RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 A0A0D9SG42 100 aa7.34□□□□□ -1.24
RAP1A-202ENST00000369709 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.24
RAP1A-202ENST00000369709 A0A1B0GU33 70 aa7.33□□□□□ -1.24
RAP1A-202ENST00000369709 WWC2-AS2Q96NR7 200 aa7.33□□□□□ -1.24
RAP1A-202ENST00000369709 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
RAP1A-202ENST00000369709 A0A087WTM6 91 aa7.32□□□□□ -1.24
RAP1A-202ENST00000369709 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
RAP1A-202ENST00000369709 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
RAP1A-202ENST00000369709 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
RAP1A-202ENST00000369709 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
RAP1A-202ENST00000369709 NBEAL1Q6ZS30 2694 aa7.29□□□□□ -1.24
RAP1A-202ENST00000369709 MAST4O15021 2626 aa7.29□□□□□ -1.24
RAP1A-202ENST00000369709 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.24
RAP1A-202ENST00000369709 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
RAP1A-202ENST00000369709 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
RAP1A-202ENST00000369709 NSD1Q96L73 2696 aaPredicted RBP7.19□□□□□ -1.26
RAP1A-202ENST00000369709 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
RAP1A-202ENST00000369709 ROMO1P60602 79 aa7.15□□□□□ -1.27
RAP1A-202ENST00000369709 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
RAP1A-202ENST00000369709 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
RAP1A-202ENST00000369709 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
RAP1A-202ENST00000369709 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
RAP1A-202ENST00000369709 ITPR2Q14571 2701 aa7.09□□□□□ -1.27
RAP1A-202ENST00000369709 NBPF19A0A087WUL8 3843 aa7.08□□□□□ -1.28
RAP1A-202ENST00000369709 A8MUU9 505 aa7.07□□□□□ -1.28
RAP1A-202ENST00000369709 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
RAP1A-202ENST00000369709 STAB2Q8WWQ8 2551 aa7.04□□□□□ -1.28
RAP1A-202ENST00000369709 VWFP04275 2813 aa7.03□□□□□ -1.28
RAP1A-202ENST00000369709 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
RAP1A-202ENST00000369709 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
RAP1A-202ENST00000369709 SMR3BP02814 79 aaPredicted RBP6.99□□□□□ -1.29
RAP1A-202ENST00000369709 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
RAP1A-202ENST00000369709 Q6ZSA8 131 aa6.98□□□□□ -1.29
RAP1A-202ENST00000369709 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
RAP1A-202ENST00000369709 H0YAA0 97 aa6.96□□□□□ -1.3
RAP1A-202ENST00000369709 PDZD2O15018 2839 aa6.95□□□□□ -1.3
RAP1A-202ENST00000369709 SRRM2Q9UQ35 2752 aaKnown RBP6.94□□□□□ -1.3
RAP1A-202ENST00000369709 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
RAP1A-202ENST00000369709 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
RAP1A-202ENST00000369709 TENM1Q9UKZ4 2725 aa6.92□□□□□ -1.3
RAP1A-202ENST00000369709 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
RAP1A-202ENST00000369709 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
RAP1A-202ENST00000369709 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
RAP1A-202ENST00000369709 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
RAP1A-202ENST00000369709 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
RAP1A-202ENST00000369709 TRRAPQ9Y4A5 3859 aa6.85□□□□□ -1.31
RAP1A-202ENST00000369709 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
RAP1A-202ENST00000369709 TGP01266 2768 aa6.83□□□□□ -1.32
RAP1A-202ENST00000369709 S4R3F8 94 aa6.82□□□□□ -1.32
RAP1A-202ENST00000369709 ANK3Q12955 4377 aaKnown RBP6.81□□□□□ -1.32
RAP1A-202ENST00000369709 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
RAP1A-202ENST00000369709 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
RAP1A-202ENST00000369709 KMT2BQ9UMN6 2715 aaPredicted RBP6.79□□□□□ -1.32
RAP1A-202ENST00000369709 ZNF469Q96JG9 3925 aaPredicted RBP6.77□□□□□ -1.33
RAP1A-202ENST00000369709 CSMD3Q7Z407 3707 aa6.77□□□□□ -1.33
RAP1A-202ENST00000369709 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
RAP1A-202ENST00000369709 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
RAP1A-202ENST00000369709 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
RAP1A-202ENST00000369709 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
RAP1A-202ENST00000369709 TENM4Q6N022 2769 aa6.68□□□□□ -1.34
RAP1A-202ENST00000369709 P0C880 135 aa6.68□□□□□ -1.34
RAP1A-202ENST00000369709 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
RAP1A-202ENST00000369709 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
RAP1A-202ENST00000369709 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
RAP1A-202ENST00000369709 M0QZ58 72 aa6.57□□□□□ -1.36
RAP1A-202ENST00000369709 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
RAP1A-202ENST00000369709 R4GN34 69 aa6.56□□□□□ -1.36
RAP1A-202ENST00000369709 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
RAP1A-202ENST00000369709 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
RAP1A-202ENST00000369709 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
RAP1A-202ENST00000369709 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
RAP1A-202ENST00000369709 FBN3Q75N90 2809 aa6.43□□□□□ -1.38
RAP1A-202ENST00000369709 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
RAP1A-202ENST00000369709 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
RAP1A-202ENST00000369709 HUWE1Q7Z6Z7 4374 aaKnown RBP6.39□□□□□ -1.39
RAP1A-202ENST00000369709 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
RAP1A-202ENST00000369709 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
RAP1A-202ENST00000369709 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
RAP1A-202ENST00000369709 MEGF8Q7Z7M0 2845 aa6.31□□□□□ -1.4
RAP1A-202ENST00000369709 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
RAP1A-202ENST00000369709 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
RAP1A-202ENST00000369709 Q5VSD8 79 aa6.24□□□□□ -1.41
RAP1A-202ENST00000369709 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
RAP1A-202ENST00000369709 XP32Q5T750 250 aa6.2□□□□□ -1.42
RAP1A-202ENST00000369709 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
RAP1A-202ENST00000369709 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
RAP1A-202ENST00000369709 DNAH1Q9P2D7 4330 aa6.14□□□□□ -1.43
RAP1A-202ENST00000369709 ANK2Q01484 3957 aa6.14□□□□□ -1.43
RAP1A-202ENST00000369709 LYSTQ99698 3801 aa6.14□□□□□ -1.43
RAP1A-202ENST00000369709 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
RAP1A-202ENST00000369709 PLECQ15149 4684 aaKnown RBP6.11□□□□□ -1.43
RAP1A-202ENST00000369709 J3QL48 77 aa6.11□□□□□ -1.43
RAP1A-202ENST00000369709 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
RAP1A-202ENST00000369709 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
RAP1A-202ENST00000369709 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
RAP1A-202ENST00000369709 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
RAP1A-202ENST00000369709 TNP1P09430 55 aa6.01□□□□□ -1.45
RAP1A-202ENST00000369709 CMYA5Q8N3K9 4069 aa5.98□□□□□ -1.45
RAP1A-202ENST00000369709 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
RAP1A-202ENST00000369709 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms