RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CD164Q04900 197 aa3.21□□□□□ -1.9
CD47-201ENST00000355354 KRTAP13-1Q8IUC0 172 aa3.21□□□□□ -1.9
CD47-201ENST00000355354 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 SYCNQ0VAF6 134 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 KCNQ1DNQ9H478 68 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 SPINK7P58062 85 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
CD47-201ENST00000355354 C4orf48Q5BLP8 95 aa3.19□□□□□ -1.9
CD47-201ENST00000355354 Q6ZRX8 168 aa3.19□□□□□ -1.9
CD47-201ENST00000355354 NDUFC2O95298 119 aa3.19□□□□□ -1.9
CD47-201ENST00000355354 PCOTHQ58A44 107 aa3.19□□□□□ -1.9
CD47-201ENST00000355354 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
CD47-201ENST00000355354 TRBV7-6A0A0J9YX20 115 aa3.18□□□□□ -1.9
CD47-201ENST00000355354 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
CD47-201ENST00000355354 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
CD47-201ENST00000355354 A0A1B0GW54 56 aa3.18□□□□□ -1.9
CD47-201ENST00000355354 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
CD47-201ENST00000355354 NREPQ16612 68 aa3.17□□□□□ -1.9
CD47-201ENST00000355354 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
CD47-201ENST00000355354 PRYO14603 147 aa3.16□□□□□ -1.9
CD47-201ENST00000355354 ATOX1O00244 68 aa3.16□□□□□ -1.9
CD47-201ENST00000355354 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
CD47-201ENST00000355354 PSORS1C2Q9UIG4 136 aa3.16□□□□□ -1.9
CD47-201ENST00000355354 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.9
CD47-201ENST00000355354 Q5VV11 94 aa3.15□□□□□ -1.9
CD47-201ENST00000355354 A0A087WTM6 91 aa3.15□□□□□ -1.91
CD47-201ENST00000355354 MP68P56378 58 aa3.15□□□□□ -1.91
CD47-201ENST00000355354 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
CD47-201ENST00000355354 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
CD47-201ENST00000355354 Q5VSD8 79 aa3.14□□□□□ -1.91
CD47-201ENST00000355354 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
CD47-201ENST00000355354 GVQW2A0A096LPI5 108 aaPredicted RBP3.14□□□□□ -1.91
CD47-201ENST00000355354 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
CD47-201ENST00000355354 LOC110117498A0A087WWA1 95 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 TRAV22A0A0B4J277 110 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 ATP5EP56381 51 aaPredicted RBP3.13□□□□□ -1.91
CD47-201ENST00000355354 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 CIRBP-AS1Q8TBR5 109 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 C1orf134Q5TEV5 83 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 Q8NBF4 154 aa3.13□□□□□ -1.91
CD47-201ENST00000355354 J3KT08 172 aa3.12□□□□□ -1.91
CD47-201ENST00000355354 MRPL55Q7Z7F7 128 aaKnown RBP3.12□□□□□ -1.91
CD47-201ENST00000355354 hDV103S1A0JD37 113 aa3.12□□□□□ -1.91
CD47-201ENST00000355354 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
CD47-201ENST00000355354 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
CD47-201ENST00000355354 NDUFC1O43677 76 aa3.11□□□□□ -1.91
CD47-201ENST00000355354 TMEM258P61165 79 aa3.11□□□□□ -1.91
CD47-201ENST00000355354 C9orf163Q8N9P6 203 aa3.1□□□□□ -1.91
CD47-201ENST00000355354 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
CD47-201ENST00000355354 LIMD2Q9BT23 127 aa3.1□□□□□ -1.91
CD47-201ENST00000355354 IGLV5-52A0A0A0MRZ9 124 aa3.09□□□□□ -1.91
CD47-201ENST00000355354 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
CD47-201ENST00000355354 TYMSOSQ8TAI1 123 aa3.09□□□□□ -1.92
CD47-201ENST00000355354 SPAG11AQ6PDA7 123 aa3.09□□□□□ -1.92
CD47-201ENST00000355354 BCE1O60756 84 aa3.08□□□□□ -1.92
CD47-201ENST00000355354 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
CD47-201ENST00000355354 IGLV5-37A0A075B6J1 123 aa3.08□□□□□ -1.92
CD47-201ENST00000355354 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
CD47-201ENST00000355354 ASB16-AS1Q495Z4 193 aa3.07□□□□□ -1.92
CD47-201ENST00000355354 HRES1P13985 223 aa3.07□□□□□ -1.92
CD47-201ENST00000355354 LCE2DQ5TA82 110 aaPredicted RBP3.07□□□□□ -1.92
CD47-201ENST00000355354 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
CD47-201ENST00000355354 PLA2G2DQ9UNK4 145 aa3.07□□□□□ -1.92
CD47-201ENST00000355354 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
CD47-201ENST00000355354 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
CD47-201ENST00000355354 NDUFS5O43920 106 aa3.06□□□□□ -1.92
CD47-201ENST00000355354 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
CD47-201ENST00000355354 V9GYY9 64 aa3.05□□□□□ -1.92
CD47-201ENST00000355354 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
CD47-201ENST00000355354 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
CD47-201ENST00000355354 CXCL6P80162 114 aa3.04□□□□□ -1.92
CD47-201ENST00000355354 CHKB-CPT1BH3BT56 60 aa3.04□□□□□ -1.92
CD47-201ENST00000355354 H0Y9J4 135 aa3.03□□□□□ -1.92
CD47-201ENST00000355354 SEC61GP60059 68 aa3.03□□□□□ -1.92
CD47-201ENST00000355354 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
CD47-201ENST00000355354 PRR15LQ9BU68 103 aa3.02□□□□□ -1.93
CD47-201ENST00000355354 H3BPC8 53 aa3.02□□□□□ -1.93
CD47-201ENST00000355354 PLA2G1BP04054 148 aaKnown RBP3.02□□□□□ -1.93
CD47-201ENST00000355354 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
CD47-201ENST00000355354 TP53AIP1Q9HCN2 124 aa3.01□□□□□ -1.93
CD47-201ENST00000355354 KRTAP3-3Q9BYR6 98 aa3.01□□□□□ -1.93
CD47-201ENST00000355354 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
CD47-201ENST00000355354 CYP4F30PQ9H0H9 118 aa3.01□□□□□ -1.93
CD47-201ENST00000355354 PLAC8Q9NZF1 115 aa3.01□□□□□ -1.93
CD47-201ENST00000355354 FAM229AH3BQW9 127 aa3□□□□□ -1.93
CD47-201ENST00000355354 C8orf87E5RJ46 101 aa2.99□□□□□ -1.93
CD47-201ENST00000355354 C1orf195Q5TG92 126 aa2.99□□□□□ -1.93
CD47-201ENST00000355354 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
CD47-201ENST00000355354 C5orf47Q569G3 176 aa2.98□□□□□ -1.93
CD47-201ENST00000355354 CASC2Q6XLA1 102 aa2.98□□□□□ -1.93
CD47-201ENST00000355354 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
CD47-201ENST00000355354 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
CD47-201ENST00000355354 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
CD47-201ENST00000355354 C9orf92A6NGG3 77 aa2.96□□□□□ -1.94
CD47-201ENST00000355354 HCG22E2RYF7 251 aa2.96□□□□□ -1.94
CD47-201ENST00000355354 H0YAA0 97 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms