RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
LHX3-202ENST00000371748 PKHD1P08F94 4074 aa11.76□□□□□ -0.53
LHX3-202ENST00000371748 SPANXA2-OT1Q8N9U9 137 aa11.74□□□□□ -0.53
LHX3-202ENST00000371748 H3BPC8 53 aa11.73□□□□□ -0.53
LHX3-202ENST00000371748 VPS13BQ7Z7G8 4022 aa11.72□□□□□ -0.53
LHX3-202ENST00000371748 A8MUN3 132 aa11.68□□□□□ -0.54
LHX3-202ENST00000371748 V9GYY9 64 aa11.68□□□□□ -0.54
LHX3-202ENST00000371748 A0A087X002 238 aa11.66□□□□□ -0.54
LHX3-202ENST00000371748 MMP24-AS1A0A0U1RRL7 71 aa11.66□□□□□ -0.54
LHX3-202ENST00000371748 SEC61GP60059 68 aa11.64□□□□□ -0.55
LHX3-202ENST00000371748 SSBP3-AS1Q7Z2R9 100 aa11.63□□□□□ -0.55
LHX3-202ENST00000371748 KRTAP13-2Q52LG2 175 aa11.62□□□□□ -0.55
LHX3-202ENST00000371748 Q5VV11 94 aa11.62□□□□□ -0.55
LHX3-202ENST00000371748 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
LHX3-202ENST00000371748 IGHV6-1A0A0B4J1U7 121 aa11.59□□□□□ -0.55
LHX3-202ENST00000371748 DYNC1H1Q14204 4646 aaKnown RBP11.59□□□□□ -0.55
LHX3-202ENST00000371748 CD164Q04900 197 aa11.59□□□□□ -0.55
LHX3-202ENST00000371748 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
LHX3-202ENST00000371748 KRTAP1-4P0C5Y4 121 aa11.58□□□□□ -0.56
LHX3-202ENST00000371748 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
LHX3-202ENST00000371748 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
LHX3-202ENST00000371748 RYR2Q92736 4967 aa11.57□□□□□ -0.56
LHX3-202ENST00000371748 ASB16-AS1Q495Z4 193 aa11.56□□□□□ -0.56
LHX3-202ENST00000371748 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
LHX3-202ENST00000371748 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
LHX3-202ENST00000371748 A8MU10 97 aa11.55□□□□□ -0.56
LHX3-202ENST00000371748 IGLV7-46A0A075B6I9 117 aa11.55□□□□□ -0.56
LHX3-202ENST00000371748 LIMD2Q9BT23 127 aa11.54□□□□□ -0.56
LHX3-202ENST00000371748 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
LHX3-202ENST00000371748 NOTCH2NLQ7Z3S9 236 aa11.52□□□□□ -0.57
LHX3-202ENST00000371748 COA5Q86WW8 74 aa11.52□□□□□ -0.57
LHX3-202ENST00000371748 SMR3BP02814 79 aaPredicted RBP11.5□□□□□ -0.57
LHX3-202ENST00000371748 TP53AIP1Q9HCN2 124 aa11.49□□□□□ -0.57
LHX3-202ENST00000371748 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
LHX3-202ENST00000371748 PMAIP1Q13794 54 aa11.48□□□□□ -0.57
LHX3-202ENST00000371748 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
LHX3-202ENST00000371748 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
LHX3-202ENST00000371748 CHKB-CPT1BH3BT56 60 aa11.48□□□□□ -0.57
LHX3-202ENST00000371748 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
LHX3-202ENST00000371748 NDUFS5O43920 106 aa11.43□□□□□ -0.58
LHX3-202ENST00000371748 MRPL34Q9BQ48 92 aaKnown RBP11.43□□□□□ -0.58
LHX3-202ENST00000371748 LOC101927531A0A1B0GV80 90 aa11.42□□□□□ -0.58
LHX3-202ENST00000371748 Q75L30 129 aa11.41□□□□□ -0.58
LHX3-202ENST00000371748 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
LHX3-202ENST00000371748 FAT1Q14517 4588 aa11.4□□□□□ -0.59
LHX3-202ENST00000371748 LCA10Q71F78 164 aa11.36□□□□□ -0.59
LHX3-202ENST00000371748 PRR26Q8N8Z3 221 aa11.35□□□□□ -0.59
LHX3-202ENST00000371748 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
LHX3-202ENST00000371748 A6NED7 52 aa11.32□□□□□ -0.6
LHX3-202ENST00000371748 KRTAP10-4P60372 401 aaPredicted RBP11.32□□□□□ -0.6
LHX3-202ENST00000371748 SPAG11AQ6PDA7 123 aa11.32□□□□□ -0.6
LHX3-202ENST00000371748 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
LHX3-202ENST00000371748 HRES1P13985 223 aa11.31□□□□□ -0.6
LHX3-202ENST00000371748 LINC01558Q9Y6Z2 57 aa11.31□□□□□ -0.6
LHX3-202ENST00000371748 LINC00313P59037 77 aa11.29□□□□□ -0.6
LHX3-202ENST00000371748 SPINK1P00995 79 aa11.28□□□□□ -0.6
LHX3-202ENST00000371748 ATP11AUNQ6ZP68 121 aa11.26□□□□□ -0.61
LHX3-202ENST00000371748 SPTSSBQ8NFR3 76 aa11.26□□□□□ -0.61
LHX3-202ENST00000371748 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
LHX3-202ENST00000371748 Q5W150 140 aa11.23□□□□□ -0.61
LHX3-202ENST00000371748 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
LHX3-202ENST00000371748 RYR3Q15413 4870 aa11.22□□□□□ -0.61
LHX3-202ENST00000371748 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
LHX3-202ENST00000371748 PKHD1L1Q86WI1 4243 aa11.18□□□□□ -0.62
LHX3-202ENST00000371748 KRTAP16-1A8MUX0 517 aa11.17□□□□□ -0.62
LHX3-202ENST00000371748 KTN1-AS1Q86SY8 53 aa11.17□□□□□ -0.62
LHX3-202ENST00000371748 A6NN06 94 aa11.16□□□□□ -0.62
LHX3-202ENST00000371748 SPINK7P58062 85 aa11.15□□□□□ -0.62
LHX3-202ENST00000371748 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
LHX3-202ENST00000371748 RETNLBQ9BQ08 111 aa11.13□□□□□ -0.63
LHX3-202ENST00000371748 HSPG2P98160 4391 aa11.08□□□□□ -0.63
LHX3-202ENST00000371748 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
LHX3-202ENST00000371748 ACYP2P14621 99 aa11.04□□□□□ -0.64
LHX3-202ENST00000371748 Q5VSD8 79 aa11.01□□□□□ -0.65
LHX3-202ENST00000371748 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
LHX3-202ENST00000371748 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
LHX3-202ENST00000371748 RYR1P21817 5038 aa10.98□□□□□ -0.65
LHX3-202ENST00000371748 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
LHX3-202ENST00000371748 IGKV2-30P06310 120 aa10.95□□□□□ -0.66
LHX3-202ENST00000371748 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
LHX3-202ENST00000371748 C7orf65Q6ZTY9 151 aa10.94□□□□□ -0.66
LHX3-202ENST00000371748 TNXBP22105 4242 aa10.94□□□□□ -0.66
LHX3-202ENST00000371748 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
LHX3-202ENST00000371748 FLG2Q5D862 2391 aaPredicted RBP10.91□□□□□ -0.66
LHX3-202ENST00000371748 Q8N1X5 172 aa10.91□□□□□ -0.66
LHX3-202ENST00000371748 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
LHX3-202ENST00000371748 KIAA1109Q2LD37 5005 aa10.86□□□□□ -0.67
LHX3-202ENST00000371748 KRTAP10-8P60410 259 aa10.85□□□□□ -0.67
LHX3-202ENST00000371748 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
LHX3-202ENST00000371748 A0A1B0GU69 56 aa10.82□□□□□ -0.68
LHX3-202ENST00000371748 EPPK1P58107 5090 aaKnown RBP10.81□□□□□ -0.68
LHX3-202ENST00000371748 A8MUU9 505 aa10.79□□□□□ -0.68
LHX3-202ENST00000371748 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
LHX3-202ENST00000371748 SPATA8Q6RVD6 105 aa10.75□□□□□ -0.69
LHX3-202ENST00000371748 MYCBP2O75592 4640 aa10.72□□□□□ -0.69
LHX3-202ENST00000371748 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.69
LHX3-202ENST00000371748 UQCR11O14957 56 aa10.67□□□□□ -0.7
LHX3-202ENST00000371748 MIR22HGQ0VDD5 57 aa10.66□□□□□ -0.7
LHX3-202ENST00000371748 PRAC1Q96KF2 57 aa10.66□□□□□ -0.7
LHX3-202ENST00000371748 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms