RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 MAP1AP78559 2803 aaPredicted RBP4.45□□□□□ -1.7
CTNND1-201ENST00000358694 SZT2Q5T011 3432 aa4.44□□□□□ -1.7
CTNND1-201ENST00000358694 EYSQ5T1H1 3165 aa4.44□□□□□ -1.7
CTNND1-201ENST00000358694 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
CTNND1-201ENST00000358694 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CTNND1-201ENST00000358694 VCANP13611 3396 aa4.4□□□□□ -1.71
CTNND1-201ENST00000358694 REV3LO60673 3130 aa4.4□□□□□ -1.71
CTNND1-201ENST00000358694 DSPP15924 2871 aaKnown RBP4.38□□□□□ -1.71
CTNND1-201ENST00000358694 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
CTNND1-201ENST00000358694 NBEAQ8NFP9 2946 aa4.38□□□□□ -1.71
CTNND1-201ENST00000358694 VPS13AQ96RL7 3174 aa4.38□□□□□ -1.71
CTNND1-201ENST00000358694 ITPR2Q14571 2701 aa4.36□□□□□ -1.71
CTNND1-201ENST00000358694 MUC3AQ02505 3323 aa4.35□□□□□ -1.71
CTNND1-201ENST00000358694 UBR5O95071 2799 aaPredicted RBP4.35□□□□□ -1.71
CTNND1-201ENST00000358694 SPEGQ15772 3267 aa4.34□□□□□ -1.71
CTNND1-201ENST00000358694 FRYQ5TBA9 3013 aa4.34□□□□□ -1.71
CTNND1-201ENST00000358694 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
CTNND1-201ENST00000358694 FRYLO94915 3013 aa4.32□□□□□ -1.72
CTNND1-201ENST00000358694 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
CTNND1-201ENST00000358694 COL6A3P12111 3177 aa4.3□□□□□ -1.72
CTNND1-201ENST00000358694 LAMA1P25391 3075 aa4.29□□□□□ -1.72
CTNND1-201ENST00000358694 KALRNO60229 2985 aa4.26□□□□□ -1.73
CTNND1-201ENST00000358694 TENM4Q6N022 2769 aa4.25□□□□□ -1.73
CTNND1-201ENST00000358694 CFAP47Q6ZTR5 3102 aa4.25□□□□□ -1.73
CTNND1-201ENST00000358694 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
CTNND1-201ENST00000358694 APCP25054 2843 aa4.24□□□□□ -1.73
CTNND1-201ENST00000358694 TNRC18O15417 2968 aaPredicted RBP4.24□□□□□ -1.73
CTNND1-201ENST00000358694 MYO15AQ9UKN7 3530 aa4.23□□□□□ -1.73
CTNND1-201ENST00000358694 CRYBG3Q68DQ2 2970 aa4.22□□□□□ -1.73
CTNND1-201ENST00000358694 ZZEF1O43149 2961 aa4.21□□□□□ -1.74
CTNND1-201ENST00000358694 ITPR1Q14643 2758 aa4.2□□□□□ -1.74
CTNND1-201ENST00000358694 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
CTNND1-201ENST00000358694 FLNCQ14315 2725 aa4.19□□□□□ -1.74
CTNND1-201ENST00000358694 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
CTNND1-201ENST00000358694 ATMQ13315 3056 aa4.18□□□□□ -1.74
CTNND1-201ENST00000358694 UTP20O75691 2785 aaKnown RBP4.18□□□□□ -1.74
CTNND1-201ENST00000358694 BOD1L1Q8NFC6 3051 aa4.17□□□□□ -1.74
CTNND1-201ENST00000358694 DMXL2Q8TDJ6 3036 aa4.15□□□□□ -1.75
CTNND1-201ENST00000358694 LRBAP50851 2863 aa4.14□□□□□ -1.75
CTNND1-201ENST00000358694 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
CTNND1-201ENST00000358694 ADGRG4Q8IZF6 3080 aa4.13□□□□□ -1.75
CTNND1-201ENST00000358694 TACC2O95359 2948 aa4.12□□□□□ -1.75
CTNND1-201ENST00000358694 INE1O15225 51 aa4.12□□□□□ -1.75
CTNND1-201ENST00000358694 LOC400499M0QZD8 3231 aa4.1□□□□□ -1.75
CTNND1-201ENST00000358694 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
CTNND1-201ENST00000358694 TENM3Q9P273 2699 aa4.09□□□□□ -1.75
CTNND1-201ENST00000358694 ASH1LQ9NR48 2969 aaKnown RBP4.07□□□□□ -1.76
CTNND1-201ENST00000358694 DMDP11532 3685 aa4.07□□□□□ -1.76
CTNND1-201ENST00000358694 TENM1Q9UKZ4 2725 aa4.06□□□□□ -1.76
CTNND1-201ENST00000358694 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
CTNND1-201ENST00000358694 WDFY3Q8IZQ1 3526 aa4.04□□□□□ -1.76
CTNND1-201ENST00000358694 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
CTNND1-201ENST00000358694 DMXL1Q9Y485 3027 aa4.03□□□□□ -1.76
CTNND1-201ENST00000358694 TGP01266 2768 aa4.03□□□□□ -1.76
CTNND1-201ENST00000358694 HRNRQ86YZ3 2850 aaPredicted RBP4.02□□□□□ -1.77
CTNND1-201ENST00000358694 NIPBLQ6KC79 2804 aaeCLIP4□□□□□ -1.771e-6■□□□□ 9
CTNND1-201ENST00000358694 ASPMQ8IZT6 3477 aa4□□□□□ -1.77
CTNND1-201ENST00000358694 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
CTNND1-201ENST00000358694 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
CTNND1-201ENST00000358694 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
CTNND1-201ENST00000358694 ZANQ9Y493 2812 aa3.95□□□□□ -1.78
CTNND1-201ENST00000358694 DCHS1Q96JQ0 3298 aa3.94□□□□□ -1.78
CTNND1-201ENST00000358694 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
CTNND1-201ENST00000358694 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
CTNND1-201ENST00000358694 NF1P21359 2839 aa3.92□□□□□ -1.78
CTNND1-201ENST00000358694 PDZD2O15018 2839 aa3.92□□□□□ -1.78
CTNND1-201ENST00000358694 LAMA5O15230 3695 aa3.91□□□□□ -1.78
CTNND1-201ENST00000358694 DCHS2Q6V1P9 2916 aa3.91□□□□□ -1.78
CTNND1-201ENST00000358694 RELNP78509 3460 aa3.89□□□□□ -1.79
CTNND1-201ENST00000358694 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
CTNND1-201ENST00000358694 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
CTNND1-201ENST00000358694 FBN2P35556 2912 aa3.85□□□□□ -1.79
CTNND1-201ENST00000358694 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
CTNND1-201ENST00000358694 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
CTNND1-201ENST00000358694 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
CTNND1-201ENST00000358694 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
CTNND1-201ENST00000358694 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
CTNND1-201ENST00000358694 NBPF19A0A087WUL8 3843 aa3.79□□□□□ -1.8
CTNND1-201ENST00000358694 MXRA5Q9NR99 2828 aa3.79□□□□□ -1.8
CTNND1-201ENST00000358694 VWFP04275 2813 aa3.78□□□□□ -1.8
CTNND1-201ENST00000358694 CELSR1Q9NYQ6 3014 aa3.76□□□□□ -1.81
CTNND1-201ENST00000358694 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
CTNND1-201ENST00000358694 ZFHX3Q15911 3703 aa3.74□□□□□ -1.81
CTNND1-201ENST00000358694 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
CTNND1-201ENST00000358694 ANK3Q12955 4377 aaKnown RBP3.74□□□□□ -1.81
CTNND1-201ENST00000358694 SMG1Q96Q15 3661 aaKnown RBP3.73□□□□□ -1.81
CTNND1-201ENST00000358694 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
CTNND1-201ENST00000358694 SPENQ96T58 3664 aaKnown RBP3.73□□□□□ -1.81
CTNND1-201ENST00000358694 KRTAP4-5Q9BYR2 181 aa3.72□□□□□ -1.81
CTNND1-201ENST00000358694 CUBNO60494 3623 aa3.71□□□□□ -1.82
CTNND1-201ENST00000358694 SVEP1Q4LDE5 3571 aa3.71□□□□□ -1.82
CTNND1-201ENST00000358694 OTOGQ6ZRI0 2925 aa3.69□□□□□ -1.82
CTNND1-201ENST00000358694 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
CTNND1-201ENST00000358694 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
CTNND1-201ENST00000358694 CSMD2Q7Z408 3487 aa3.6□□□□□ -1.83
CTNND1-201ENST00000358694 FBN1P35555 2871 aaKnown RBP3.59□□□□□ -1.83
CTNND1-201ENST00000358694 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
CTNND1-201ENST00000358694 BSNQ9UPA5 3926 aa3.54□□□□□ -1.84
CTNND1-201ENST00000358694 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
CTNND1-201ENST00000358694 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms