RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
RNU4-4P-201ENST00000364588 USH2AO75445 5202 aa2.61□□□□□ -1.99
RNU4-4P-201ENST00000364588 H3BUT2 72 aa2.61□□□□□ -1.99
RNU4-4P-201ENST00000364588 LST1O00453 97 aa2.61□□□□□ -1.99
RNU4-4P-201ENST00000364588 TRBV20-1A0A075B6N2 111 aa2.6□□□□□ -1.99
RNU4-4P-201ENST00000364588 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
RNU4-4P-201ENST00000364588 SNHG12Q9BXW3 62 aa2.6□□□□□ -1.99
RNU4-4P-201ENST00000364588 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 MT2AP02795 61 aa2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 COA6Q5JTJ3 125 aaKnown RBP2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 C20orf166-AS1Q96NR2 134 aa2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 C12orf57Q99622 126 aa2.59□□□□□ -1.99
RNU4-4P-201ENST00000364588 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
RNU4-4P-201ENST00000364588 A8MUU9 505 aa2.58□□□□□ -2
RNU4-4P-201ENST00000364588 FAM236CP0DP71 79 aa2.58□□□□□ -2
RNU4-4P-201ENST00000364588 PP632Q6XCG6 107 aa2.58□□□□□ -2
RNU4-4P-201ENST00000364588 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
RNU4-4P-201ENST00000364588 A0A087WSZ3 146 aa2.57□□□□□ -2
RNU4-4P-201ENST00000364588 MT1FP04733 61 aa2.57□□□□□ -2
RNU4-4P-201ENST00000364588 PPDPFLQ8WWR9 84 aa2.57□□□□□ -2
RNU4-4P-201ENST00000364588 SS18L2Q9UHA2 77 aa2.57□□□□□ -2
RNU4-4P-201ENST00000364588 KRTAP10-10P60014 251 aa2.56□□□□□ -2
RNU4-4P-201ENST00000364588 BVES-AS1Q5T3Y7 98 aa2.56□□□□□ -2
RNU4-4P-201ENST00000364588 TEN1Q86WV5 123 aa2.56□□□□□ -2
RNU4-4P-201ENST00000364588 SIGMAR1Q99720 223 aa2.56□□□□□ -2
RNU4-4P-201ENST00000364588 HSBP1L1C9JCN9 74 aa2.55□□□□□ -2
RNU4-4P-201ENST00000364588 HIST1H4GQ99525 98 aa2.55□□□□□ -2
RNU4-4P-201ENST00000364588 H3BMG7 143 aa2.54□□□□□ -2
RNU4-4P-201ENST00000364588 HRES1P13985 223 aa2.54□□□□□ -2
RNU4-4P-201ENST00000364588 RBM12B-AS1Q9P1G2 102 aa2.54□□□□□ -2
RNU4-4P-201ENST00000364588 A0A1W2PNM2 257 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 IGKV4-1P06312 121 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 FABP2P12104 132 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 S100A2P29034 98 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 LINC00313P59037 77 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 HIST3H2BBQ8N257 126 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 HIST1H2BLQ99880 126 aa2.53□□□□□ -2
RNU4-4P-201ENST00000364588 A0A1B0GV72 72 aa2.52□□□□□ -2.01
RNU4-4P-201ENST00000364588 SNCGO76070 127 aa2.52□□□□□ -2.01
RNU4-4P-201ENST00000364588 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
RNU4-4P-201ENST00000364588 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
RNU4-4P-201ENST00000364588 H0YGX0 51 aa2.51□□□□□ -2.01
RNU4-4P-201ENST00000364588 COX8AP10176 69 aa2.51□□□□□ -2.01
RNU4-4P-201ENST00000364588 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
RNU4-4P-201ENST00000364588 A0A0B4J2C4 111 aa2.5□□□□□ -2.01
RNU4-4P-201ENST00000364588 C14orf144Q96I85 54 aa2.5□□□□□ -2.01
RNU4-4P-201ENST00000364588 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
RNU4-4P-201ENST00000364588 TRBV7-4A0A0J9YYF1 115 aa2.49□□□□□ -2.01
RNU4-4P-201ENST00000364588 ANKRD29Q8N6D5 301 aa2.49□□□□□ -2.01
RNU4-4P-201ENST00000364588 A0A1B0GX51 115 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 DLEU1O43261 78 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 S100A6P06703 90 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 MTURNQ8N3F0 131 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 LINC00472Q9H8W2 130 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 LINC00846Q9NV44 126 aa2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
RNU4-4P-201ENST00000364588 DNAL4O96015 105 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 TRACP01848 142 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 CCKP06307 115 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 SPINK7P58062 85 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 C2orf91Q6ZV80 131 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 HIGD1BQ9P298 99 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 PRO1854Q9UHT4 67 aa2.47□□□□□ -2.01
RNU4-4P-201ENST00000364588 A0A1B0GVX0 72 aa2.46□□□□□ -2.02
RNU4-4P-201ENST00000364588 C8orf87E5RJ46 101 aa2.46□□□□□ -2.02
RNU4-4P-201ENST00000364588 FXYD2P54710 66 aa2.46□□□□□ -2.02
RNU4-4P-201ENST00000364588 SPATA45Q537H7 98 aa2.46□□□□□ -2.02
RNU4-4P-201ENST00000364588 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
RNU4-4P-201ENST00000364588 A8MWP4 228 aa2.45□□□□□ -2.02
RNU4-4P-201ENST00000364588 PSMB2P49721 201 aa2.45□□□□□ -2.02
RNU4-4P-201ENST00000364588 WFDC13Q8IUB5 93 aa2.45□□□□□ -2.02
RNU4-4P-201ENST00000364588 TMEM256-PLSCR3K7ERE1 68 aa2.44□□□□□ -2.02
RNU4-4P-201ENST00000364588 K7ERJ3 54 aa2.44□□□□□ -2.02
RNU4-4P-201ENST00000364588 VAMP8Q9BV40 100 aa2.44□□□□□ -2.02
RNU4-4P-201ENST00000364588 H3BQ85 93 aa2.43□□□□□ -2.02
RNU4-4P-201ENST00000364588 S100A1P23297 94 aa2.43□□□□□ -2.02
RNU4-4P-201ENST00000364588 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
RNU4-4P-201ENST00000364588 LYRM7Q5U5X0 104 aa2.43□□□□□ -2.02
RNU4-4P-201ENST00000364588 COX6CP09669 75 aa2.42□□□□□ -2.02
RNU4-4P-201ENST00000364588 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
RNU4-4P-201ENST00000364588 J3KT08 172 aa2.41□□□□□ -2.02
RNU4-4P-201ENST00000364588 NDUFB1O75438 58 aa2.41□□□□□ -2.02
RNU4-4P-201ENST00000364588 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
RNU4-4P-201ENST00000364588 DSCR8Q96T75 97 aa2.41□□□□□ -2.02
RNU4-4P-201ENST00000364588 C9JAW5 83 aa2.4□□□□□ -2.03
RNU4-4P-201ENST00000364588 HSD52Q0P140 79 aa2.4□□□□□ -2.03
RNU4-4P-201ENST00000364588 Q6ZQT0 140 aa2.4□□□□□ -2.03
RNU4-4P-201ENST00000364588 C8orf17Q9NRJ1 99 aa2.4□□□□□ -2.03
RNU4-4P-201ENST00000364588 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
RNU4-4P-201ENST00000364588 SCGB1C2P0DMR2 95 aa2.39□□□□□ -2.03
RNU4-4P-201ENST00000364588 BAALC-AS2P0C853 105 aa2.38□□□□□ -2.03
RNU4-4P-201ENST00000364588 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
RNU4-4P-201ENST00000364588 NDUFS5O43920 106 aa2.36□□□□□ -2.03
RNU4-4P-201ENST00000364588 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
RNU4-4P-201ENST00000364588 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
RNU4-4P-201ENST00000364588 PYY3Q5JQD4 70 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms