RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 LY6G6CO95867 125 aa4.1□□□□□ -1.75
MSR1-202ENST00000350896 A8MUU9 505 aa4.09□□□□□ -1.75
MSR1-202ENST00000350896 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
MSR1-202ENST00000350896 KRTAP24-1Q3LI83 254 aa4.09□□□□□ -1.75
MSR1-202ENST00000350896 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
MSR1-202ENST00000350896 PRLHP81277 87 aa4.09□□□□□ -1.76
MSR1-202ENST00000350896 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
MSR1-202ENST00000350896 CMYA5Q8N3K9 4069 aa4.08□□□□□ -1.76
MSR1-202ENST00000350896 MEGF8Q7Z7M0 2845 aa4.07□□□□□ -1.76
MSR1-202ENST00000350896 DEFB4AO15263 64 aa4.07□□□□□ -1.76
MSR1-202ENST00000350896 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
MSR1-202ENST00000350896 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
MSR1-202ENST00000350896 IGLV5-52A0A0A0MRZ9 124 aa4.05□□□□□ -1.76
MSR1-202ENST00000350896 Q5W150 140 aa4.04□□□□□ -1.76
MSR1-202ENST00000350896 A0A096LNI7 61 aa4.04□□□□□ -1.76
MSR1-202ENST00000350896 OXLD1Q5BKU9 147 aa4.04□□□□□ -1.76
MSR1-202ENST00000350896 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
MSR1-202ENST00000350896 CHTF8P0CG12 524 aa4.03□□□□□ -1.76
MSR1-202ENST00000350896 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
MSR1-202ENST00000350896 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
MSR1-202ENST00000350896 WWC2-AS2Q96NR7 200 aa4.01□□□□□ -1.77
MSR1-202ENST00000350896 K7ERS5 55 aa4.01□□□□□ -1.77
MSR1-202ENST00000350896 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
MSR1-202ENST00000350896 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
MSR1-202ENST00000350896 NUPR2A6NF83 97 aa3.98□□□□□ -1.77
MSR1-202ENST00000350896 PANO1I0J062 215 aa3.98□□□□□ -1.77
MSR1-202ENST00000350896 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
MSR1-202ENST00000350896 LYSTQ99698 3801 aa3.97□□□□□ -1.77
MSR1-202ENST00000350896 CASC10Q5T4H9 136 aa3.96□□□□□ -1.78
MSR1-202ENST00000350896 COX6B2Q6YFQ2 88 aa3.96□□□□□ -1.78
MSR1-202ENST00000350896 K7EIL1 84 aa3.95□□□□□ -1.78
MSR1-202ENST00000350896 P0C880 135 aa3.94□□□□□ -1.78
MSR1-202ENST00000350896 KRTAP11-1Q8IUC1 163 aa3.94□□□□□ -1.78
MSR1-202ENST00000350896 H0YAA0 97 aa3.94□□□□□ -1.78
MSR1-202ENST00000350896 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
MSR1-202ENST00000350896 Q6ZSA8 131 aa3.93□□□□□ -1.78
MSR1-202ENST00000350896 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
MSR1-202ENST00000350896 A0A1B0GU33 70 aa3.92□□□□□ -1.78
MSR1-202ENST00000350896 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
MSR1-202ENST00000350896 H1FX-AS1Q4G0G2 97 aa3.91□□□□□ -1.78
MSR1-202ENST00000350896 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
MSR1-202ENST00000350896 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
MSR1-202ENST00000350896 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
MSR1-202ENST00000350896 DNAH9Q9NYC9 4486 aa3.88□□□□□ -1.79
MSR1-202ENST00000350896 A0A087WTM6 91 aa3.87□□□□□ -1.79
MSR1-202ENST00000350896 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
MSR1-202ENST00000350896 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
MSR1-202ENST00000350896 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
MSR1-202ENST00000350896 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
MSR1-202ENST00000350896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.86□□□□□ -1.79
MSR1-202ENST00000350896 PSORS1C2Q9UIG4 136 aa3.85□□□□□ -1.79
MSR1-202ENST00000350896 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
MSR1-202ENST00000350896 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
MSR1-202ENST00000350896 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
MSR1-202ENST00000350896 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
MSR1-202ENST00000350896 SPINK6Q6UWN8 80 aa3.81□□□□□ -1.8
MSR1-202ENST00000350896 RPL37P61927 97 aaKnown RBP3.8□□□□□ -1.8
MSR1-202ENST00000350896 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
MSR1-202ENST00000350896 KRTAP1-5Q9BYS1 174 aa3.79□□□□□ -1.8
MSR1-202ENST00000350896 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
MSR1-202ENST00000350896 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
MSR1-202ENST00000350896 KMT2CQ8NEZ4 4911 aaKnown RBP3.78□□□□□ -1.8
MSR1-202ENST00000350896 HYDINQ4G0P3 5121 aa3.77□□□□□ -1.81
MSR1-202ENST00000350896 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
MSR1-202ENST00000350896 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
MSR1-202ENST00000350896 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
MSR1-202ENST00000350896 APLNQ9ULZ1 77 aa3.76□□□□□ -1.81
MSR1-202ENST00000350896 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
MSR1-202ENST00000350896 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
MSR1-202ENST00000350896 NBDYA0A0U1RRE5 68 aa3.75□□□□□ -1.81
MSR1-202ENST00000350896 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
MSR1-202ENST00000350896 UBE2DNLQ8IWF7 75 aa3.74□□□□□ -1.81
MSR1-202ENST00000350896 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
MSR1-202ENST00000350896 TPRXLQ17RH7 258 aa3.73□□□□□ -1.81
MSR1-202ENST00000350896 SPINK1P00995 79 aa3.72□□□□□ -1.81
MSR1-202ENST00000350896 DYNC2H1Q8NCM8 4307 aaKnown RBP3.71□□□□□ -1.82
MSR1-202ENST00000350896 SEC61BP60468 96 aaKnown RBP3.69□□□□□ -1.82
MSR1-202ENST00000350896 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
MSR1-202ENST00000350896 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
MSR1-202ENST00000350896 Q8N1X5 172 aa3.69□□□□□ -1.82
MSR1-202ENST00000350896 RYR3Q15413 4870 aa3.68□□□□□ -1.82
MSR1-202ENST00000350896 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
MSR1-202ENST00000350896 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
MSR1-202ENST00000350896 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
MSR1-202ENST00000350896 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
MSR1-202ENST00000350896 XP32Q5T750 250 aa3.65□□□□□ -1.83
MSR1-202ENST00000350896 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
MSR1-202ENST00000350896 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
MSR1-202ENST00000350896 DNAH17Q9UFH2 4485 aa3.63□□□□□ -1.83
MSR1-202ENST00000350896 DNAH6Q9C0G6 4158 aa3.63□□□□□ -1.83
MSR1-202ENST00000350896 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
MSR1-202ENST00000350896 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
MSR1-202ENST00000350896 KRTAP21-3Q3LHN1 58 aa3.6□□□□□ -1.83
MSR1-202ENST00000350896 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.83
MSR1-202ENST00000350896 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
MSR1-202ENST00000350896 S4R3F8 94 aa3.59□□□□□ -1.83
MSR1-202ENST00000350896 FLG2Q5D862 2391 aaPredicted RBP3.59□□□□□ -1.83
MSR1-202ENST00000350896 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
MSR1-202ENST00000350896 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.84
MSR1-202ENST00000350896 RYR2Q92736 4967 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms