RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
TPM4-202ENST00000344824 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
TPM4-202ENST00000344824 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
TPM4-202ENST00000344824 Q6ZVQ6 151 aa7.76□□□□□ -1.17
TPM4-202ENST00000344824 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
TPM4-202ENST00000344824 Q5XG85 94 aa7.73□□□□□ -1.17
TPM4-202ENST00000344824 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
TPM4-202ENST00000344824 C1orf195Q5TG92 126 aa7.72□□□□□ -1.17
TPM4-202ENST00000344824 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.17
TPM4-202ENST00000344824 Q96NJ1 140 aa7.71□□□□□ -1.17
TPM4-202ENST00000344824 MUC2Q02817 5179 aa7.7□□□□□ -1.18
TPM4-202ENST00000344824 IGKV4-1P06312 121 aa7.7□□□□□ -1.18
TPM4-202ENST00000344824 SIGMAR1Q99720 223 aa7.7□□□□□ -1.18
TPM4-202ENST00000344824 LINC00472Q9H8W2 130 aa7.7□□□□□ -1.18
TPM4-202ENST00000344824 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
TPM4-202ENST00000344824 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
TPM4-202ENST00000344824 BPY2O14599 106 aa7.69□□□□□ -1.18
TPM4-202ENST00000344824 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
TPM4-202ENST00000344824 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
TPM4-202ENST00000344824 J3KT08 172 aa7.64□□□□□ -1.19
TPM4-202ENST00000344824 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
TPM4-202ENST00000344824 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
TPM4-202ENST00000344824 DSCR10P59022 87 aa7.62□□□□□ -1.19
TPM4-202ENST00000344824 Q8N9L7 120 aa7.62□□□□□ -1.19
TPM4-202ENST00000344824 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
TPM4-202ENST00000344824 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
TPM4-202ENST00000344824 IGHV6-1A0A0B4J1U7 121 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 A8MWP4 228 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 K7EQZ3 153 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 NDUFB1O75438 58 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 CXCL6P80162 114 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
TPM4-202ENST00000344824 A0A1B0GVX0 72 aa7.58□□□□□ -1.2
TPM4-202ENST00000344824 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
TPM4-202ENST00000344824 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
TPM4-202ENST00000344824 HIST1H4AP62805 103 aaKnown RBP7.56□□□□□ -1.2
TPM4-202ENST00000344824 PRR15Q8IV56 129 aa7.56□□□□□ -1.2
TPM4-202ENST00000344824 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
TPM4-202ENST00000344824 NOTCH2NLQ7Z3S9 236 aa7.53□□□□□ -1.2
TPM4-202ENST00000344824 C8orf17Q9NRJ1 99 aa7.52□□□□□ -1.21
TPM4-202ENST00000344824 A0A087WVE0 104 aa7.51□□□□□ -1.21
TPM4-202ENST00000344824 LINC00313P59037 77 aa7.51□□□□□ -1.21
TPM4-202ENST00000344824 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
TPM4-202ENST00000344824 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
TPM4-202ENST00000344824 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
TPM4-202ENST00000344824 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
TPM4-202ENST00000344824 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
TPM4-202ENST00000344824 HCG22E2RYF7 251 aa7.47□□□□□ -1.21
TPM4-202ENST00000344824 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.21
TPM4-202ENST00000344824 hDV103S1A0JD37 113 aa7.45□□□□□ -1.22
TPM4-202ENST00000344824 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
TPM4-202ENST00000344824 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
TPM4-202ENST00000344824 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
TPM4-202ENST00000344824 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
TPM4-202ENST00000344824 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
TPM4-202ENST00000344824 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
TPM4-202ENST00000344824 NDUFS5O43920 106 aa7.4□□□□□ -1.22
TPM4-202ENST00000344824 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
TPM4-202ENST00000344824 FAM236AA0A1B0GUQ0 79 aa7.37□□□□□ -1.23
TPM4-202ENST00000344824 FAM236BA0A1B0GV22 79 aa7.37□□□□□ -1.23
TPM4-202ENST00000344824 SVIPQ8NHG7 77 aa7.36□□□□□ -1.23
TPM4-202ENST00000344824 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
TPM4-202ENST00000344824 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
TPM4-202ENST00000344824 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
TPM4-202ENST00000344824 A8MUU9 505 aa7.34□□□□□ -1.23
TPM4-202ENST00000344824 Q8N9P0 234 aaPredicted RBP7.34□□□□□ -1.23
TPM4-202ENST00000344824 Q75L30 129 aa7.32□□□□□ -1.24
TPM4-202ENST00000344824 ATP11AUNQ6ZP68 121 aa7.29□□□□□ -1.24
TPM4-202ENST00000344824 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
TPM4-202ENST00000344824 ATOX1O00244 68 aa7.25□□□□□ -1.25
TPM4-202ENST00000344824 TP53AIP1Q9HCN2 124 aa7.25□□□□□ -1.25
TPM4-202ENST00000344824 Q5W150 140 aa7.24□□□□□ -1.25
TPM4-202ENST00000344824 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
TPM4-202ENST00000344824 OCR1Q9BZK8 76 aa7.24□□□□□ -1.25
TPM4-202ENST00000344824 UQCRQO14949 82 aa7.22□□□□□ -1.25
TPM4-202ENST00000344824 KRTAP19-2Q3LHN2 52 aa7.2□□□□□ -1.26
TPM4-202ENST00000344824 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
TPM4-202ENST00000344824 SMIM20Q8N5G0 67 aa7.19□□□□□ -1.26
TPM4-202ENST00000344824 TRAV7A0A075B6U4 112 aa7.18□□□□□ -1.26
TPM4-202ENST00000344824 H0Y9P7 68 aa7.18□□□□□ -1.26
TPM4-202ENST00000344824 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
TPM4-202ENST00000344824 MT1HP80294 61 aa7.16□□□□□ -1.26
TPM4-202ENST00000344824 H3BS24 57 aa7.15□□□□□ -1.27
TPM4-202ENST00000344824 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.27
TPM4-202ENST00000344824 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
TPM4-202ENST00000344824 IGKV2-30P06310 120 aa7.14□□□□□ -1.27
TPM4-202ENST00000344824 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
TPM4-202ENST00000344824 M0R2T5 61 aa7.13□□□□□ -1.27
TPM4-202ENST00000344824 MP68P56378 58 aa7.13□□□□□ -1.27
TPM4-202ENST00000344824 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
TPM4-202ENST00000344824 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
TPM4-202ENST00000344824 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
TPM4-202ENST00000344824 SPINK7P58062 85 aa7.1□□□□□ -1.27
TPM4-202ENST00000344824 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
TPM4-202ENST00000344824 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.28
TPM4-202ENST00000344824 COX7CP15954 63 aa7.08□□□□□ -1.28
TPM4-202ENST00000344824 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
TPM4-202ENST00000344824 LOC101927531A0A1B0GV80 90 aa7.07□□□□□ -1.28
TPM4-202ENST00000344824 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
TPM4-202ENST00000344824 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms