RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
CDC42SE2-201ENST00000360515 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
CDC42SE2-201ENST00000360515 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
CDC42SE2-201ENST00000360515 VPREB1P12018 145 aa3.15□□□□□ -1.91
CDC42SE2-201ENST00000360515 NDUFC1O43677 76 aa3.15□□□□□ -1.91
CDC42SE2-201ENST00000360515 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
CDC42SE2-201ENST00000360515 Q8NBF4 154 aa3.15□□□□□ -1.91
CDC42SE2-201ENST00000360515 COX17Q14061 63 aa3.14□□□□□ -1.91
CDC42SE2-201ENST00000360515 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
CDC42SE2-201ENST00000360515 FAM218AQ96MZ4 157 aa3.14□□□□□ -1.91
CDC42SE2-201ENST00000360515 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 IGLV4-3A0A075B6K6 122 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 OBSCN-AS1Q96MR7 158 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 TRBV10-3A0A0K0K1G6 114 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 ANAPC11Q9NYG5 84 aa3.13□□□□□ -1.91
CDC42SE2-201ENST00000360515 H3BS24 57 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 PRYO14603 147 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 SPRR1BP22528 89 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 UBE2AP49459 152 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
CDC42SE2-201ENST00000360515 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
CDC42SE2-201ENST00000360515 LINC00308Q8TCZ7 52 aa3.11□□□□□ -1.91
CDC42SE2-201ENST00000360515 ZNF625Q96I27 306 aaPredicted RBP3.11□□□□□ -1.91
CDC42SE2-201ENST00000360515 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
CDC42SE2-201ENST00000360515 NCR3O14931 201 aa3.1□□□□□ -1.91
CDC42SE2-201ENST00000360515 MT1FP04733 61 aa3.1□□□□□ -1.91
CDC42SE2-201ENST00000360515 Q1T7F1 81 aa3.09□□□□□ -1.91
CDC42SE2-201ENST00000360515 IGLV5-39A0A0G2JS06 123 aa3.09□□□□□ -1.92
CDC42SE2-201ENST00000360515 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.92
CDC42SE2-201ENST00000360515 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
CDC42SE2-201ENST00000360515 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
CDC42SE2-201ENST00000360515 UBL5Q9BZL1 73 aa3.08□□□□□ -1.92
CDC42SE2-201ENST00000360515 SMIM1B2RUZ4 78 aa3.08□□□□□ -1.92
CDC42SE2-201ENST00000360515 C8orf87E5RJ46 101 aa3.08□□□□□ -1.92
CDC42SE2-201ENST00000360515 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
CDC42SE2-201ENST00000360515 LIMD2Q9BT23 127 aa3.08□□□□□ -1.92
CDC42SE2-201ENST00000360515 TMEM254Q8TBM7 123 aa3.07□□□□□ -1.92
CDC42SE2-201ENST00000360515 TMEM256-PLSCR3K7ERE1 68 aa3.07□□□□□ -1.92
CDC42SE2-201ENST00000360515 PSPHP1O15172 72 aa3.07□□□□□ -1.92
CDC42SE2-201ENST00000360515 NDUFS5O43920 106 aa3.07□□□□□ -1.92
CDC42SE2-201ENST00000360515 H0YGX0 51 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 Q6ZVQ6 151 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 hDV103S1A0JD37 113 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 A8MU10 97 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 ZNF73O43830 326 aaPredicted RBP3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 ORMDL1Q9P0S3 153 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 JMJD7-PLA2G4BH0Y9G9 81 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 ERC2-IT1O76042 136 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 Q75L30 129 aa3.06□□□□□ -1.92
CDC42SE2-201ENST00000360515 NKAPP1Q8N9T2 125 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 XAGE1AQ9HD64 81 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 M0R2T5 61 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 PRLHP81277 87 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 NREPQ16612 68 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 COX7B2Q8TF08 81 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 RNASE13Q5GAN3 156 aaKnown RBP3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 Q8NDZ9 215 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
CDC42SE2-201ENST00000360515 CDKN2A-AS1Q9UH64 79 aa3.04□□□□□ -1.92
CDC42SE2-201ENST00000360515 SND1-IT1Q9HBX3 110 aa3.04□□□□□ -1.92
CDC42SE2-201ENST00000360515 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
CDC42SE2-201ENST00000360515 A8MUN3 132 aa3.03□□□□□ -1.92
CDC42SE2-201ENST00000360515 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
CDC42SE2-201ENST00000360515 CXCL6P80162 114 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 A6NN06 94 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 BPY2O14599 106 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 LCA10Q71F78 164 aa3.02□□□□□ -1.93
CDC42SE2-201ENST00000360515 Q5VV11 94 aa3.01□□□□□ -1.93
CDC42SE2-201ENST00000360515 C7orf65Q6ZTY9 151 aa3.01□□□□□ -1.93
CDC42SE2-201ENST00000360515 Q6ZQT0 140 aa3.01□□□□□ -1.93
CDC42SE2-201ENST00000360515 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
CDC42SE2-201ENST00000360515 HCG22E2RYF7 251 aa3□□□□□ -1.93
CDC42SE2-201ENST00000360515 C6orf99Q4VX62 202 aa3□□□□□ -1.93
CDC42SE2-201ENST00000360515 OCR1Q9BZK8 76 aa3□□□□□ -1.93
CDC42SE2-201ENST00000360515 IGLV6-57P01721 117 aa3□□□□□ -1.93
CDC42SE2-201ENST00000360515 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 Q6ZRX8 168 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 Q9BRP9 147 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 MOBPQ13875 183 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 LOC110117498A0A087WWA1 95 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
CDC42SE2-201ENST00000360515 C20orf166-AS1Q96NR2 134 aa2.98□□□□□ -1.93
CDC42SE2-201ENST00000360515 CYP4F30PQ9H0H9 118 aa2.96□□□□□ -1.93
CDC42SE2-201ENST00000360515 A8MUU9 505 aa2.96□□□□□ -1.94
CDC42SE2-201ENST00000360515 LINC00158P58513 81 aa2.96□□□□□ -1.94
CDC42SE2-201ENST00000360515 PDE6GP18545 87 aa2.96□□□□□ -1.94
CDC42SE2-201ENST00000360515 SMIM29Q86T20 159 aa2.96□□□□□ -1.94
CDC42SE2-201ENST00000360515 IGKV4-1P06312 121 aa2.95□□□□□ -1.94
CDC42SE2-201ENST00000360515 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
CDC42SE2-201ENST00000360515 A6NED7 52 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms