RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 WFDC13Q8IUB5 93 aa7.85□□□□□ -1.15
NFIX-201ENST00000358552 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
NFIX-201ENST00000358552 KRTAP1-4P0C5Y4 121 aa7.84□□□□□ -1.15
NFIX-201ENST00000358552 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
NFIX-201ENST00000358552 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
NFIX-201ENST00000358552 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.16
NFIX-201ENST00000358552 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
NFIX-201ENST00000358552 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
NFIX-201ENST00000358552 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
NFIX-201ENST00000358552 C4orf48Q5BLP8 95 aa7.82□□□□□ -1.16
NFIX-201ENST00000358552 BIRC6Q9NR09 4857 aa7.82□□□□□ -1.16
NFIX-201ENST00000358552 TRAV22A0A0B4J277 110 aa7.81□□□□□ -1.16
NFIX-201ENST00000358552 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
NFIX-201ENST00000358552 V9GYY9 64 aa7.81□□□□□ -1.16
NFIX-201ENST00000358552 LIMD2Q9BT23 127 aa7.81□□□□□ -1.16
NFIX-201ENST00000358552 A0A087X002 238 aa7.8□□□□□ -1.16
NFIX-201ENST00000358552 H0Y9P7 68 aa7.8□□□□□ -1.16
NFIX-201ENST00000358552 DEFB116Q30KQ4 102 aa7.8□□□□□ -1.16
NFIX-201ENST00000358552 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
NFIX-201ENST00000358552 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
NFIX-201ENST00000358552 SPINK1P00995 79 aa7.78□□□□□ -1.16
NFIX-201ENST00000358552 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
NFIX-201ENST00000358552 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
NFIX-201ENST00000358552 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
NFIX-201ENST00000358552 Q1T7F1 81 aa7.77□□□□□ -1.17
NFIX-201ENST00000358552 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
NFIX-201ENST00000358552 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
NFIX-201ENST00000358552 Q96NJ1 140 aa7.75□□□□□ -1.17
NFIX-201ENST00000358552 HSPG2P98160 4391 aa7.75□□□□□ -1.17
NFIX-201ENST00000358552 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
NFIX-201ENST00000358552 MPLKIPQ8TAP9 179 aa7.72□□□□□ -1.17
NFIX-201ENST00000358552 A0A1B0GVX0 72 aa7.7□□□□□ -1.18
NFIX-201ENST00000358552 C1orf195Q5TG92 126 aa7.7□□□□□ -1.18
NFIX-201ENST00000358552 LINC00304Q8N9R0 145 aa7.7□□□□□ -1.18
NFIX-201ENST00000358552 RYR1P21817 5038 aa7.7□□□□□ -1.18
NFIX-201ENST00000358552 FAT1Q14517 4588 aa7.7□□□□□ -1.18
NFIX-201ENST00000358552 Q5VSD8 79 aa7.69□□□□□ -1.18
NFIX-201ENST00000358552 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
NFIX-201ENST00000358552 KIAA1109Q2LD37 5005 aa7.69□□□□□ -1.18
NFIX-201ENST00000358552 Q8N1X5 172 aa7.69□□□□□ -1.18
NFIX-201ENST00000358552 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
NFIX-201ENST00000358552 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
NFIX-201ENST00000358552 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
NFIX-201ENST00000358552 IGLV7-46A0A075B6I9 117 aa7.66□□□□□ -1.18
NFIX-201ENST00000358552 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
NFIX-201ENST00000358552 MRPL34Q9BQ48 92 aaKnown RBP7.64□□□□□ -1.19
NFIX-201ENST00000358552 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
NFIX-201ENST00000358552 PRR4Q16378 134 aa7.61□□□□□ -1.19
NFIX-201ENST00000358552 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
NFIX-201ENST00000358552 NDUFS5O43920 106 aa7.59□□□□□ -1.19
NFIX-201ENST00000358552 LINC00313P59037 77 aa7.58□□□□□ -1.2
NFIX-201ENST00000358552 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
NFIX-201ENST00000358552 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
NFIX-201ENST00000358552 HERC2O95714 4834 aa7.54□□□□□ -1.2
NFIX-201ENST00000358552 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
NFIX-201ENST00000358552 COA5Q86WW8 74 aa7.54□□□□□ -1.2
NFIX-201ENST00000358552 Q8N9P0 234 aaPredicted RBP7.52□□□□□ -1.2
NFIX-201ENST00000358552 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.2
NFIX-201ENST00000358552 PSPHP1O15172 72 aa7.5□□□□□ -1.21
NFIX-201ENST00000358552 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
NFIX-201ENST00000358552 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
NFIX-201ENST00000358552 A8MUN3 132 aa7.47□□□□□ -1.21
NFIX-201ENST00000358552 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
NFIX-201ENST00000358552 Q75L30 129 aa7.46□□□□□ -1.22
NFIX-201ENST00000358552 Q5VV11 94 aa7.45□□□□□ -1.22
NFIX-201ENST00000358552 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
NFIX-201ENST00000358552 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
NFIX-201ENST00000358552 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
NFIX-201ENST00000358552 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
NFIX-201ENST00000358552 ACYP2P14621 99 aa7.43□□□□□ -1.22
NFIX-201ENST00000358552 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
NFIX-201ENST00000358552 KRTAP13-3Q3SY46 172 aa7.41□□□□□ -1.22
NFIX-201ENST00000358552 DMBT1Q9UGM3 2413 aaPredicted RBP7.41□□□□□ -1.22
NFIX-201ENST00000358552 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
NFIX-201ENST00000358552 TNXBP22105 4242 aa7.39□□□□□ -1.23
NFIX-201ENST00000358552 HRES1P13985 223 aa7.38□□□□□ -1.23
NFIX-201ENST00000358552 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
NFIX-201ENST00000358552 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
NFIX-201ENST00000358552 ABCA13Q86UQ4 5058 aa7.36□□□□□ -1.23
NFIX-201ENST00000358552 A6NED7 52 aa7.35□□□□□ -1.23
NFIX-201ENST00000358552 Q5W150 140 aa7.35□□□□□ -1.23
NFIX-201ENST00000358552 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
NFIX-201ENST00000358552 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
NFIX-201ENST00000358552 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
NFIX-201ENST00000358552 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
NFIX-201ENST00000358552 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
NFIX-201ENST00000358552 A8MUU9 505 aa7.32□□□□□ -1.24
NFIX-201ENST00000358552 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
NFIX-201ENST00000358552 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
NFIX-201ENST00000358552 J3QL48 77 aa7.27□□□□□ -1.25
NFIX-201ENST00000358552 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
NFIX-201ENST00000358552 LCA10Q71F78 164 aa7.21□□□□□ -1.25
NFIX-201ENST00000358552 C7orf65Q6ZTY9 151 aa7.21□□□□□ -1.26
NFIX-201ENST00000358552 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
NFIX-201ENST00000358552 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
NFIX-201ENST00000358552 A0A1B0GU69 56 aa7.17□□□□□ -1.26
NFIX-201ENST00000358552 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
NFIX-201ENST00000358552 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.26
NFIX-201ENST00000358552 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.26
NFIX-201ENST00000358552 SPINK7P58062 85 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms