RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
TGFBR3-202ENST00000370399 A8MUN3 132 aa4.22□□□□□ -1.73
TGFBR3-202ENST00000370399 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.73
TGFBR3-202ENST00000370399 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
TGFBR3-202ENST00000370399 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
TGFBR3-202ENST00000370399 LINC00483Q53H64 154 aa4.21□□□□□ -1.74
TGFBR3-202ENST00000370399 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
TGFBR3-202ENST00000370399 CD164Q04900 197 aa4.19□□□□□ -1.74
TGFBR3-202ENST00000370399 COA5Q86WW8 74 aa4.19□□□□□ -1.74
TGFBR3-202ENST00000370399 FAM229BQ4G0N7 80 aa4.19□□□□□ -1.74
TGFBR3-202ENST00000370399 KRTAP21-3Q3LHN1 58 aa4.18□□□□□ -1.74
TGFBR3-202ENST00000370399 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
TGFBR3-202ENST00000370399 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
TGFBR3-202ENST00000370399 HUWE1Q7Z6Z7 4374 aaKnown RBP4.16□□□□□ -1.74
TGFBR3-202ENST00000370399 Q8N1X5 172 aa4.15□□□□□ -1.74
TGFBR3-202ENST00000370399 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
TGFBR3-202ENST00000370399 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
TGFBR3-202ENST00000370399 OXTP01178 125 aa4.13□□□□□ -1.75
TGFBR3-202ENST00000370399 Q5VSD8 79 aa4.13□□□□□ -1.75
TGFBR3-202ENST00000370399 UQCR11O14957 56 aa4.13□□□□□ -1.75
TGFBR3-202ENST00000370399 J3QL48 77 aa4.13□□□□□ -1.75
TGFBR3-202ENST00000370399 HRES1P13985 223 aa4.11□□□□□ -1.75
TGFBR3-202ENST00000370399 Q5W150 140 aa4.11□□□□□ -1.75
TGFBR3-202ENST00000370399 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
TGFBR3-202ENST00000370399 H3BS24 57 aa4.1□□□□□ -1.75
TGFBR3-202ENST00000370399 Q6ZSA8 131 aa4.1□□□□□ -1.75
TGFBR3-202ENST00000370399 IGLV7-46A0A075B6I9 117 aa4.09□□□□□ -1.75
TGFBR3-202ENST00000370399 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
TGFBR3-202ENST00000370399 DNHD1Q96M86 4753 aa4.09□□□□□ -1.75
TGFBR3-202ENST00000370399 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
TGFBR3-202ENST00000370399 ANK2Q01484 3957 aa4.07□□□□□ -1.76
TGFBR3-202ENST00000370399 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
TGFBR3-202ENST00000370399 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
TGFBR3-202ENST00000370399 ZCCHC13Q8WW36 166 aaKnown RBP4.06□□□□□ -1.76
TGFBR3-202ENST00000370399 DNAH9Q9NYC9 4486 aa4.06□□□□□ -1.76
TGFBR3-202ENST00000370399 Q5XG85 94 aa4.06□□□□□ -1.76
TGFBR3-202ENST00000370399 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
TGFBR3-202ENST00000370399 SPINK7P58062 85 aa4.03□□□□□ -1.76
TGFBR3-202ENST00000370399 PLECQ15149 4684 aaKnown RBP4.03□□□□□ -1.76
TGFBR3-202ENST00000370399 LCA10Q71F78 164 aa4.02□□□□□ -1.77
TGFBR3-202ENST00000370399 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
TGFBR3-202ENST00000370399 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
TGFBR3-202ENST00000370399 Q1T7F1 81 aa4.02□□□□□ -1.77
TGFBR3-202ENST00000370399 DNAH10Q8IVF4 4471 aa4.02□□□□□ -1.77
TGFBR3-202ENST00000370399 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
TGFBR3-202ENST00000370399 CRIPTQ9P021 101 aa4□□□□□ -1.77
TGFBR3-202ENST00000370399 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
TGFBR3-202ENST00000370399 A0A0D9SG42 100 aa3.98□□□□□ -1.77
TGFBR3-202ENST00000370399 COX6B2Q6YFQ2 88 aa3.96□□□□□ -1.78
TGFBR3-202ENST00000370399 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
TGFBR3-202ENST00000370399 STARD9Q9P2P6 4700 aa3.95□□□□□ -1.78
TGFBR3-202ENST00000370399 Q75L30 129 aa3.95□□□□□ -1.78
TGFBR3-202ENST00000370399 Q5VV11 94 aa3.94□□□□□ -1.78
TGFBR3-202ENST00000370399 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
TGFBR3-202ENST00000370399 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
TGFBR3-202ENST00000370399 RBM12B-AS1Q9P1G2 102 aa3.93□□□□□ -1.78
TGFBR3-202ENST00000370399 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
TGFBR3-202ENST00000370399 LYSTQ99698 3801 aa3.92□□□□□ -1.78
TGFBR3-202ENST00000370399 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
TGFBR3-202ENST00000370399 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
TGFBR3-202ENST00000370399 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
TGFBR3-202ENST00000370399 A0A1B0GU33 70 aa3.9□□□□□ -1.79
TGFBR3-202ENST00000370399 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
TGFBR3-202ENST00000370399 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
TGFBR3-202ENST00000370399 A8MU10 97 aa3.87□□□□□ -1.79
TGFBR3-202ENST00000370399 CMYA5Q8N3K9 4069 aa3.87□□□□□ -1.79
TGFBR3-202ENST00000370399 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
TGFBR3-202ENST00000370399 A8MUU9 505 aa3.85□□□□□ -1.79
TGFBR3-202ENST00000370399 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.79
TGFBR3-202ENST00000370399 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.79
TGFBR3-202ENST00000370399 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
TGFBR3-202ENST00000370399 S4R3F8 94 aa3.84□□□□□ -1.79
TGFBR3-202ENST00000370399 FAT1Q14517 4588 aa3.83□□□□□ -1.8
TGFBR3-202ENST00000370399 DNAH3Q8TD57 4116 aa3.82□□□□□ -1.8
TGFBR3-202ENST00000370399 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
TGFBR3-202ENST00000370399 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
TGFBR3-202ENST00000370399 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
TGFBR3-202ENST00000370399 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
TGFBR3-202ENST00000370399 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
TGFBR3-202ENST00000370399 XP32Q5T750 250 aa3.8□□□□□ -1.8
TGFBR3-202ENST00000370399 SPATA8Q6RVD6 105 aa3.8□□□□□ -1.8
TGFBR3-202ENST00000370399 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
TGFBR3-202ENST00000370399 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
TGFBR3-202ENST00000370399 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
TGFBR3-202ENST00000370399 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
TGFBR3-202ENST00000370399 M0R2T5 61 aa3.76□□□□□ -1.81
TGFBR3-202ENST00000370399 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
TGFBR3-202ENST00000370399 DNAH17Q9UFH2 4485 aa3.74□□□□□ -1.81
TGFBR3-202ENST00000370399 DNAH2Q9P225 4427 aa3.74□□□□□ -1.81
TGFBR3-202ENST00000370399 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
TGFBR3-202ENST00000370399 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
TGFBR3-202ENST00000370399 DYNC1H1Q14204 4646 aaKnown RBP3.73□□□□□ -1.81
TGFBR3-202ENST00000370399 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
TGFBR3-202ENST00000370399 R4GN34 69 aa3.72□□□□□ -1.81
TGFBR3-202ENST00000370399 DNAH6Q9C0G6 4158 aa3.72□□□□□ -1.81
TGFBR3-202ENST00000370399 FRAS1Q86XX4 4008 aa3.71□□□□□ -1.82
TGFBR3-202ENST00000370399 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
TGFBR3-202ENST00000370399 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
TGFBR3-202ENST00000370399 ROMO1P60602 79 aa3.69□□□□□ -1.82
TGFBR3-202ENST00000370399 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms