RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
GABPB1-202ENST00000359031 MP68P56378 58 aa8.77□□□□□ -1.01
GABPB1-202ENST00000359031 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
GABPB1-202ENST00000359031 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
GABPB1-202ENST00000359031 H3BPC8 53 aa8.75□□□□□ -1.01
GABPB1-202ENST00000359031 OXTP01178 125 aa8.75□□□□□ -1.01
GABPB1-202ENST00000359031 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
GABPB1-202ENST00000359031 H0Y9P7 68 aa8.72□□□□□ -1.01
GABPB1-202ENST00000359031 A0A087X002 238 aa8.71□□□□□ -1.02
GABPB1-202ENST00000359031 Q8N1X5 172 aa8.71□□□□□ -1.02
GABPB1-202ENST00000359031 TP53AIP1Q9HCN2 124 aa8.71□□□□□ -1.02
GABPB1-202ENST00000359031 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
GABPB1-202ENST00000359031 HSPG2P98160 4391 aa8.7□□□□□ -1.02
GABPB1-202ENST00000359031 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
GABPB1-202ENST00000359031 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
GABPB1-202ENST00000359031 Q5XG85 94 aa8.68□□□□□ -1.02
GABPB1-202ENST00000359031 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
GABPB1-202ENST00000359031 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
GABPB1-202ENST00000359031 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
GABPB1-202ENST00000359031 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
GABPB1-202ENST00000359031 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
GABPB1-202ENST00000359031 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
GABPB1-202ENST00000359031 LIMD2Q9BT23 127 aa8.62□□□□□ -1.03
GABPB1-202ENST00000359031 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
GABPB1-202ENST00000359031 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
GABPB1-202ENST00000359031 SMIM26A0A096LP01 95 aa8.6□□□□□ -1.03
GABPB1-202ENST00000359031 NDUFS5O43920 106 aa8.6□□□□□ -1.03
GABPB1-202ENST00000359031 HERC1Q15751 4861 aa8.6□□□□□ -1.03
GABPB1-202ENST00000359031 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
GABPB1-202ENST00000359031 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
GABPB1-202ENST00000359031 C1orf195Q5TG92 126 aa8.58□□□□□ -1.04
GABPB1-202ENST00000359031 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
GABPB1-202ENST00000359031 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
GABPB1-202ENST00000359031 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
GABPB1-202ENST00000359031 APOBP04114 4563 aaKnown RBP8.54□□□□□ -1.04
GABPB1-202ENST00000359031 SPINK1P00995 79 aa8.53□□□□□ -1.04
GABPB1-202ENST00000359031 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-202ENST00000359031 LINC00313P59037 77 aa8.52□□□□□ -1.05
GABPB1-202ENST00000359031 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
GABPB1-202ENST00000359031 Q5VSD8 79 aa8.51□□□□□ -1.05
GABPB1-202ENST00000359031 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-202ENST00000359031 PRR4Q16378 134 aa8.5□□□□□ -1.05
GABPB1-202ENST00000359031 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-202ENST00000359031 LOC101927531A0A1B0GV80 90 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 KRTAP13-3Q3SY46 172 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-202ENST00000359031 C4orf26Q17RF5 130 aa8.47□□□□□ -1.05
GABPB1-202ENST00000359031 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-202ENST00000359031 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
GABPB1-202ENST00000359031 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
GABPB1-202ENST00000359031 J3QL48 77 aa8.44□□□□□ -1.06
GABPB1-202ENST00000359031 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
GABPB1-202ENST00000359031 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
GABPB1-202ENST00000359031 Q5W150 140 aa8.43□□□□□ -1.06
GABPB1-202ENST00000359031 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
GABPB1-202ENST00000359031 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
GABPB1-202ENST00000359031 FAT1Q14517 4588 aa8.35□□□□□ -1.07
GABPB1-202ENST00000359031 Q1T7F1 81 aa8.35□□□□□ -1.07
GABPB1-202ENST00000359031 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
GABPB1-202ENST00000359031 COA5Q86WW8 74 aa8.33□□□□□ -1.08
GABPB1-202ENST00000359031 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
GABPB1-202ENST00000359031 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
GABPB1-202ENST00000359031 V9GYY9 64 aa8.31□□□□□ -1.08
GABPB1-202ENST00000359031 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
GABPB1-202ENST00000359031 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
GABPB1-202ENST00000359031 HRES1P13985 223 aa8.25□□□□□ -1.09
GABPB1-202ENST00000359031 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
GABPB1-202ENST00000359031 DMAC1Q96GE9 116 aa8.21□□□□□ -1.09
GABPB1-202ENST00000359031 ACYP2P14621 99 aa8.2□□□□□ -1.1
GABPB1-202ENST00000359031 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
GABPB1-202ENST00000359031 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
GABPB1-202ENST00000359031 A8MUU9 505 aa8.17□□□□□ -1.1
GABPB1-202ENST00000359031 PSPHP1O15172 72 aa8.16□□□□□ -1.1
GABPB1-202ENST00000359031 C7orf65Q6ZTY9 151 aa8.15□□□□□ -1.1
GABPB1-202ENST00000359031 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
GABPB1-202ENST00000359031 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
GABPB1-202ENST00000359031 HMCN2Q8NDA2 5059 aa8.14□□□□□ -1.11
GABPB1-202ENST00000359031 A8MUN3 132 aa8.14□□□□□ -1.11
GABPB1-202ENST00000359031 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
GABPB1-202ENST00000359031 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
GABPB1-202ENST00000359031 Q5VV11 94 aa8.11□□□□□ -1.11
GABPB1-202ENST00000359031 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
GABPB1-202ENST00000359031 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
GABPB1-202ENST00000359031 CHKB-CPT1BH3BT56 60 aa8.09□□□□□ -1.11
GABPB1-202ENST00000359031 Q75L30 129 aa8.06□□□□□ -1.12
GABPB1-202ENST00000359031 TNXBP22105 4242 aa8.04□□□□□ -1.12
GABPB1-202ENST00000359031 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
GABPB1-202ENST00000359031 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
GABPB1-202ENST00000359031 SPINK7P58062 85 aa7.94□□□□□ -1.14
GABPB1-202ENST00000359031 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
GABPB1-202ENST00000359031 A6NED7 52 aa7.92□□□□□ -1.14
GABPB1-202ENST00000359031 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
GABPB1-202ENST00000359031 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
GABPB1-202ENST00000359031 A0A1B0GU69 56 aa7.87□□□□□ -1.15
GABPB1-202ENST00000359031 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
GABPB1-202ENST00000359031 XP32Q5T750 250 aa7.86□□□□□ -1.15
GABPB1-202ENST00000359031 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms