RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
UBA3-201ENST00000349511 TRAV22A0A0B4J277 110 aa8□□□□□ -1.13
UBA3-201ENST00000349511 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
UBA3-201ENST00000349511 H0Y9P7 68 aa7.99□□□□□ -1.13
UBA3-201ENST00000349511 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
UBA3-201ENST00000349511 BRK1Q8WUW1 75 aa7.98□□□□□ -1.13
UBA3-201ENST00000349511 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
UBA3-201ENST00000349511 H3BPC8 53 aa7.95□□□□□ -1.14
UBA3-201ENST00000349511 MOBPQ13875 183 aa7.95□□□□□ -1.14
UBA3-201ENST00000349511 Q1T7F1 81 aa7.95□□□□□ -1.14
UBA3-201ENST00000349511 MMP24-AS1A0A0U1RRL7 71 aa7.94□□□□□ -1.14
UBA3-201ENST00000349511 HSPG2P98160 4391 aa7.94□□□□□ -1.14
UBA3-201ENST00000349511 A0A087X002 238 aa7.91□□□□□ -1.14
UBA3-201ENST00000349511 Q96NJ1 140 aa7.91□□□□□ -1.14
UBA3-201ENST00000349511 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
UBA3-201ENST00000349511 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
UBA3-201ENST00000349511 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
UBA3-201ENST00000349511 RYR1P21817 5038 aa7.87□□□□□ -1.15
UBA3-201ENST00000349511 PSPHP1O15172 72 aa7.87□□□□□ -1.15
UBA3-201ENST00000349511 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
UBA3-201ENST00000349511 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
UBA3-201ENST00000349511 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
UBA3-201ENST00000349511 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
UBA3-201ENST00000349511 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
UBA3-201ENST00000349511 C8orf17Q9NRJ1 99 aa7.84□□□□□ -1.15
UBA3-201ENST00000349511 TP53AIP1Q9HCN2 124 aa7.82□□□□□ -1.16
UBA3-201ENST00000349511 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
UBA3-201ENST00000349511 V9GYY9 64 aa7.82□□□□□ -1.16
UBA3-201ENST00000349511 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
UBA3-201ENST00000349511 A0A1B0GVX0 72 aa7.81□□□□□ -1.16
UBA3-201ENST00000349511 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
UBA3-201ENST00000349511 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
UBA3-201ENST00000349511 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
UBA3-201ENST00000349511 A8MUN3 132 aa7.8□□□□□ -1.16
UBA3-201ENST00000349511 Q5VSD8 79 aa7.79□□□□□ -1.16
UBA3-201ENST00000349511 PRR26Q8N8Z3 221 aa7.79□□□□□ -1.16
UBA3-201ENST00000349511 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
UBA3-201ENST00000349511 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
UBA3-201ENST00000349511 SSBP3-AS1Q7Z2R9 100 aa7.78□□□□□ -1.16
UBA3-201ENST00000349511 NDUFS5O43920 106 aa7.78□□□□□ -1.16
UBA3-201ENST00000349511 Q8N9P0 234 aaPredicted RBP7.78□□□□□ -1.16
UBA3-201ENST00000349511 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
UBA3-201ENST00000349511 CD164Q04900 197 aa7.76□□□□□ -1.17
UBA3-201ENST00000349511 COA5Q86WW8 74 aa7.76□□□□□ -1.17
UBA3-201ENST00000349511 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
UBA3-201ENST00000349511 Q5VV11 94 aa7.76□□□□□ -1.17
UBA3-201ENST00000349511 PKHD1L1Q86WI1 4243 aa7.76□□□□□ -1.17
UBA3-201ENST00000349511 C1orf195Q5TG92 126 aa7.75□□□□□ -1.17
UBA3-201ENST00000349511 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
UBA3-201ENST00000349511 LIMD2Q9BT23 127 aa7.74□□□□□ -1.17
UBA3-201ENST00000349511 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
UBA3-201ENST00000349511 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
UBA3-201ENST00000349511 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
UBA3-201ENST00000349511 CHKB-CPT1BH3BT56 60 aa7.68□□□□□ -1.18
UBA3-201ENST00000349511 C4orf48Q5BLP8 95 aa7.68□□□□□ -1.18
UBA3-201ENST00000349511 A8MU10 97 aa7.66□□□□□ -1.18
UBA3-201ENST00000349511 Q8N1X5 172 aa7.66□□□□□ -1.18
UBA3-201ENST00000349511 TNXBP22105 4242 aa7.66□□□□□ -1.18
UBA3-201ENST00000349511 LINC00304Q8N9R0 145 aa7.66□□□□□ -1.18
UBA3-201ENST00000349511 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
UBA3-201ENST00000349511 LOC101927531A0A1B0GV80 90 aa7.64□□□□□ -1.19
UBA3-201ENST00000349511 Q5W150 140 aa7.64□□□□□ -1.19
UBA3-201ENST00000349511 HRES1P13985 223 aa7.63□□□□□ -1.19
UBA3-201ENST00000349511 Q75L30 129 aa7.63□□□□□ -1.19
UBA3-201ENST00000349511 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
UBA3-201ENST00000349511 SPINK1P00995 79 aa7.61□□□□□ -1.19
UBA3-201ENST00000349511 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
UBA3-201ENST00000349511 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
UBA3-201ENST00000349511 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
UBA3-201ENST00000349511 LINC01558Q9Y6Z2 57 aa7.6□□□□□ -1.19
UBA3-201ENST00000349511 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
UBA3-201ENST00000349511 A6NED7 52 aa7.57□□□□□ -1.2
UBA3-201ENST00000349511 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
UBA3-201ENST00000349511 LCA10Q71F78 164 aa7.57□□□□□ -1.2
UBA3-201ENST00000349511 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
UBA3-201ENST00000349511 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
UBA3-201ENST00000349511 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
UBA3-201ENST00000349511 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
UBA3-201ENST00000349511 LINC00313P59037 77 aa7.54□□□□□ -1.2
UBA3-201ENST00000349511 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.21
UBA3-201ENST00000349511 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
UBA3-201ENST00000349511 ACYP2P14621 99 aa7.49□□□□□ -1.21
UBA3-201ENST00000349511 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
UBA3-201ENST00000349511 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
UBA3-201ENST00000349511 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
UBA3-201ENST00000349511 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
UBA3-201ENST00000349511 SPINK7P58062 85 aa7.47□□□□□ -1.21
UBA3-201ENST00000349511 HERC2O95714 4834 aa7.46□□□□□ -1.22
UBA3-201ENST00000349511 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
UBA3-201ENST00000349511 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
UBA3-201ENST00000349511 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
UBA3-201ENST00000349511 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
UBA3-201ENST00000349511 A6NN06 94 aa7.4□□□□□ -1.23
UBA3-201ENST00000349511 SEC61GP60059 68 aa7.39□□□□□ -1.23
UBA3-201ENST00000349511 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
UBA3-201ENST00000349511 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
UBA3-201ENST00000349511 A0A1B0GU69 56 aa7.31□□□□□ -1.24
UBA3-201ENST00000349511 J3QL48 77 aa7.29□□□□□ -1.24
UBA3-201ENST00000349511 LPAP08519 4548 aa7.28□□□□□ -1.24
UBA3-201ENST00000349511 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms