RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
NUP50-201ENST00000347635 FBN2P35556 2912 aa8.62□□□□□ -1.03
NUP50-201ENST00000347635 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
NUP50-201ENST00000347635 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
NUP50-201ENST00000347635 A0A1B0GU33 70 aa8.59□□□□□ -1.03
NUP50-201ENST00000347635 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
NUP50-201ENST00000347635 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
NUP50-201ENST00000347635 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
NUP50-201ENST00000347635 Q6ZSA8 131 aa8.57□□□□□ -1.04
NUP50-201ENST00000347635 A8MU10 97 aa8.57□□□□□ -1.04
NUP50-201ENST00000347635 A6NN06 94 aa8.56□□□□□ -1.04
NUP50-201ENST00000347635 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
NUP50-201ENST00000347635 NIPBLQ6KC79 2804 aaeCLIP8.54□□□□□ -1.04
NUP50-201ENST00000347635 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
NUP50-201ENST00000347635 CELSR2Q9HCU4 2923 aa8.53□□□□□ -1.04
NUP50-201ENST00000347635 NF1P21359 2839 aa8.51□□□□□ -1.05
NUP50-201ENST00000347635 TENM4Q6N022 2769 aa8.51□□□□□ -1.05
NUP50-201ENST00000347635 BSNQ9UPA5 3926 aa8.5□□□□□ -1.05
NUP50-201ENST00000347635 CSAG1Q6PB30 78 aa8.49□□□□□ -1.05
NUP50-201ENST00000347635 A0A0D9SG42 100 aa8.49□□□□□ -1.05
NUP50-201ENST00000347635 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
NUP50-201ENST00000347635 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
NUP50-201ENST00000347635 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
NUP50-201ENST00000347635 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
NUP50-201ENST00000347635 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
NUP50-201ENST00000347635 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
NUP50-201ENST00000347635 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
NUP50-201ENST00000347635 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
NUP50-201ENST00000347635 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
NUP50-201ENST00000347635 S4R3F8 94 aa8.29□□□□□ -1.08
NUP50-201ENST00000347635 PDZD2O15018 2839 aa8.28□□□□□ -1.08
NUP50-201ENST00000347635 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
NUP50-201ENST00000347635 H3BS24 57 aa8.23□□□□□ -1.09
NUP50-201ENST00000347635 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
NUP50-201ENST00000347635 ROMO1P60602 79 aa8.21□□□□□ -1.1
NUP50-201ENST00000347635 M0R2T5 61 aa8.17□□□□□ -1.1
NUP50-201ENST00000347635 TENM3Q9P273 2699 aa8.14□□□□□ -1.11
NUP50-201ENST00000347635 ANK3Q12955 4377 aaKnown RBP8.13□□□□□ -1.11
NUP50-201ENST00000347635 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
NUP50-201ENST00000347635 CSMD2Q7Z408 3487 aa8.09□□□□□ -1.11
NUP50-201ENST00000347635 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
NUP50-201ENST00000347635 TENM1Q9UKZ4 2725 aa8.07□□□□□ -1.12
NUP50-201ENST00000347635 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
NUP50-201ENST00000347635 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
NUP50-201ENST00000347635 NBPF19A0A087WUL8 3843 aa8.05□□□□□ -1.12
NUP50-201ENST00000347635 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
NUP50-201ENST00000347635 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
NUP50-201ENST00000347635 A8MUU9 505 aa8.03□□□□□ -1.12
NUP50-201ENST00000347635 VWFP04275 2813 aa8.03□□□□□ -1.12
NUP50-201ENST00000347635 CUBNO60494 3623 aa8.02□□□□□ -1.12
NUP50-201ENST00000347635 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
NUP50-201ENST00000347635 VPS13CQ709C8 3753 aa8□□□□□ -1.13
NUP50-201ENST00000347635 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
NUP50-201ENST00000347635 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
NUP50-201ENST00000347635 R4GN34 69 aa7.95□□□□□ -1.14
NUP50-201ENST00000347635 CAMK2N1Q7Z7J9 78 aa7.93□□□□□ -1.14
NUP50-201ENST00000347635 H0YAA0 97 aa7.91□□□□□ -1.14
NUP50-201ENST00000347635 M0QZ58 72 aa7.89□□□□□ -1.15
NUP50-201ENST00000347635 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
NUP50-201ENST00000347635 TENM2Q9NT68 2774 aa7.83□□□□□ -1.16
NUP50-201ENST00000347635 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
NUP50-201ENST00000347635 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
NUP50-201ENST00000347635 AKAP9Q99996 3911 aa7.79□□□□□ -1.16
NUP50-201ENST00000347635 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
NUP50-201ENST00000347635 PKD1L1Q8TDX9 2849 aa7.77□□□□□ -1.17
NUP50-201ENST00000347635 XP32Q5T750 250 aa7.76□□□□□ -1.17
NUP50-201ENST00000347635 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
NUP50-201ENST00000347635 TGP01266 2768 aa7.71□□□□□ -1.17
NUP50-201ENST00000347635 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
NUP50-201ENST00000347635 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
NUP50-201ENST00000347635 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
NUP50-201ENST00000347635 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
NUP50-201ENST00000347635 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
NUP50-201ENST00000347635 HUWE1Q7Z6Z7 4374 aaKnown RBP7.6□□□□□ -1.19
NUP50-201ENST00000347635 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
NUP50-201ENST00000347635 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
NUP50-201ENST00000347635 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
NUP50-201ENST00000347635 P0C880 135 aa7.51□□□□□ -1.21
NUP50-201ENST00000347635 MEGF8Q7Z7M0 2845 aa7.36□□□□□ -1.23
NUP50-201ENST00000347635 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
NUP50-201ENST00000347635 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
NUP50-201ENST00000347635 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
NUP50-201ENST00000347635 TNP1P09430 55 aa7.27□□□□□ -1.24
NUP50-201ENST00000347635 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
NUP50-201ENST00000347635 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
NUP50-201ENST00000347635 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
NUP50-201ENST00000347635 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
NUP50-201ENST00000347635 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
NUP50-201ENST00000347635 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
NUP50-201ENST00000347635 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
NUP50-201ENST00000347635 KRTAP10-4P60372 401 aaPredicted RBP7.19□□□□□ -1.26
NUP50-201ENST00000347635 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
NUP50-201ENST00000347635 ALMS1Q8TCU4 4167 aa7.17□□□□□ -1.26
NUP50-201ENST00000347635 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
NUP50-201ENST00000347635 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
NUP50-201ENST00000347635 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
NUP50-201ENST00000347635 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
NUP50-201ENST00000347635 COL7A1Q02388 2944 aa7.06□□□□□ -1.28
NUP50-201ENST00000347635 DNAH3Q8TD57 4116 aa7.04□□□□□ -1.28
NUP50-201ENST00000347635 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms