□□□ -1.46
CSGALNACT2-201ENST00000374466 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
CSGALNACT2-201ENST00000374466 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
CSGALNACT2-201ENST00000374466 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
CSGALNACT2-201ENST00000374466 MPLKIPQ8TAP9 179 aa5.9□□□□□ -1.46
CSGALNACT2-201ENST00000374466 CASC2Q6XLA1 102 aa5.9□□□□□ -1.46
CSGALNACT2-201ENST00000374466 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
CSGALNACT2-201ENST00000374466 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
CSGALNACT2-201ENST00000374466 UQCRQO14949 82 aa5.88□□□□□ -1.47
CSGALNACT2-201ENST00000374466 H3BPC8 53 aa5.87□□□□□ -1.47
CSGALNACT2-201ENST00000374466 LPAP08519 4548 aa5.87□□□□□ -1.47
CSGALNACT2-201ENST00000374466 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
CSGALNACT2-201ENST00000374466 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
CSGALNACT2-201ENST00000374466 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
CSGALNACT2-201ENST00000374466 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
CSGALNACT2-201ENST00000374466 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
CSGALNACT2-201ENST00000374466 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
CSGALNACT2-201ENST00000374466 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
CSGALNACT2-201ENST00000374466 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
CSGALNACT2-201ENST00000374466 ATOX1O00244 68 aa5.81□□□□□ -1.48
CSGALNACT2-201ENST00000374466 Q8N9L7 120 aa5.81□□□□□ -1.48
CSGALNACT2-201ENST00000374466 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
CSGALNACT2-201ENST00000374466 LRP2P98164 4655 aa5.79□□□□□ -1.48
CSGALNACT2-201ENST00000374466 HRES1P13985 223 aa5.79□□□□□ -1.48
CSGALNACT2-201ENST00000374466 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
CSGALNACT2-201ENST00000374466 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
CSGALNACT2-201ENST00000374466 PCOTHQ58A44 107 aa5.77□□□□□ -1.49
CSGALNACT2-201ENST00000374466 LOC101927531A0A1B0GV80 90 aa5.76□□□□□ -1.49
CSGALNACT2-201ENST00000374466 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
CSGALNACT2-201ENST00000374466 Q5W150 140 aa5.75□□□□□ -1.49
CSGALNACT2-201ENST00000374466 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
CSGALNACT2-201ENST00000374466 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
CSGALNACT2-201ENST00000374466 A0A087WVE0 104 aa5.72□□□□□ -1.49
CSGALNACT2-201ENST00000374466 C7orf65Q6ZTY9 151 aa5.72□□□□□ -1.49
CSGALNACT2-201ENST00000374466 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
CSGALNACT2-201ENST00000374466 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
CSGALNACT2-201ENST00000374466 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
CSGALNACT2-201ENST00000374466 SPINK7P58062 85 aa5.67□□□□□ -1.5
CSGALNACT2-201ENST00000374466 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
CSGALNACT2-201ENST00000374466 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
CSGALNACT2-201ENST00000374466 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
CSGALNACT2-201ENST00000374466 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
CSGALNACT2-201ENST00000374466 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
CSGALNACT2-201ENST00000374466 A8MUN3 132 aa5.64□□□□□ -1.51
CSGALNACT2-201ENST00000374466 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
CSGALNACT2-201ENST00000374466 H0Y9P7 68 aa5.64□□□□□ -1.51
CSGALNACT2-201ENST00000374466 MP68P56378 58 aa5.62□□□□□ -1.51
CSGALNACT2-201ENST00000374466 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
CSGALNACT2-201ENST00000374466 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
CSGALNACT2-201ENST00000374466 COX7CP15954 63 aa5.6□□□□□ -1.51
CSGALNACT2-201ENST00000374466 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
CSGALNACT2-201ENST00000374466 NDUFS5O43920 106 aa5.6□□□□□ -1.51
CSGALNACT2-201ENST00000374466 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.51
CSGALNACT2-201ENST00000374466 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
CSGALNACT2-201ENST00000374466 NDUFC1O43677 76 aa5.58□□□□□ -1.52
CSGALNACT2-201ENST00000374466 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
CSGALNACT2-201ENST00000374466 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
CSGALNACT2-201ENST00000374466 MT1HP80294 61 aa5.55□□□□□ -1.52
CSGALNACT2-201ENST00000374466 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
CSGALNACT2-201ENST00000374466 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
CSGALNACT2-201ENST00000374466 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
CSGALNACT2-201ENST00000374466 H0YAA0 97 aa5.47□□□□□ -1.53
CSGALNACT2-201ENST00000374466 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
CSGALNACT2-201ENST00000374466 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
CSGALNACT2-201ENST00000374466 ANAPC13Q9BS18 74 aa5.45□□□□□ -1.54
CSGALNACT2-201ENST00000374466 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
CSGALNACT2-201ENST00000374466 H7BZZ5 65 aa5.43□□□□□ -1.54
CSGALNACT2-201ENST00000374466 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
CSGALNACT2-201ENST00000374466 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
CSGALNACT2-201ENST00000374466 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
CSGALNACT2-201ENST00000374466 C4orf26Q17RF5 130 aa5.37□□□□□ -1.55
CSGALNACT2-201ENST00000374466 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
CSGALNACT2-201ENST00000374466 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
CSGALNACT2-201ENST00000374466 ACYP2P14621 99 aa5.36□□□□□ -1.55
CSGALNACT2-201ENST00000374466 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms