RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
CNIH4-201ENST00000366856 DOPEY2Q9Y3R5 2298 aa0.86□□□□□ -2.27
CNIH4-201ENST00000366856 CRYBG3Q68DQ2 2970 aa0.86□□□□□ -2.27
CNIH4-201ENST00000366856 PCNX1Q96RV3 2341 aa0.86□□□□□ -2.27
CNIH4-201ENST00000366856 H0Y9P7 68 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 MAP1BP46821 2468 aaKnown RBP0.85□□□□□ -2.27
CNIH4-201ENST00000366856 HAMPP81172 84 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 COX17Q14061 63 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 ADGRG4Q8IZF6 3080 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 DEFB105AQ8NG35 78 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 SPRR4Q96PI1 79 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 SMR3AQ99954 134 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 PLAC8Q9NZF1 115 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 POLQO75417 2590 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 WNK2Q9Y3S1 2297 aa0.85□□□□□ -2.27
CNIH4-201ENST00000366856 CSMD2Q7Z408 3487 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 GCN1Q92616 2671 aaKnown RBP0.84□□□□□ -2.27
CNIH4-201ENST00000366856 MUC3AQ02505 3323 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 ANKHD1Q8IWZ3 2542 aaKnown RBP0.84□□□□□ -2.27
CNIH4-201ENST00000366856 FRAS1Q86XX4 4008 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 TEX15Q9BXT5 2789 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 ANKRD17O75179 2603 aaKnown RBP0.84□□□□□ -2.27
CNIH4-201ENST00000366856 TRBV7-4A0A0J9YYF1 115 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 LINC00959A0A1B0GUT2 108 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 NREPQ16612 68 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 KLK9Q2XQG4 91 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 DEFB114Q30KQ6 69 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 USMG5Q96IX5 58 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 LINC00472Q9H8W2 130 aa0.84□□□□□ -2.27
CNIH4-201ENST00000366856 MAP1AP78559 2803 aaPredicted RBP0.84□□□□□ -2.28
CNIH4-201ENST00000366856 NIPBLQ6KC79 2804 aaeCLIP0.84□□□□□ -2.28
CNIH4-201ENST00000366856 TLN1Q9Y490 2541 aaKnown RBP0.84□□□□□ -2.28
CNIH4-201ENST00000366856 FLNCQ14315 2725 aa0.84□□□□□ -2.28
CNIH4-201ENST00000366856 CFAP46Q8IYW2 2715 aa0.84□□□□□ -2.28
CNIH4-201ENST00000366856 CNOT1A5YKK6 2376 aaKnown RBP0.84□□□□□ -2.28
CNIH4-201ENST00000366856 TENM4Q6N022 2769 aa0.84□□□□□ -2.28
CNIH4-201ENST00000366856 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.28
CNIH4-201ENST00000366856 IGSF10Q6WRI0 2623 aa0.84□□□□□ -2.28
CNIH4-201ENST00000366856 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 HIVEP1P15822 2718 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 ZANQ9Y493 2812 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 H3BUA1 57 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 NDUFB1O75438 58 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 COX7BP24311 80 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 LELP1Q5T871 98 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 WFDC10BQ8IUB3 73 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 WFDC13Q8IUB5 93 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 C6orf48Q9UBA6 75 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 CELSR2Q9HCU4 2923 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.83□□□□□ -2.283e-14■■■■■ 53.1
CNIH4-201ENST00000366856 CHD8Q9HCK8 2581 aa0.83□□□□□ -2.28
CNIH4-201ENST00000366856 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
CNIH4-201ENST00000366856 AKAP6Q13023 2319 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 COL12A1Q99715 3063 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 A0A096LNI7 61 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 K7EQZ3 153 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 UBL5Q9BZL1 73 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 CENPEQ02224 2701 aa0.82□□□□□ -2.28
CNIH4-201ENST00000366856 TPRP12270 2363 aaKnown RBP0.82□□□□□ -2.28
CNIH4-201ENST00000366856 GVINP1Q7Z2Y8 2422 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 MXRA5Q9NR99 2828 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 ALMS1Q8TCU4 4167 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 SPTBN4Q9H254 2564 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 OTOGQ6ZRI0 2925 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 DNAH1Q9P2D7 4330 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 H0YGX0 51 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 PRLHP81277 87 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 Q8IZM0 81 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 PKD1L2Q7Z442 2459 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 UBR5O95071 2799 aaPredicted RBP0.81□□□□□ -2.28
CNIH4-201ENST00000366856 LRRK2Q5S007 2527 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 USP9XQ93008 2570 aaPredicted RBP0.81□□□□□ -2.28
CNIH4-201ENST00000366856 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
CNIH4-201ENST00000366856 ACACAQ13085 2346 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 WNK1Q9H4A3 2382 aa0.81□□□□□ -2.28
CNIH4-201ENST00000366856 SPTA1P02549 2419 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 SPG11Q96JI7 2443 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 SPTAN1Q13813 2472 aaKnown RBP0.8□□□□□ -2.28
CNIH4-201ENST00000366856 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 USP24Q9UPU5 2620 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 A0A1B0GU69 56 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 NBASA2RRP1 2371 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 CACNA1HO95180 2353 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 PDZD2O15018 2839 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 NF1P21359 2839 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 TRRAPQ9Y4A5 3859 aa0.8□□□□□ -2.28
CNIH4-201ENST00000366856 NBEAL2Q6ZNJ1 2754 aa0.79□□□□□ -2.28
CNIH4-201ENST00000366856 VWFP04275 2813 aa0.79□□□□□ -2.28
CNIH4-201ENST00000366856 PTPN13Q12923 2485 aa0.79□□□□□ -2.28
CNIH4-201ENST00000366856 USP9YO00507 2555 aaPredicted RBP0.79□□□□□ -2.28
CNIH4-201ENST00000366856 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
CNIH4-201ENST00000366856 PRO0255Q9UI72 69 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms