RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 A0A096LNJ9 63 aa2.58□□□□□ -2
NCOA1-202ENST00000348332 ZCCHC13Q8WW36 166 aaKnown RBP2.57□□□□□ -2
NCOA1-202ENST00000348332 PLAC8Q9NZF1 115 aa2.57□□□□□ -2
NCOA1-202ENST00000348332 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
NCOA1-202ENST00000348332 KRTAP10-1P60331 282 aa2.57□□□□□ -2
NCOA1-202ENST00000348332 ANK3Q12955 4377 aaKnown RBP2.57□□□□□ -2
NCOA1-202ENST00000348332 VWFP04275 2813 aa2.57□□□□□ -2
NCOA1-202ENST00000348332 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
NCOA1-202ENST00000348332 KRTAP10-2P60368 255 aa2.56□□□□□ -2
NCOA1-202ENST00000348332 Q6ZRN7 208 aaPredicted RBP2.56□□□□□ -2
NCOA1-202ENST00000348332 C20orf166-AS1Q96NR2 134 aa2.56□□□□□ -2
NCOA1-202ENST00000348332 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
NCOA1-202ENST00000348332 PRO0628Q9UI54 55 aa2.55□□□□□ -2
NCOA1-202ENST00000348332 FBN3Q75N90 2809 aa2.55□□□□□ -2
NCOA1-202ENST00000348332 A0A0A0MQY5 61 aa2.55□□□□□ -2
NCOA1-202ENST00000348332 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
NCOA1-202ENST00000348332 VPS13CQ709C8 3753 aa2.54□□□□□ -2
NCOA1-202ENST00000348332 KRTAP1-5Q9BYS1 174 aa2.54□□□□□ -2
NCOA1-202ENST00000348332 RYR3Q15413 4870 aa2.54□□□□□ -2
NCOA1-202ENST00000348332 TENM1Q9UKZ4 2725 aa2.53□□□□□ -2
NCOA1-202ENST00000348332 DMAC1Q96GE9 116 aa2.53□□□□□ -2
NCOA1-202ENST00000348332 KRTAP26-1Q6PEX3 210 aa2.53□□□□□ -2
NCOA1-202ENST00000348332 SMCPP49901 116 aaPredicted RBP2.52□□□□□ -2.01
NCOA1-202ENST00000348332 CYP4F30PQ9H0H9 118 aa2.52□□□□□ -2.01
NCOA1-202ENST00000348332 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
NCOA1-202ENST00000348332 TENM3Q9P273 2699 aa2.52□□□□□ -2.01
NCOA1-202ENST00000348332 A0A1B0GVY2 172 aa2.51□□□□□ -2.01
NCOA1-202ENST00000348332 P0C880 135 aa2.5□□□□□ -2.01
NCOA1-202ENST00000348332 ZNF469Q96JG9 3925 aaPredicted RBP2.49□□□□□ -2.01
NCOA1-202ENST00000348332 AKAP9Q99996 3911 aa2.49□□□□□ -2.01
NCOA1-202ENST00000348332 FBN1P35555 2871 aaKnown RBP2.49□□□□□ -2.01
NCOA1-202ENST00000348332 Q8N9P0 234 aaPredicted RBP2.49□□□□□ -2.01
NCOA1-202ENST00000348332 SPRR1BP22528 89 aa2.48□□□□□ -2.01
NCOA1-202ENST00000348332 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
NCOA1-202ENST00000348332 Q5W150 140 aa2.48□□□□□ -2.01
NCOA1-202ENST00000348332 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
NCOA1-202ENST00000348332 LCE2DQ5TA82 110 aaPredicted RBP2.46□□□□□ -2.01
NCOA1-202ENST00000348332 A8MUU9 505 aa2.46□□□□□ -2.02
NCOA1-202ENST00000348332 CELSR1Q9NYQ6 3014 aa2.46□□□□□ -2.02
NCOA1-202ENST00000348332 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
NCOA1-202ENST00000348332 Q8NDZ9 215 aa2.45□□□□□ -2.02
NCOA1-202ENST00000348332 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
NCOA1-202ENST00000348332 ROMO1P60602 79 aa2.45□□□□□ -2.02
NCOA1-202ENST00000348332 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
NCOA1-202ENST00000348332 KRTAP29-1A8MX34 341 aaPredicted RBP2.44□□□□□ -2.02
NCOA1-202ENST00000348332 SPRR1AP35321 89 aa2.44□□□□□ -2.02
NCOA1-202ENST00000348332 PKD1L1Q8TDX9 2849 aa2.43□□□□□ -2.02
NCOA1-202ENST00000348332 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
NCOA1-202ENST00000348332 RYR2Q92736 4967 aa2.43□□□□□ -2.02
NCOA1-202ENST00000348332 EIF4EBP3O60516 100 aaPredicted RBP2.42□□□□□ -2.02
NCOA1-202ENST00000348332 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
NCOA1-202ENST00000348332 TNP1P09430 55 aa2.41□□□□□ -2.02
NCOA1-202ENST00000348332 SPANXA2-OT1Q8N9U9 137 aa2.41□□□□□ -2.02
NCOA1-202ENST00000348332 A0A087X002 238 aa2.4□□□□□ -2.02
NCOA1-202ENST00000348332 PANO1I0J062 215 aa2.4□□□□□ -2.02
NCOA1-202ENST00000348332 ANK2Q01484 3957 aa2.4□□□□□ -2.03
NCOA1-202ENST00000348332 NBEAL2Q6ZNJ1 2754 aa2.39□□□□□ -2.03
NCOA1-202ENST00000348332 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
NCOA1-202ENST00000348332 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
NCOA1-202ENST00000348332 C10orf95Q9H7T3 257 aa2.39□□□□□ -2.03
NCOA1-202ENST00000348332 MMP24-AS1A0A0U1RRL7 71 aa2.38□□□□□ -2.03
NCOA1-202ENST00000348332 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
NCOA1-202ENST00000348332 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
NCOA1-202ENST00000348332 CSMD3Q7Z407 3707 aa2.36□□□□□ -2.03
NCOA1-202ENST00000348332 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
NCOA1-202ENST00000348332 Q5XG85 94 aa2.36□□□□□ -2.03
NCOA1-202ENST00000348332 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
NCOA1-202ENST00000348332 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
NCOA1-202ENST00000348332 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
NCOA1-202ENST00000348332 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
NCOA1-202ENST00000348332 MEGF8Q7Z7M0 2845 aa2.33□□□□□ -2.04
NCOA1-202ENST00000348332 Q75L30 129 aa2.33□□□□□ -2.04
NCOA1-202ENST00000348332 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
NCOA1-202ENST00000348332 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
NCOA1-202ENST00000348332 TGP01266 2768 aa2.32□□□□□ -2.04
NCOA1-202ENST00000348332 HUWE1Q7Z6Z7 4374 aaKnown RBP2.32□□□□□ -2.04
NCOA1-202ENST00000348332 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
NCOA1-202ENST00000348332 OCR1Q9BZK8 76 aa2.31□□□□□ -2.04
NCOA1-202ENST00000348332 LINC01558Q9Y6Z2 57 aa2.31□□□□□ -2.04
NCOA1-202ENST00000348332 LINC00472Q9H8W2 130 aa2.31□□□□□ -2.04
NCOA1-202ENST00000348332 TPRXLQ17RH7 258 aa2.31□□□□□ -2.04
NCOA1-202ENST00000348332 KRTAP7-1Q8IUC3 87 aa2.3□□□□□ -2.04
NCOA1-202ENST00000348332 KRTAP17-1Q9BYP8 105 aa2.3□□□□□ -2.04
NCOA1-202ENST00000348332 A8MU10 97 aa2.3□□□□□ -2.04
NCOA1-202ENST00000348332 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
NCOA1-202ENST00000348332 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
NCOA1-202ENST00000348332 KRTAP3-3Q9BYR6 98 aa2.29□□□□□ -2.04
NCOA1-202ENST00000348332 KRTAP3-2Q9BYR7 98 aa2.29□□□□□ -2.04
NCOA1-202ENST00000348332 DNAH6Q9C0G6 4158 aa2.28□□□□□ -2.04
NCOA1-202ENST00000348332 LYSTQ99698 3801 aa2.28□□□□□ -2.04
NCOA1-202ENST00000348332 DNAH1Q9P2D7 4330 aa2.28□□□□□ -2.05
NCOA1-202ENST00000348332 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.05
NCOA1-202ENST00000348332 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.05
NCOA1-202ENST00000348332 KRTAP11-1Q8IUC1 163 aa2.27□□□□□ -2.05
NCOA1-202ENST00000348332 RYR1P21817 5038 aa2.27□□□□□ -2.05
NCOA1-202ENST00000348332 UBR4Q5T4S7 5183 aa2.27□□□□□ -2.05
NCOA1-202ENST00000348332 Q5VV11 94 aa2.26□□□□□ -2.05
NCOA1-202ENST00000348332 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
NCOA1-202ENST00000348332 KRTAP10-4P60372 401 aaPredicted RBP2.24□□□□□ -2.05
NCOA1-202ENST00000348332 CYSTM1Q9H1C7 97 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms