RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MMP24-AS1A0A0U1RRL7 71 aa14.93□□□□□ -0.02
ATPAF1-202ENST00000371937 C8orf17Q9NRJ1 99 aa14.93□□□□□ -0.02
ATPAF1-202ENST00000371937 LRP1Q07954 4544 aaKnown RBP14.92□□□□□ -0.02
ATPAF1-202ENST00000371937 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
ATPAF1-202ENST00000371937 SERP2Q8N6R1 65 aa14.92□□□□□ -0.02
ATPAF1-202ENST00000371937 hDV103S1A0JD37 113 aa14.89□□□□□ -0.03
ATPAF1-202ENST00000371937 FLG2Q5D862 2391 aaPredicted RBP14.89□□□□□ -0.03
ATPAF1-202ENST00000371937 TRAV7A0A075B6U4 112 aa14.87□□□□□ -0.03
ATPAF1-202ENST00000371937 FAT3Q8TDW7 4589 aa14.86□□□□□ -0.03
ATPAF1-202ENST00000371937 C8orf87E5RJ46 101 aa14.86□□□□□ -0.03
ATPAF1-202ENST00000371937 COX7CP15954 63 aa14.85□□□□□ -0.03
ATPAF1-202ENST00000371937 TNXBP22105 4242 aa14.84□□□□□ -0.03
ATPAF1-202ENST00000371937 OCR1Q9BZK8 76 aa14.84□□□□□ -0.03
ATPAF1-202ENST00000371937 OXTP01178 125 aa14.82□□□□□ -0.04
ATPAF1-202ENST00000371937 NOTCH2NLQ7Z3S9 236 aa14.82□□□□□ -0.04
ATPAF1-202ENST00000371937 BIRC6Q9NR09 4857 aa14.81□□□□□ -0.04
ATPAF1-202ENST00000371937 KRTAP4-5Q9BYR2 181 aa14.81□□□□□ -0.04
ATPAF1-202ENST00000371937 UQCRQO14949 82 aa14.8□□□□□ -0.04
ATPAF1-202ENST00000371937 LINC00313P59037 77 aa14.79□□□□□ -0.04
ATPAF1-202ENST00000371937 TMEM254Q8TBM7 123 aa14.78□□□□□ -0.04
ATPAF1-202ENST00000371937 MT1HL1P0DM35 61 aa14.78□□□□□ -0.04
ATPAF1-202ENST00000371937 MYCBP2O75592 4640 aa14.76□□□□□ -0.05
ATPAF1-202ENST00000371937 MRPL34Q9BQ48 92 aaKnown RBP14.76□□□□□ -0.05
ATPAF1-202ENST00000371937 CCDC179H3BU77 68 aa14.73□□□□□ -0.05
ATPAF1-202ENST00000371937 RETNLBQ9BQ08 111 aa14.69□□□□□ -0.06
ATPAF1-202ENST00000371937 TP53AIP1Q9HCN2 124 aa14.66□□□□□ -0.06
ATPAF1-202ENST00000371937 DMBT1Q9UGM3 2413 aaPredicted RBP14.66□□□□□ -0.06
ATPAF1-202ENST00000371937 NDUFS5O43920 106 aa14.65□□□□□ -0.06
ATPAF1-202ENST00000371937 HERC2O95714 4834 aa14.64□□□□□ -0.07
ATPAF1-202ENST00000371937 C5orf47Q569G3 176 aa14.62□□□□□ -0.07
ATPAF1-202ENST00000371937 C20orf197Q8N268 126 aa14.61□□□□□ -0.07
ATPAF1-202ENST00000371937 KRTAP16-1A8MUX0 517 aa14.6□□□□□ -0.07
ATPAF1-202ENST00000371937 FP248Q71RG6 208 aaPredicted RBP14.59□□□□□ -0.07
ATPAF1-202ENST00000371937 Q8N9P0 234 aaPredicted RBP14.57□□□□□ -0.08
ATPAF1-202ENST00000371937 MP68P56378 58 aa14.53□□□□□ -0.08
ATPAF1-202ENST00000371937 KLKP1Q107X0 134 aa14.52□□□□□ -0.08
ATPAF1-202ENST00000371937 ABCA13Q86UQ4 5058 aa14.52□□□□□ -0.08
ATPAF1-202ENST00000371937 TRAV22A0A0B4J277 110 aa14.51□□□□□ -0.09
ATPAF1-202ENST00000371937 A0A0U1RQV1 116 aa14.49□□□□□ -0.09
ATPAF1-202ENST00000371937 C9orf92A6NGG3 77 aa14.49□□□□□ -0.09
ATPAF1-202ENST00000371937 H0Y9P7 68 aa14.49□□□□□ -0.09
ATPAF1-202ENST00000371937 SNURFQ9Y675 71 aa14.49□□□□□ -0.09
ATPAF1-202ENST00000371937 H3BPC8 53 aa14.45□□□□□ -0.1
ATPAF1-202ENST00000371937 IGLV7-46A0A075B6I9 117 aa14.44□□□□□ -0.1
ATPAF1-202ENST00000371937 J3QL48 77 aa14.43□□□□□ -0.1
ATPAF1-202ENST00000371937 CYSTM1Q9H1C7 97 aa14.42□□□□□ -0.1
ATPAF1-202ENST00000371937 LINC00208Q96KT6 92 aa14.41□□□□□ -0.1
ATPAF1-202ENST00000371937 NDUFC1O43677 76 aa14.38□□□□□ -0.11
ATPAF1-202ENST00000371937 ZCCHC13Q8WW36 166 aaKnown RBP14.38□□□□□ -0.11
ATPAF1-202ENST00000371937 Q5W150 140 aa14.37□□□□□ -0.11
ATPAF1-202ENST00000371937 C1orf64Q8NEQ6 169 aa14.36□□□□□ -0.11
ATPAF1-202ENST00000371937 C20orf166-AS1Q96NR2 134 aa14.36□□□□□ -0.11
ATPAF1-202ENST00000371937 PRR4Q16378 134 aa14.35□□□□□ -0.11
ATPAF1-202ENST00000371937 A8MUU9 505 aa14.34□□□□□ -0.11
ATPAF1-202ENST00000371937 KRTAP13-3Q3SY46 172 aa14.34□□□□□ -0.11
ATPAF1-202ENST00000371937 H7BZZ5 65 aa14.31□□□□□ -0.12
ATPAF1-202ENST00000371937 LOC101927531A0A1B0GV80 90 aa14.25□□□□□ -0.13
ATPAF1-202ENST00000371937 Q75L30 129 aa14.25□□□□□ -0.13
ATPAF1-202ENST00000371937 TMEM258P61165 79 aa14.24□□□□□ -0.13
ATPAF1-202ENST00000371937 TPRXLQ17RH7 258 aa14.19□□□□□ -0.14
ATPAF1-202ENST00000371937 XP32Q5T750 250 aa14.17□□□□□ -0.14
ATPAF1-202ENST00000371937 CYP4F30PQ9H0H9 118 aa14.14□□□□□ -0.15
ATPAF1-202ENST00000371937 IGKV2-30P06310 120 aa14.13□□□□□ -0.15
ATPAF1-202ENST00000371937 RPL37P61927 97 aaKnown RBP14.11□□□□□ -0.15
ATPAF1-202ENST00000371937 PCOTHQ58A44 107 aa14.08□□□□□ -0.15
ATPAF1-202ENST00000371937 FAM236DA0A1B0GTK5 79 aa14.08□□□□□ -0.16
ATPAF1-202ENST00000371937 FAM236CP0DP71 79 aa14.08□□□□□ -0.16
ATPAF1-202ENST00000371937 ATP11AUNQ6ZP68 121 aa14.08□□□□□ -0.16
ATPAF1-202ENST00000371937 IGKV2D-30A0A075B6S6 120 aa14.06□□□□□ -0.16
ATPAF1-202ENST00000371937 ATP5EP56381 51 aaPredicted RBP14.06□□□□□ -0.16
ATPAF1-202ENST00000371937 PCLOQ9Y6V0 5065 aa14.03□□□□□ -0.16
ATPAF1-202ENST00000371937 SPANXA2-OT1Q8N9U9 137 aa14.03□□□□□ -0.16
ATPAF1-202ENST00000371937 C7orf65Q6ZTY9 151 aa14.01□□□□□ -0.17
ATPAF1-202ENST00000371937 RPS28P62857 69 aaKnown RBP13.92□□□□□ -0.18
ATPAF1-202ENST00000371937 HRES1P13985 223 aa13.9□□□□□ -0.18
ATPAF1-202ENST00000371937 SPINK7P58062 85 aa13.89□□□□□ -0.19
ATPAF1-202ENST00000371937 LPAP08519 4548 aa13.84□□□□□ -0.19
ATPAF1-202ENST00000371937 LRP2P98164 4655 aa13.8□□□□□ -0.2
ATPAF1-202ENST00000371937 SERP1Q9Y6X1 66 aa13.79□□□□□ -0.2
ATPAF1-202ENST00000371937 HERC1Q15751 4861 aa13.72□□□□□ -0.21
ATPAF1-202ENST00000371937 SEC61BP60468 96 aaKnown RBP13.71□□□□□ -0.21
ATPAF1-202ENST00000371937 DMAC1Q96GE9 116 aa13.7□□□□□ -0.22
ATPAF1-202ENST00000371937 C4orf26Q17RF5 130 aa13.69□□□□□ -0.22
ATPAF1-202ENST00000371937 ACYP2P14621 99 aa13.65□□□□□ -0.22
ATPAF1-202ENST00000371937 A8MUN3 132 aa13.6□□□□□ -0.23
ATPAF1-202ENST00000371937 COA5Q86WW8 74 aa13.58□□□□□ -0.24
ATPAF1-202ENST00000371937 HMCN2Q8NDA2 5059 aa13.57□□□□□ -0.24
ATPAF1-202ENST00000371937 COX6B2Q6YFQ2 88 aa13.54□□□□□ -0.24
ATPAF1-202ENST00000371937 KRTAP3-1Q9BYR8 98 aa13.47□□□□□ -0.25
ATPAF1-202ENST00000371937 SMIM26A0A096LP01 95 aa13.45□□□□□ -0.26
ATPAF1-202ENST00000371937 CHKB-CPT1BH3BT56 60 aa13.43□□□□□ -0.26
ATPAF1-202ENST00000371937 MUC17Q685J3 4493 aa13.4□□□□□ -0.26
ATPAF1-202ENST00000371937 MPLKIPQ8TAP9 179 aa13.39□□□□□ -0.27
ATPAF1-202ENST00000371937 RBM12B-AS1Q9P1G2 102 aa13.37□□□□□ -0.27
ATPAF1-202ENST00000371937 KRTAP4-1Q9BYQ7 146 aa13.32□□□□□ -0.28
ATPAF1-202ENST00000371937 H1FX-AS1Q4G0G2 97 aa13.23□□□□□ -0.29
ATPAF1-202ENST00000371937 SPTSSBQ8NFR3 76 aa13.19□□□□□ -0.3
ATPAF1-202ENST00000371937 Q1T7F1 81 aa13.18□□□□□ -0.3
ATPAF1-202ENST00000371937 V9GYY9 64 aa13.17□□□□□ -0.3
ATPAF1-202ENST00000371937 S4R3F8 94 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms