RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 M0QZ58 72 aa7.78□□□□□ -1.16
SMC5-201ENST00000361138 DMDP11532 3685 aa7.77□□□□□ -1.17
SMC5-201ENST00000361138 ITPR2Q14571 2701 aa7.77□□□□□ -1.17
SMC5-201ENST00000361138 A8MUU9 505 aa7.76□□□□□ -1.17
SMC5-201ENST00000361138 TACC2O95359 2948 aa7.75□□□□□ -1.17
SMC5-201ENST00000361138 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
SMC5-201ENST00000361138 APCP25054 2843 aa7.73□□□□□ -1.17
SMC5-201ENST00000361138 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
SMC5-201ENST00000361138 NDUFAF8A1L188 74 aa7.72□□□□□ -1.17
SMC5-201ENST00000361138 ITPR1Q14643 2758 aa7.72□□□□□ -1.17
SMC5-201ENST00000361138 Q5VSD8 79 aa7.72□□□□□ -1.17
SMC5-201ENST00000361138 CFAP47Q6ZTR5 3102 aa7.71□□□□□ -1.18
SMC5-201ENST00000361138 UBR5O95071 2799 aaPredicted RBP7.71□□□□□ -1.18
SMC5-201ENST00000361138 WDFY3Q8IZQ1 3526 aa7.67□□□□□ -1.18
SMC5-201ENST00000361138 ASPMQ8IZT6 3477 aa7.66□□□□□ -1.18
SMC5-201ENST00000361138 HRNRQ86YZ3 2850 aaPredicted RBP7.65□□□□□ -1.18
SMC5-201ENST00000361138 MUC3AQ02505 3323 aa7.65□□□□□ -1.19
SMC5-201ENST00000361138 H0YAA0 97 aa7.64□□□□□ -1.19
SMC5-201ENST00000361138 NOTCH1P46531 2555 aa7.64□□□□□ -1.19
SMC5-201ENST00000361138 LAMA5O15230 3695 aa7.63□□□□□ -1.19
SMC5-201ENST00000361138 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
SMC5-201ENST00000361138 RELNP78509 3460 aa7.61□□□□□ -1.19
SMC5-201ENST00000361138 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.2
SMC5-201ENST00000361138 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
SMC5-201ENST00000361138 ZFHX4Q86UP3 3567 aa7.57□□□□□ -1.2
SMC5-201ENST00000361138 KMT2BQ9UMN6 2715 aaPredicted RBP7.57□□□□□ -1.2
SMC5-201ENST00000361138 NBEAL1Q6ZS30 2694 aa7.56□□□□□ -1.2
SMC5-201ENST00000361138 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
SMC5-201ENST00000361138 CELSR2Q9HCU4 2923 aa7.52□□□□□ -1.21
SMC5-201ENST00000361138 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.21
SMC5-201ENST00000361138 KRTAP13-3Q3SY46 172 aa7.51□□□□□ -1.21
SMC5-201ENST00000361138 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
SMC5-201ENST00000361138 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
SMC5-201ENST00000361138 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
SMC5-201ENST00000361138 TENM4Q6N022 2769 aa7.47□□□□□ -1.21
SMC5-201ENST00000361138 ASH1LQ9NR48 2969 aaKnown RBP7.47□□□□□ -1.21
SMC5-201ENST00000361138 M0R2T5 61 aa7.46□□□□□ -1.21
SMC5-201ENST00000361138 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
SMC5-201ENST00000361138 ZANQ9Y493 2812 aa7.45□□□□□ -1.22
SMC5-201ENST00000361138 FBN2P35556 2912 aa7.44□□□□□ -1.22
SMC5-201ENST00000361138 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
SMC5-201ENST00000361138 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
SMC5-201ENST00000361138 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
SMC5-201ENST00000361138 DCHS2Q6V1P9 2916 aa7.34□□□□□ -1.23
SMC5-201ENST00000361138 PDZD2O15018 2839 aa7.31□□□□□ -1.24
SMC5-201ENST00000361138 P0C880 135 aa7.3□□□□□ -1.24
SMC5-201ENST00000361138 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
SMC5-201ENST00000361138 NIPBLQ6KC79 2804 aaeCLIP7.26□□□□□ -1.25
SMC5-201ENST00000361138 BSNQ9UPA5 3926 aa7.25□□□□□ -1.25
SMC5-201ENST00000361138 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
SMC5-201ENST00000361138 XP32Q5T750 250 aa7.23□□□□□ -1.25
SMC5-201ENST00000361138 TNP1P09430 55 aa7.22□□□□□ -1.25
SMC5-201ENST00000361138 FLG2Q5D862 2391 aaPredicted RBP7.22□□□□□ -1.25
SMC5-201ENST00000361138 ANK3Q12955 4377 aaKnown RBP7.2□□□□□ -1.26
SMC5-201ENST00000361138 SPENQ96T58 3664 aaKnown RBP7.18□□□□□ -1.26
SMC5-201ENST00000361138 NF1P21359 2839 aa7.15□□□□□ -1.27
SMC5-201ENST00000361138 SVEP1Q4LDE5 3571 aa7.15□□□□□ -1.27
SMC5-201ENST00000361138 OTOGQ6ZRI0 2925 aa7.13□□□□□ -1.27
SMC5-201ENST00000361138 MXRA5Q9NR99 2828 aa7.11□□□□□ -1.27
SMC5-201ENST00000361138 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
SMC5-201ENST00000361138 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
SMC5-201ENST00000361138 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
SMC5-201ENST00000361138 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
SMC5-201ENST00000361138 ZFHX3Q15911 3703 aa7.03□□□□□ -1.28
SMC5-201ENST00000361138 CELSR1Q9NYQ6 3014 aa7.02□□□□□ -1.29
SMC5-201ENST00000361138 CSMD2Q7Z408 3487 aa7.01□□□□□ -1.29
SMC5-201ENST00000361138 A0A1B0GVY2 172 aa6.96□□□□□ -1.29
SMC5-201ENST00000361138 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
SMC5-201ENST00000361138 FBN1P35555 2871 aaKnown RBP6.95□□□□□ -1.3
SMC5-201ENST00000361138 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
SMC5-201ENST00000361138 TGP01266 2768 aa6.93□□□□□ -1.3
SMC5-201ENST00000361138 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.3
SMC5-201ENST00000361138 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
SMC5-201ENST00000361138 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
SMC5-201ENST00000361138 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
SMC5-201ENST00000361138 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
SMC5-201ENST00000361138 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
SMC5-201ENST00000361138 AKAP9Q99996 3911 aa6.75□□□□□ -1.33
SMC5-201ENST00000361138 VWFP04275 2813 aa6.75□□□□□ -1.33
SMC5-201ENST00000361138 VPS13CQ709C8 3753 aa6.73□□□□□ -1.33
SMC5-201ENST00000361138 HUWE1Q7Z6Z7 4374 aaKnown RBP6.68□□□□□ -1.34
SMC5-201ENST00000361138 CUBNO60494 3623 aa6.68□□□□□ -1.34
SMC5-201ENST00000361138 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.34
SMC5-201ENST00000361138 ZNF469Q96JG9 3925 aaPredicted RBP6.64□□□□□ -1.35
SMC5-201ENST00000361138 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
SMC5-201ENST00000361138 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
SMC5-201ENST00000361138 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
SMC5-201ENST00000361138 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
SMC5-201ENST00000361138 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
SMC5-201ENST00000361138 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
SMC5-201ENST00000361138 DNAH9Q9NYC9 4486 aa6.41□□□□□ -1.38
SMC5-201ENST00000361138 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
SMC5-201ENST00000361138 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
SMC5-201ENST00000361138 INE1O15225 51 aa6.3□□□□□ -1.4
SMC5-201ENST00000361138 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
SMC5-201ENST00000361138 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
SMC5-201ENST00000361138 MEGF8Q7Z7M0 2845 aa6.27□□□□□ -1.41
SMC5-201ENST00000361138 DNAH1Q9P2D7 4330 aa6.25□□□□□ -1.41
SMC5-201ENST00000361138 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
SMC5-201ENST00000361138 DNAH10Q8IVF4 4471 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms