RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 MGAQ8IWI9 3026 aa7.17□□□□□ -1.26
EDEM3-202ENST00000367512 BAHCC1Q9P281 2608 aa7.16□□□□□ -1.26
EDEM3-202ENST00000367512 NSD1Q96L73 2696 aaPredicted RBP7.13□□□□□ -1.27
EDEM3-202ENST00000367512 FRYQ5TBA9 3013 aa7.1□□□□□ -1.27
EDEM3-202ENST00000367512 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.28
EDEM3-202ENST00000367512 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
EDEM3-202ENST00000367512 KMT2BQ9UMN6 2715 aaPredicted RBP7.07□□□□□ -1.28
EDEM3-202ENST00000367512 KALRNO60229 2985 aa7.03□□□□□ -1.28
EDEM3-202ENST00000367512 XP32Q5T750 250 aa7.03□□□□□ -1.28
EDEM3-202ENST00000367512 MAP1AP78559 2803 aaPredicted RBP7.02□□□□□ -1.29
EDEM3-202ENST00000367512 IGSF10Q6WRI0 2623 aa7□□□□□ -1.29
EDEM3-202ENST00000367512 LRBAP50851 2863 aa6.99□□□□□ -1.29
EDEM3-202ENST00000367512 CSMD1Q96PZ7 3565 aa6.99□□□□□ -1.29
EDEM3-202ENST00000367512 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
EDEM3-202ENST00000367512 LAMA5O15230 3695 aa6.97□□□□□ -1.29
EDEM3-202ENST00000367512 FRYLO94915 3013 aa6.96□□□□□ -1.29
EDEM3-202ENST00000367512 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
EDEM3-202ENST00000367512 DMDP11532 3685 aa6.93□□□□□ -1.3
EDEM3-202ENST00000367512 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
EDEM3-202ENST00000367512 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
EDEM3-202ENST00000367512 ZNF292O60281 2723 aa6.92□□□□□ -1.3
EDEM3-202ENST00000367512 APCP25054 2843 aa6.91□□□□□ -1.3
EDEM3-202ENST00000367512 CHD9Q3L8U1 2897 aa6.91□□□□□ -1.3
EDEM3-202ENST00000367512 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
EDEM3-202ENST00000367512 TRANK1O15050 2925 aa6.89□□□□□ -1.31
EDEM3-202ENST00000367512 DMXL2Q8TDJ6 3036 aa6.89□□□□□ -1.31
EDEM3-202ENST00000367512 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
EDEM3-202ENST00000367512 ATMQ13315 3056 aa6.87□□□□□ -1.31
EDEM3-202ENST00000367512 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
EDEM3-202ENST00000367512 HIVEP1P15822 2718 aa6.84□□□□□ -1.31
EDEM3-202ENST00000367512 ITPR1Q14643 2758 aa6.84□□□□□ -1.31
EDEM3-202ENST00000367512 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
EDEM3-202ENST00000367512 DSPP15924 2871 aaKnown RBP6.79□□□□□ -1.32
EDEM3-202ENST00000367512 NBPF19A0A087WUL8 3843 aa6.77□□□□□ -1.33
EDEM3-202ENST00000367512 RELNP78509 3460 aa6.77□□□□□ -1.33
EDEM3-202ENST00000367512 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
EDEM3-202ENST00000367512 TACC2O95359 2948 aa6.76□□□□□ -1.33
EDEM3-202ENST00000367512 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
EDEM3-202ENST00000367512 MUC3AQ02505 3323 aa6.74□□□□□ -1.33
EDEM3-202ENST00000367512 ADGRG4Q8IZF6 3080 aa6.74□□□□□ -1.33
EDEM3-202ENST00000367512 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
EDEM3-202ENST00000367512 CRCT1Q9UGL9 99 aa6.7□□□□□ -1.34
EDEM3-202ENST00000367512 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
EDEM3-202ENST00000367512 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
EDEM3-202ENST00000367512 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.35
EDEM3-202ENST00000367512 COL12A1Q99715 3063 aa6.64□□□□□ -1.35
EDEM3-202ENST00000367512 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
EDEM3-202ENST00000367512 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
EDEM3-202ENST00000367512 NBEAQ8NFP9 2946 aa6.56□□□□□ -1.36
EDEM3-202ENST00000367512 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
EDEM3-202ENST00000367512 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
EDEM3-202ENST00000367512 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
EDEM3-202ENST00000367512 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
EDEM3-202ENST00000367512 ZFHX3Q15911 3703 aa6.51□□□□□ -1.37
EDEM3-202ENST00000367512 TGP01266 2768 aa6.5□□□□□ -1.37
EDEM3-202ENST00000367512 TENM4Q6N022 2769 aa6.49□□□□□ -1.37
EDEM3-202ENST00000367512 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
EDEM3-202ENST00000367512 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.38
EDEM3-202ENST00000367512 DCHS2Q6V1P9 2916 aa6.4□□□□□ -1.39
EDEM3-202ENST00000367512 CUBNO60494 3623 aa6.39□□□□□ -1.39
EDEM3-202ENST00000367512 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
EDEM3-202ENST00000367512 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
EDEM3-202ENST00000367512 FLNCQ14315 2725 aa6.35□□□□□ -1.39
EDEM3-202ENST00000367512 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
EDEM3-202ENST00000367512 NF1P21359 2839 aa6.3□□□□□ -1.4
EDEM3-202ENST00000367512 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
EDEM3-202ENST00000367512 NIPBLQ6KC79 2804 aaeCLIP6.28□□□□□ -1.4
EDEM3-202ENST00000367512 BSNQ9UPA5 3926 aa6.26□□□□□ -1.41
EDEM3-202ENST00000367512 CELSR1Q9NYQ6 3014 aa6.24□□□□□ -1.41
EDEM3-202ENST00000367512 KRTAP21-3Q3LHN1 58 aa6.24□□□□□ -1.41
EDEM3-202ENST00000367512 PDZD2O15018 2839 aa6.22□□□□□ -1.41
EDEM3-202ENST00000367512 VPS13CQ709C8 3753 aa6.22□□□□□ -1.41
EDEM3-202ENST00000367512 INE1O15225 51 aa6.2□□□□□ -1.42
EDEM3-202ENST00000367512 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
EDEM3-202ENST00000367512 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
EDEM3-202ENST00000367512 VWFP04275 2813 aa6.11□□□□□ -1.43
EDEM3-202ENST00000367512 FBN2P35556 2912 aa6.11□□□□□ -1.43
EDEM3-202ENST00000367512 PKD1L1Q8TDX9 2849 aa6.1□□□□□ -1.43
EDEM3-202ENST00000367512 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
EDEM3-202ENST00000367512 HRNRQ86YZ3 2850 aaPredicted RBP6.07□□□□□ -1.44
EDEM3-202ENST00000367512 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
EDEM3-202ENST00000367512 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
EDEM3-202ENST00000367512 AKAP9Q99996 3911 aa6.01□□□□□ -1.45
EDEM3-202ENST00000367512 ANK3Q12955 4377 aaKnown RBP5.99□□□□□ -1.45
EDEM3-202ENST00000367512 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
EDEM3-202ENST00000367512 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
EDEM3-202ENST00000367512 KRTAP12-3P60328 96 aa5.9□□□□□ -1.47
EDEM3-202ENST00000367512 KRTAP10-5P60370 271 aa5.9□□□□□ -1.47
EDEM3-202ENST00000367512 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
EDEM3-202ENST00000367512 HUWE1Q7Z6Z7 4374 aaKnown RBP5.86□□□□□ -1.47
EDEM3-202ENST00000367512 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
EDEM3-202ENST00000367512 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
EDEM3-202ENST00000367512 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
EDEM3-202ENST00000367512 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.48
EDEM3-202ENST00000367512 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
EDEM3-202ENST00000367512 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
EDEM3-202ENST00000367512 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
EDEM3-202ENST00000367512 MT1HL1P0DM35 61 aa5.66□□□□□ -1.5
EDEM3-202ENST00000367512 COL7A1Q02388 2944 aa5.6□□□□□ -1.51
EDEM3-202ENST00000367512 ZNF469Q96JG9 3925 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms