RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 A0A096LNI7 61 aa9.31□□□□□ -0.92
LIMK2-203ENST00000340552 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
LIMK2-203ENST00000340552 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-203ENST00000340552 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.92
LIMK2-203ENST00000340552 SPRR1BP22528 89 aa9.27□□□□□ -0.93
LIMK2-203ENST00000340552 Q96NJ1 140 aa9.27□□□□□ -0.93
LIMK2-203ENST00000340552 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
LIMK2-203ENST00000340552 RTL8CO15255 209 aa9.26□□□□□ -0.93
LIMK2-203ENST00000340552 FBN3Q75N90 2809 aa9.26□□□□□ -0.93
LIMK2-203ENST00000340552 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
LIMK2-203ENST00000340552 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
LIMK2-203ENST00000340552 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
LIMK2-203ENST00000340552 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
LIMK2-203ENST00000340552 TGP01266 2768 aa9.19□□□□□ -0.94
LIMK2-203ENST00000340552 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
LIMK2-203ENST00000340552 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
LIMK2-203ENST00000340552 A0A087WTM6 91 aa9.16□□□□□ -0.94
LIMK2-203ENST00000340552 A0A1B0GVX0 72 aa9.16□□□□□ -0.94
LIMK2-203ENST00000340552 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
LIMK2-203ENST00000340552 A0A087X002 238 aa9.15□□□□□ -0.95
LIMK2-203ENST00000340552 LY6G6CO95867 125 aa9.15□□□□□ -0.95
LIMK2-203ENST00000340552 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.95
LIMK2-203ENST00000340552 CSAG1Q6PB30 78 aa9.14□□□□□ -0.95
LIMK2-203ENST00000340552 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
LIMK2-203ENST00000340552 ACYP2P14621 99 aa9.13□□□□□ -0.95
LIMK2-203ENST00000340552 A0A1B0GU69 56 aa9.12□□□□□ -0.95
LIMK2-203ENST00000340552 Q5W150 140 aa9.12□□□□□ -0.95
LIMK2-203ENST00000340552 C1orf134Q5TEV5 83 aa9.11□□□□□ -0.95
LIMK2-203ENST00000340552 PANO1I0J062 215 aa9.11□□□□□ -0.95
LIMK2-203ENST00000340552 IGLV9-49A0A0B4J1Y8 123 aa9.1□□□□□ -0.95
LIMK2-203ENST00000340552 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
LIMK2-203ENST00000340552 HECTD4Q9Y4D8 3996 aa9.09□□□□□ -0.95
LIMK2-203ENST00000340552 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
LIMK2-203ENST00000340552 KRTAP13-3Q3SY46 172 aa9.08□□□□□ -0.96
LIMK2-203ENST00000340552 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
LIMK2-203ENST00000340552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-203ENST00000340552 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
LIMK2-203ENST00000340552 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
LIMK2-203ENST00000340552 CDK2AP2O75956 126 aa9.05□□□□□ -0.96
LIMK2-203ENST00000340552 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
LIMK2-203ENST00000340552 UQCR11O14957 56 aa9.03□□□□□ -0.96
LIMK2-203ENST00000340552 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
LIMK2-203ENST00000340552 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
LIMK2-203ENST00000340552 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
LIMK2-203ENST00000340552 FRAS1Q86XX4 4008 aa8.97□□□□□ -0.97
LIMK2-203ENST00000340552 ZNF861PO60384 105 aa8.95□□□□□ -0.98
LIMK2-203ENST00000340552 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
LIMK2-203ENST00000340552 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
LIMK2-203ENST00000340552 DNAH11Q96DT5 4516 aa8.92□□□□□ -0.98
LIMK2-203ENST00000340552 KRTAP10-2P60368 255 aa8.91□□□□□ -0.98
LIMK2-203ENST00000340552 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
LIMK2-203ENST00000340552 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
LIMK2-203ENST00000340552 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
LIMK2-203ENST00000340552 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
LIMK2-203ENST00000340552 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
LIMK2-203ENST00000340552 SACSQ9NZJ4 4579 aa8.84□□□□□ -0.99
LIMK2-203ENST00000340552 PKD1P98161 4303 aa8.83□□□□□ -1
LIMK2-203ENST00000340552 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
LIMK2-203ENST00000340552 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
LIMK2-203ENST00000340552 IGLV7-43P04211 117 aa8.81□□□□□ -1
LIMK2-203ENST00000340552 IGKV2-30P06310 120 aa8.81□□□□□ -1
LIMK2-203ENST00000340552 ROMO1P60602 79 aa8.79□□□□□ -1
LIMK2-203ENST00000340552 KRTAP10-1P60331 282 aa8.79□□□□□ -1
LIMK2-203ENST00000340552 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
LIMK2-203ENST00000340552 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
LIMK2-203ENST00000340552 Q6ZSA8 131 aa8.77□□□□□ -1.01
LIMK2-203ENST00000340552 A8MUU9 505 aa8.73□□□□□ -1.01
LIMK2-203ENST00000340552 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
LIMK2-203ENST00000340552 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
LIMK2-203ENST00000340552 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
LIMK2-203ENST00000340552 IGKV2D-30A0A075B6S6 120 aa8.67□□□□□ -1.02
LIMK2-203ENST00000340552 H0YAA0 97 aa8.66□□□□□ -1.02
LIMK2-203ENST00000340552 SPINK1P00995 79 aa8.66□□□□□ -1.02
LIMK2-203ENST00000340552 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
LIMK2-203ENST00000340552 RYR2Q92736 4967 aa8.61□□□□□ -1.03
LIMK2-203ENST00000340552 P0C880 135 aa8.61□□□□□ -1.03
LIMK2-203ENST00000340552 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
LIMK2-203ENST00000340552 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
LIMK2-203ENST00000340552 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.04
LIMK2-203ENST00000340552 KMT2CQ8NEZ4 4911 aaKnown RBP8.58□□□□□ -1.04
LIMK2-203ENST00000340552 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
LIMK2-203ENST00000340552 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
LIMK2-203ENST00000340552 Q8N1X5 172 aa8.54□□□□□ -1.04
LIMK2-203ENST00000340552 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
LIMK2-203ENST00000340552 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
LIMK2-203ENST00000340552 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
LIMK2-203ENST00000340552 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
LIMK2-203ENST00000340552 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
LIMK2-203ENST00000340552 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
LIMK2-203ENST00000340552 A0A1B0GU33 70 aa8.46□□□□□ -1.05
LIMK2-203ENST00000340552 FAT1Q14517 4588 aa8.42□□□□□ -1.06
LIMK2-203ENST00000340552 H1FX-AS1Q4G0G2 97 aa8.41□□□□□ -1.06
LIMK2-203ENST00000340552 RYR3Q15413 4870 aa8.36□□□□□ -1.07
LIMK2-203ENST00000340552 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
LIMK2-203ENST00000340552 K7ERS5 55 aa8.3□□□□□ -1.08
LIMK2-203ENST00000340552 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
LIMK2-203ENST00000340552 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
LIMK2-203ENST00000340552 NDUFAF8A1L188 74 aa8.24□□□□□ -1.09
LIMK2-203ENST00000340552 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
LIMK2-203ENST00000340552 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms