RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
IFT88-202ENST00000351808 STAB1Q9NY15 2570 aa7.75□□□□□ -1.17
IFT88-202ENST00000351808 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
IFT88-202ENST00000351808 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
IFT88-202ENST00000351808 INAFM1C9JVW0 142 aa7.72□□□□□ -1.17
IFT88-202ENST00000351808 ANAPC11Q9NYG5 84 aa7.72□□□□□ -1.17
IFT88-202ENST00000351808 MAST4O15021 2626 aa7.72□□□□□ -1.17
IFT88-202ENST00000351808 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.17
IFT88-202ENST00000351808 IGLV7-43P04211 117 aa7.71□□□□□ -1.17
IFT88-202ENST00000351808 NOTCH1P46531 2555 aa7.69□□□□□ -1.18
IFT88-202ENST00000351808 KRTAP10-11P60412 298 aa7.69□□□□□ -1.18
IFT88-202ENST00000351808 ANK2Q01484 3957 aa7.69□□□□□ -1.18
IFT88-202ENST00000351808 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
IFT88-202ENST00000351808 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
IFT88-202ENST00000351808 PANO1I0J062 215 aa7.68□□□□□ -1.18
IFT88-202ENST00000351808 IGLV5-52A0A0A0MRZ9 124 aa7.66□□□□□ -1.18
IFT88-202ENST00000351808 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
IFT88-202ENST00000351808 LINC00483Q53H64 154 aa7.66□□□□□ -1.18
IFT88-202ENST00000351808 A8MUU9 505 aa7.65□□□□□ -1.18
IFT88-202ENST00000351808 LINC00304Q8N9R0 145 aa7.65□□□□□ -1.19
IFT88-202ENST00000351808 LYSTQ99698 3801 aa7.65□□□□□ -1.19
IFT88-202ENST00000351808 P0C880 135 aa7.64□□□□□ -1.19
IFT88-202ENST00000351808 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
IFT88-202ENST00000351808 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
IFT88-202ENST00000351808 SPINK1P00995 79 aa7.63□□□□□ -1.19
IFT88-202ENST00000351808 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
IFT88-202ENST00000351808 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
IFT88-202ENST00000351808 H0YAA0 97 aa7.58□□□□□ -1.2
IFT88-202ENST00000351808 Q6ZSA8 131 aa7.57□□□□□ -1.2
IFT88-202ENST00000351808 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
IFT88-202ENST00000351808 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
IFT88-202ENST00000351808 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
IFT88-202ENST00000351808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
IFT88-202ENST00000351808 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
IFT88-202ENST00000351808 LY6G6CO95867 125 aa7.53□□□□□ -1.2
IFT88-202ENST00000351808 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
IFT88-202ENST00000351808 PSORS1C2Q9UIG4 136 aa7.5□□□□□ -1.21
IFT88-202ENST00000351808 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
IFT88-202ENST00000351808 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
IFT88-202ENST00000351808 Q8N1X5 172 aa7.48□□□□□ -1.21
IFT88-202ENST00000351808 DNAH8Q96JB1 4490 aa7.47□□□□□ -1.21
IFT88-202ENST00000351808 SSBP3-AS1Q7Z2R9 100 aa7.47□□□□□ -1.21
IFT88-202ENST00000351808 SPACA4Q8TDM5 124 aa7.46□□□□□ -1.22
IFT88-202ENST00000351808 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
IFT88-202ENST00000351808 TGP01266 2768 aa7.45□□□□□ -1.22
IFT88-202ENST00000351808 TYMSOSQ8TAI1 123 aa7.45□□□□□ -1.22
IFT88-202ENST00000351808 A0A0A0MQY5 61 aa7.44□□□□□ -1.22
IFT88-202ENST00000351808 A0A1B0GU33 70 aa7.43□□□□□ -1.22
IFT88-202ENST00000351808 STAB2Q8WWQ8 2551 aa7.39□□□□□ -1.23
IFT88-202ENST00000351808 KRTAP24-1Q3LI83 254 aa7.38□□□□□ -1.23
IFT88-202ENST00000351808 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
IFT88-202ENST00000351808 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
IFT88-202ENST00000351808 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
IFT88-202ENST00000351808 CMYA5Q8N3K9 4069 aa7.36□□□□□ -1.23
IFT88-202ENST00000351808 NDUFAF8A1L188 74 aa7.35□□□□□ -1.23
IFT88-202ENST00000351808 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
IFT88-202ENST00000351808 K7ERS5 55 aa7.32□□□□□ -1.24
IFT88-202ENST00000351808 A0A087WTM6 91 aa7.32□□□□□ -1.24
IFT88-202ENST00000351808 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
IFT88-202ENST00000351808 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
IFT88-202ENST00000351808 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
IFT88-202ENST00000351808 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
IFT88-202ENST00000351808 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
IFT88-202ENST00000351808 NUPR2A6NF83 97 aa7.27□□□□□ -1.25
IFT88-202ENST00000351808 DNAH3Q8TD57 4116 aa7.26□□□□□ -1.25
IFT88-202ENST00000351808 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
IFT88-202ENST00000351808 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
IFT88-202ENST00000351808 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
IFT88-202ENST00000351808 KRTAP13-2Q52LG2 175 aa7.21□□□□□ -1.26
IFT88-202ENST00000351808 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
IFT88-202ENST00000351808 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
IFT88-202ENST00000351808 HECTD4Q9Y4D8 3996 aa7.19□□□□□ -1.26
IFT88-202ENST00000351808 FBN3Q75N90 2809 aa7.17□□□□□ -1.26
IFT88-202ENST00000351808 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
IFT88-202ENST00000351808 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
IFT88-202ENST00000351808 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
IFT88-202ENST00000351808 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
IFT88-202ENST00000351808 A0A0D9SG42 100 aa7.08□□□□□ -1.28
IFT88-202ENST00000351808 KMT2AQ03164 3969 aa7.08□□□□□ -1.28
IFT88-202ENST00000351808 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.28
IFT88-202ENST00000351808 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
IFT88-202ENST00000351808 DNAH2Q9P225 4427 aa7.01□□□□□ -1.29
IFT88-202ENST00000351808 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
IFT88-202ENST00000351808 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
IFT88-202ENST00000351808 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.3
IFT88-202ENST00000351808 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
IFT88-202ENST00000351808 DNHD1Q96M86 4753 aa6.95□□□□□ -1.3
IFT88-202ENST00000351808 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
IFT88-202ENST00000351808 DNAH6Q9C0G6 4158 aa6.94□□□□□ -1.3
IFT88-202ENST00000351808 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
IFT88-202ENST00000351808 STARD9Q9P2P6 4700 aa6.9□□□□□ -1.31
IFT88-202ENST00000351808 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
IFT88-202ENST00000351808 S4R3F8 94 aa6.87□□□□□ -1.31
IFT88-202ENST00000351808 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
IFT88-202ENST00000351808 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
IFT88-202ENST00000351808 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
IFT88-202ENST00000351808 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
IFT88-202ENST00000351808 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
IFT88-202ENST00000351808 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
IFT88-202ENST00000351808 XP32Q5T750 250 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms