RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
PHGDH-202ENST00000369409 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
PHGDH-202ENST00000369409 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
PHGDH-202ENST00000369409 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
PHGDH-202ENST00000369409 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
PHGDH-202ENST00000369409 IGHV6-1A0A0B4J1U7 121 aa9.59□□□□□ -0.87
PHGDH-202ENST00000369409 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
PHGDH-202ENST00000369409 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
PHGDH-202ENST00000369409 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
PHGDH-202ENST00000369409 TNXBP22105 4242 aa9.55□□□□□ -0.88
PHGDH-202ENST00000369409 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
PHGDH-202ENST00000369409 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-202ENST00000369409 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
PHGDH-202ENST00000369409 KRTAP29-1A8MX34 341 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-202ENST00000369409 KRTAP10-8P60410 259 aa9.53□□□□□ -0.88
PHGDH-202ENST00000369409 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
PHGDH-202ENST00000369409 hDV103S1A0JD37 113 aa9.51□□□□□ -0.89
PHGDH-202ENST00000369409 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
PHGDH-202ENST00000369409 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
PHGDH-202ENST00000369409 KRTAP4-5Q9BYR2 181 aa9.49□□□□□ -0.89
PHGDH-202ENST00000369409 MYCBP2O75592 4640 aa9.48□□□□□ -0.89
PHGDH-202ENST00000369409 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
PHGDH-202ENST00000369409 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
PHGDH-202ENST00000369409 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
PHGDH-202ENST00000369409 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
PHGDH-202ENST00000369409 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
PHGDH-202ENST00000369409 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
PHGDH-202ENST00000369409 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
PHGDH-202ENST00000369409 LINC00313P59037 77 aa9.42□□□□□ -0.9
PHGDH-202ENST00000369409 MRPL34Q9BQ48 92 aaKnown RBP9.42□□□□□ -0.9
PHGDH-202ENST00000369409 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
PHGDH-202ENST00000369409 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
PHGDH-202ENST00000369409 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
PHGDH-202ENST00000369409 C20orf197Q8N268 126 aa9.39□□□□□ -0.91
PHGDH-202ENST00000369409 NDUFS5O43920 106 aa9.38□□□□□ -0.91
PHGDH-202ENST00000369409 ATP5EP56381 51 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-202ENST00000369409 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
PHGDH-202ENST00000369409 OXTP01178 125 aa9.36□□□□□ -0.91
PHGDH-202ENST00000369409 NDUFC1O43677 76 aa9.36□□□□□ -0.91
PHGDH-202ENST00000369409 HERC2O95714 4834 aa9.35□□□□□ -0.91
PHGDH-202ENST00000369409 SMIM26A0A096LP01 95 aa9.35□□□□□ -0.91
PHGDH-202ENST00000369409 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-202ENST00000369409 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
PHGDH-202ENST00000369409 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
PHGDH-202ENST00000369409 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
PHGDH-202ENST00000369409 ABCA13Q86UQ4 5058 aa9.31□□□□□ -0.92
PHGDH-202ENST00000369409 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
PHGDH-202ENST00000369409 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
PHGDH-202ENST00000369409 H0Y9P7 68 aa9.29□□□□□ -0.92
PHGDH-202ENST00000369409 TRAV22A0A0B4J277 110 aa9.28□□□□□ -0.92
PHGDH-202ENST00000369409 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
PHGDH-202ENST00000369409 Q8N9P0 234 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-202ENST00000369409 H7BZZ5 65 aa9.27□□□□□ -0.93
PHGDH-202ENST00000369409 MP68P56378 58 aa9.27□□□□□ -0.93
PHGDH-202ENST00000369409 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-202ENST00000369409 LINC00208Q96KT6 92 aa9.23□□□□□ -0.93
PHGDH-202ENST00000369409 Q5W150 140 aa9.21□□□□□ -0.93
PHGDH-202ENST00000369409 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.93
PHGDH-202ENST00000369409 IGLV7-46A0A075B6I9 117 aa9.19□□□□□ -0.94
PHGDH-202ENST00000369409 H3BPC8 53 aa9.19□□□□□ -0.94
PHGDH-202ENST00000369409 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
PHGDH-202ENST00000369409 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
PHGDH-202ENST00000369409 J3QL48 77 aa9.16□□□□□ -0.94
PHGDH-202ENST00000369409 V9GYY9 64 aa9.15□□□□□ -0.94
PHGDH-202ENST00000369409 PRR4Q16378 134 aa9.15□□□□□ -0.95
PHGDH-202ENST00000369409 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.95
PHGDH-202ENST00000369409 A8MUU9 505 aa9.14□□□□□ -0.95
PHGDH-202ENST00000369409 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
PHGDH-202ENST00000369409 BRK1Q8WUW1 75 aa9.08□□□□□ -0.96
PHGDH-202ENST00000369409 Q75L30 129 aa9.06□□□□□ -0.96
PHGDH-202ENST00000369409 PCOTHQ58A44 107 aa9.06□□□□□ -0.96
PHGDH-202ENST00000369409 SEC61GP60059 68 aa9.05□□□□□ -0.96
PHGDH-202ENST00000369409 XP32Q5T750 250 aa9.05□□□□□ -0.96
PHGDH-202ENST00000369409 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
PHGDH-202ENST00000369409 CYP4F30PQ9H0H9 118 aa9.02□□□□□ -0.96
PHGDH-202ENST00000369409 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
PHGDH-202ENST00000369409 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
PHGDH-202ENST00000369409 RPL37P61927 97 aaKnown RBP8.99□□□□□ -0.97
PHGDH-202ENST00000369409 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
PHGDH-202ENST00000369409 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
PHGDH-202ENST00000369409 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
PHGDH-202ENST00000369409 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
PHGDH-202ENST00000369409 LPAP08519 4548 aa8.94□□□□□ -0.98
PHGDH-202ENST00000369409 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
PHGDH-202ENST00000369409 Q1T7F1 81 aa8.91□□□□□ -0.98
PHGDH-202ENST00000369409 HRES1P13985 223 aa8.9□□□□□ -0.98
PHGDH-202ENST00000369409 PMAIP1Q13794 54 aa8.89□□□□□ -0.99
PHGDH-202ENST00000369409 LRP2P98164 4655 aa8.86□□□□□ -0.99
PHGDH-202ENST00000369409 SPINK7P58062 85 aa8.85□□□□□ -0.99
PHGDH-202ENST00000369409 HERC1Q15751 4861 aa8.77□□□□□ -1
PHGDH-202ENST00000369409 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
PHGDH-202ENST00000369409 COA5Q86WW8 74 aa8.72□□□□□ -1.01
PHGDH-202ENST00000369409 ACYP2P14621 99 aa8.69□□□□□ -1.02
PHGDH-202ENST00000369409 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
PHGDH-202ENST00000369409 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
PHGDH-202ENST00000369409 A8MUN3 132 aa8.64□□□□□ -1.03
PHGDH-202ENST00000369409 PSPHP1O15172 72 aa8.63□□□□□ -1.03
PHGDH-202ENST00000369409 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
PHGDH-202ENST00000369409 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
PHGDH-202ENST00000369409 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms