RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 SERP1Q9Y6X1 66 aa13.75□□□□□ -0.21
SNX21-204ENST00000372542 LIMD2Q9BT23 127 aa13.74□□□□□ -0.21
SNX21-204ENST00000372542 VPS13BQ7Z7G8 4022 aa13.74□□□□□ -0.21
SNX21-204ENST00000372542 MRPL34Q9BQ48 92 aaKnown RBP13.74□□□□□ -0.21
SNX21-204ENST00000372542 C8orf87E5RJ46 101 aa13.71□□□□□ -0.21
SNX21-204ENST00000372542 TYMSOSQ8TAI1 123 aa13.71□□□□□ -0.21
SNX21-204ENST00000372542 TRAV22A0A0B4J277 110 aa13.71□□□□□ -0.22
SNX21-204ENST00000372542 LINC00208Q96KT6 92 aa13.71□□□□□ -0.22
SNX21-204ENST00000372542 DYNC1H1Q14204 4646 aaKnown RBP13.7□□□□□ -0.22
SNX21-204ENST00000372542 PKHD1P08F94 4074 aa13.7□□□□□ -0.22
SNX21-204ENST00000372542 C4orf48Q5BLP8 95 aa13.69□□□□□ -0.22
SNX21-204ENST00000372542 RYR2Q92736 4967 aa13.68□□□□□ -0.22
SNX21-204ENST00000372542 C1orf195Q5TG92 126 aa13.67□□□□□ -0.22
SNX21-204ENST00000372542 NOTCH2NLQ7Z3S9 236 aa13.67□□□□□ -0.22
SNX21-204ENST00000372542 SMR3BP02814 79 aaPredicted RBP13.67□□□□□ -0.22
SNX21-204ENST00000372542 NDUFS5O43920 106 aa13.64□□□□□ -0.23
SNX21-204ENST00000372542 OXTP01178 125 aa13.64□□□□□ -0.23
SNX21-204ENST00000372542 SPINK1P00995 79 aa13.64□□□□□ -0.23
SNX21-204ENST00000372542 C1orf64Q8NEQ6 169 aa13.63□□□□□ -0.23
SNX21-204ENST00000372542 KRTAP10-4P60372 401 aaPredicted RBP13.58□□□□□ -0.24
SNX21-204ENST00000372542 RPS29P62273 56 aaKnown RBP13.57□□□□□ -0.24
SNX21-204ENST00000372542 LINC00313P59037 77 aa13.57□□□□□ -0.24
SNX21-204ENST00000372542 SPAG11AQ6PDA7 123 aa13.57□□□□□ -0.24
SNX21-204ENST00000372542 PRR26Q8N8Z3 221 aa13.57□□□□□ -0.24
SNX21-204ENST00000372542 APOBP04114 4563 aaKnown RBP13.55□□□□□ -0.24
SNX21-204ENST00000372542 LINC00304Q8N9R0 145 aa13.54□□□□□ -0.24
SNX21-204ENST00000372542 SPANXA2-OT1Q8N9U9 137 aa13.53□□□□□ -0.24
SNX21-204ENST00000372542 CYP4F30PQ9H0H9 118 aa13.53□□□□□ -0.24
SNX21-204ENST00000372542 SMIM26A0A096LP01 95 aa13.46□□□□□ -0.26
SNX21-204ENST00000372542 KMT2CQ8NEZ4 4911 aaKnown RBP13.45□□□□□ -0.26
SNX21-204ENST00000372542 Q8N9P0 234 aaPredicted RBP13.45□□□□□ -0.26
SNX21-204ENST00000372542 LOC101927531A0A1B0GV80 90 aa13.41□□□□□ -0.26
SNX21-204ENST00000372542 KRTAP13-3Q3SY46 172 aa13.41□□□□□ -0.26
SNX21-204ENST00000372542 KRTAP16-1A8MUX0 517 aa13.39□□□□□ -0.27
SNX21-204ENST00000372542 FAM229AH3BQW9 127 aa13.39□□□□□ -0.27
SNX21-204ENST00000372542 PRR4Q16378 134 aa13.39□□□□□ -0.27
SNX21-204ENST00000372542 Q5W150 140 aa13.38□□□□□ -0.27
SNX21-204ENST00000372542 FAT1Q14517 4588 aa13.36□□□□□ -0.27
SNX21-204ENST00000372542 IGLV7-46A0A075B6I9 117 aa13.36□□□□□ -0.27
SNX21-204ENST00000372542 PCOTHQ58A44 107 aa13.34□□□□□ -0.27
SNX21-204ENST00000372542 FP248Q71RG6 208 aaPredicted RBP13.29□□□□□ -0.28
SNX21-204ENST00000372542 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
SNX21-204ENST00000372542 Q5VSD8 79 aa13.22□□□□□ -0.29
SNX21-204ENST00000372542 C4orf26Q17RF5 130 aa13.2□□□□□ -0.3
SNX21-204ENST00000372542 IGKV2-30P06310 120 aa13.18□□□□□ -0.3
SNX21-204ENST00000372542 RETNLBQ9BQ08 111 aa13.16□□□□□ -0.3
SNX21-204ENST00000372542 RYR3Q15413 4870 aa13.12□□□□□ -0.31
SNX21-204ENST00000372542 COA5Q86WW8 74 aa13.11□□□□□ -0.31
SNX21-204ENST00000372542 MPLKIPQ8TAP9 179 aa13.11□□□□□ -0.31
SNX21-204ENST00000372542 KRTAP10-8P60410 259 aa13.09□□□□□ -0.31
SNX21-204ENST00000372542 HSPG2P98160 4391 aa13.09□□□□□ -0.31
SNX21-204ENST00000372542 Q1T7F1 81 aa13.08□□□□□ -0.32
SNX21-204ENST00000372542 HRES1P13985 223 aa13.05□□□□□ -0.32
SNX21-204ENST00000372542 Q8N1X5 172 aa13.04□□□□□ -0.32
SNX21-204ENST00000372542 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.32
SNX21-204ENST00000372542 V9GYY9 64 aa13.02□□□□□ -0.32
SNX21-204ENST00000372542 RYR1P21817 5038 aa13.02□□□□□ -0.33
SNX21-204ENST00000372542 A8MUU9 505 aa13.02□□□□□ -0.33
SNX21-204ENST00000372542 C9orf92A6NGG3 77 aa13□□□□□ -0.33
SNX21-204ENST00000372542 IGKV2D-30A0A075B6S6 120 aa12.99□□□□□ -0.33
SNX21-204ENST00000372542 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
SNX21-204ENST00000372542 ACYP2P14621 99 aa12.97□□□□□ -0.33
SNX21-204ENST00000372542 DMAC1Q96GE9 116 aa12.97□□□□□ -0.33
SNX21-204ENST00000372542 C7orf65Q6ZTY9 151 aa12.94□□□□□ -0.34
SNX21-204ENST00000372542 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
SNX21-204ENST00000372542 TNXBP22105 4242 aa12.89□□□□□ -0.35
SNX21-204ENST00000372542 Q75L30 129 aa12.85□□□□□ -0.35
SNX21-204ENST00000372542 LRP1Q07954 4544 aaKnown RBP12.82□□□□□ -0.36
SNX21-204ENST00000372542 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
SNX21-204ENST00000372542 PSPHP1O15172 72 aa12.78□□□□□ -0.36
SNX21-204ENST00000372542 CHKB-CPT1BH3BT56 60 aa12.77□□□□□ -0.37
SNX21-204ENST00000372542 KIAA1109Q2LD37 5005 aa12.77□□□□□ -0.37
SNX21-204ENST00000372542 MT1HL1P0DM35 61 aa12.76□□□□□ -0.37
SNX21-204ENST00000372542 A8MUN3 132 aa12.75□□□□□ -0.37
SNX21-204ENST00000372542 LINC01558Q9Y6Z2 57 aa12.75□□□□□ -0.37
SNX21-204ENST00000372542 PRR15LQ9BU68 103 aa12.71□□□□□ -0.38
SNX21-204ENST00000372542 Q5VV11 94 aa12.69□□□□□ -0.38
SNX21-204ENST00000372542 SVIPQ8NHG7 77 aa12.66□□□□□ -0.38
SNX21-204ENST00000372542 SPINK7P58062 85 aa12.65□□□□□ -0.38
SNX21-204ENST00000372542 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
SNX21-204ENST00000372542 ATP11AUNQ6ZP68 121 aa12.63□□□□□ -0.39
SNX21-204ENST00000372542 BRK1Q8WUW1 75 aa12.63□□□□□ -0.39
SNX21-204ENST00000372542 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
SNX21-204ENST00000372542 RPL37P61927 97 aaKnown RBP12.61□□□□□ -0.39
SNX21-204ENST00000372542 PRO0628Q9UI54 55 aa12.61□□□□□ -0.39
SNX21-204ENST00000372542 XP32Q5T750 250 aa12.58□□□□□ -0.4
SNX21-204ENST00000372542 MYCBP2O75592 4640 aa12.46□□□□□ -0.41
SNX21-204ENST00000372542 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
SNX21-204ENST00000372542 KRTAP4-5Q9BYR2 181 aa12.44□□□□□ -0.42
SNX21-204ENST00000372542 COX6B2Q6YFQ2 88 aa12.43□□□□□ -0.42
SNX21-204ENST00000372542 KRTAP3-1Q9BYR8 98 aa12.43□□□□□ -0.42
SNX21-204ENST00000372542 A6NED7 52 aa12.42□□□□□ -0.42
SNX21-204ENST00000372542 TPRXLQ17RH7 258 aa12.41□□□□□ -0.42
SNX21-204ENST00000372542 A0A1B0GU69 56 aa12.4□□□□□ -0.42
SNX21-204ENST00000372542 CDC42SE1Q9NRR8 79 aa12.28□□□□□ -0.44
SNX21-204ENST00000372542 LCA10Q71F78 164 aa12.25□□□□□ -0.45
SNX21-204ENST00000372542 SEC61GP60059 68 aa12.21□□□□□ -0.45
SNX21-204ENST00000372542 A8MU10 97 aa12.19□□□□□ -0.46
SNX21-204ENST00000372542 J3QL48 77 aa12.18□□□□□ -0.46
SNX21-204ENST00000372542 UQCR11O14957 56 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms