RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 RPS29P62273 56 aaKnown RBP1.75□□□□□ -2.13
RNU6-249P-201ENST00000363016 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
RNU6-249P-201ENST00000363016 USP24Q9UPU5 2620 aa1.75□□□□□ -2.13
RNU6-249P-201ENST00000363016 MAP1AP78559 2803 aaPredicted RBP1.75□□□□□ -2.13
RNU6-249P-201ENST00000363016 PRUNE2Q8WUY3 3088 aa1.74□□□□□ -2.13
RNU6-249P-201ENST00000363016 PDZD2O15018 2839 aa1.74□□□□□ -2.13
RNU6-249P-201ENST00000363016 USP9YO00507 2555 aaPredicted RBP1.73□□□□□ -2.13
RNU6-249P-201ENST00000363016 NCOR2Q9Y618 2525 aa1.73□□□□□ -2.13
RNU6-249P-201ENST00000363016 BDP1A6H8Y1 2624 aa1.72□□□□□ -2.13
RNU6-249P-201ENST00000363016 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
RNU6-249P-201ENST00000363016 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
RNU6-249P-201ENST00000363016 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
RNU6-249P-201ENST00000363016 MYCBP2O75592 4640 aa1.71□□□□□ -2.14
RNU6-249P-201ENST00000363016 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
RNU6-249P-201ENST00000363016 DCHS2Q6V1P9 2916 aa1.71□□□□□ -2.14
RNU6-249P-201ENST00000363016 ZFHX4Q86UP3 3567 aa1.7□□□□□ -2.14
RNU6-249P-201ENST00000363016 HTN3P15516 51 aa1.7□□□□□ -2.14
RNU6-249P-201ENST00000363016 APCP25054 2843 aa1.7□□□□□ -2.14
RNU6-249P-201ENST00000363016 TRIOO75962 3097 aa1.7□□□□□ -2.14
RNU6-249P-201ENST00000363016 BOD1L1Q8NFC6 3051 aa1.7□□□□□ -2.14
RNU6-249P-201ENST00000363016 CSMD3Q7Z407 3707 aa1.69□□□□□ -2.14
RNU6-249P-201ENST00000363016 NF1P21359 2839 aa1.69□□□□□ -2.14
RNU6-249P-201ENST00000363016 ITPR1Q14643 2758 aa1.69□□□□□ -2.14
RNU6-249P-201ENST00000363016 LRBAP50851 2863 aa1.69□□□□□ -2.14
RNU6-249P-201ENST00000363016 COL7A1Q02388 2944 aa1.69□□□□□ -2.14
RNU6-249P-201ENST00000363016 PIEZO1Q92508 2521 aa1.68□□□□□ -2.14
RNU6-249P-201ENST00000363016 PTPN13Q12923 2485 aa1.68□□□□□ -2.14
RNU6-249P-201ENST00000363016 C5orf42Q9H799 3197 aa1.68□□□□□ -2.14
RNU6-249P-201ENST00000363016 CACNA1AO00555 2505 aa1.68□□□□□ -2.14
RNU6-249P-201ENST00000363016 LRRK2Q5S007 2527 aa1.68□□□□□ -2.14
RNU6-249P-201ENST00000363016 ZZEF1O43149 2961 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 FLNCQ14315 2725 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 SACSQ9NZJ4 4579 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 KRTAP4-11Q9BYQ6 195 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 KRTAP4-5Q9BYR2 181 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 EPG5Q9HCE0 2579 aa1.66□□□□□ -2.14
RNU6-249P-201ENST00000363016 GCN1Q92616 2671 aaKnown RBP1.65□□□□□ -2.14
RNU6-249P-201ENST00000363016 NIPBLQ6KC79 2804 aaeCLIP1.65□□□□□ -2.14
RNU6-249P-201ENST00000363016 ANKHD1Q8IWZ3 2542 aaKnown RBP1.65□□□□□ -2.15
RNU6-249P-201ENST00000363016 ATMQ13315 3056 aa1.64□□□□□ -2.15
RNU6-249P-201ENST00000363016 DNAH12Q6ZR08 3092 aa1.64□□□□□ -2.15
RNU6-249P-201ENST00000363016 SMR3AQ99954 134 aa1.64□□□□□ -2.15
RNU6-249P-201ENST00000363016 FAM186AA6NE01 2351 aa1.64□□□□□ -2.15
RNU6-249P-201ENST00000363016 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 RELNP78509 3460 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 HTTP42858 3142 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 HELZ2Q9BYK8 2649 aaKnown RBP1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 LYSTQ99698 3801 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 DMXL1Q9Y485 3027 aa1.63□□□□□ -2.15
RNU6-249P-201ENST00000363016 DNAH8Q96JB1 4490 aa1.62□□□□□ -2.15
RNU6-249P-201ENST00000363016 KRTAP8-1Q8IUC2 63 aa1.62□□□□□ -2.15
RNU6-249P-201ENST00000363016 KMT2AQ03164 3969 aa1.61□□□□□ -2.15
RNU6-249P-201ENST00000363016 RIF1Q5UIP0 2472 aaKnown RBP1.61□□□□□ -2.15
RNU6-249P-201ENST00000363016 HIVEP3Q5T1R4 2406 aa1.6□□□□□ -2.15
RNU6-249P-201ENST00000363016 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
RNU6-249P-201ENST00000363016 SETXQ7Z333 2677 aaKnown RBP1.6□□□□□ -2.15
RNU6-249P-201ENST00000363016 SRCAPQ6ZRS2 3230 aa1.6□□□□□ -2.15
RNU6-249P-201ENST00000363016 U3KQA8 63 aa1.6□□□□□ -2.15
RNU6-249P-201ENST00000363016 PRKDCP78527 4128 aaKnown RBP1.59□□□□□ -2.15
RNU6-249P-201ENST00000363016 UTP20O75691 2785 aaKnown RBP1.59□□□□□ -2.15
RNU6-249P-201ENST00000363016 DMXL2Q8TDJ6 3036 aa1.59□□□□□ -2.15
RNU6-249P-201ENST00000363016 FBN2P35556 2912 aa1.59□□□□□ -2.15
RNU6-249P-201ENST00000363016 CHD8Q9HCK8 2581 aa1.59□□□□□ -2.15
RNU6-249P-201ENST00000363016 MKI67P46013 3256 aaKnown RBP1.59□□□□□ -2.16
RNU6-249P-201ENST00000363016 DNAH3Q8TD57 4116 aa1.58□□□□□ -2.16
RNU6-249P-201ENST00000363016 BSNQ9UPA5 3926 aa1.58□□□□□ -2.16
RNU6-249P-201ENST00000363016 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
RNU6-249P-201ENST00000363016 TACC2O95359 2948 aa1.57□□□□□ -2.16
RNU6-249P-201ENST00000363016 MTORP42345 2549 aa1.57□□□□□ -2.16
RNU6-249P-201ENST00000363016 SZT2Q5T011 3432 aa1.56□□□□□ -2.16
RNU6-249P-201ENST00000363016 CFAP46Q8IYW2 2715 aa1.56□□□□□ -2.16
RNU6-249P-201ENST00000363016 ANK2Q01484 3957 aa1.56□□□□□ -2.16
RNU6-249P-201ENST00000363016 SONP18583 2426 aaKnown RBP1.56□□□□□ -2.16
RNU6-249P-201ENST00000363016 SPENQ96T58 3664 aaKnown RBP1.55□□□□□ -2.16
RNU6-249P-201ENST00000363016 CELSR3Q9NYQ7 3312 aa1.55□□□□□ -2.16
RNU6-249P-201ENST00000363016 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
RNU6-249P-201ENST00000363016 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
RNU6-249P-201ENST00000363016 SPG11Q96JI7 2443 aa1.55□□□□□ -2.16
RNU6-249P-201ENST00000363016 DNAH7Q8WXX0 4024 aa1.54□□□□□ -2.16
RNU6-249P-201ENST00000363016 DEFB4AO15263 64 aa1.53□□□□□ -2.16
RNU6-249P-201ENST00000363016 TGP01266 2768 aa1.53□□□□□ -2.16
RNU6-249P-201ENST00000363016 DCHS1Q96JQ0 3298 aa1.53□□□□□ -2.16
RNU6-249P-201ENST00000363016 TNXBP22105 4242 aa1.53□□□□□ -2.16
RNU6-249P-201ENST00000363016 CFAP47Q6ZTR5 3102 aa1.53□□□□□ -2.17
RNU6-249P-201ENST00000363016 PKD1L1Q8TDX9 2849 aa1.53□□□□□ -2.17
RNU6-249P-201ENST00000363016 PRM1P04553 51 aa1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 FREM2Q5SZK8 3169 aa1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 WDFY4Q6ZS81 3184 aa1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 ZANQ9Y493 2812 aa1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 DMDP11532 3685 aa1.52□□□□□ -2.17
RNU6-249P-201ENST00000363016 ACANP16112 2415 aa1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 KALRNO60229 2985 aa1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 DNAH2Q9P225 4427 aa1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 FRAS1Q86XX4 4008 aa1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 GOLGB1Q14789 3259 aaKnown RBP1.51□□□□□ -2.17
RNU6-249P-201ENST00000363016 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
RNU6-249P-201ENST00000363016 CENPEQ02224 2701 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms