RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 SNURFQ9Y675 71 aa16.11■□□□□ 0.17
SCARA3-202ENST00000337221 SPINK1P00995 79 aa16.09■□□□□ 0.17
SCARA3-202ENST00000337221 PKHD1L1Q86WI1 4243 aa16.08■□□□□ 0.17
SCARA3-202ENST00000337221 FAM229AH3BQW9 127 aa16.07■□□□□ 0.16
SCARA3-202ENST00000337221 NOTCH2NLQ7Z3S9 236 aa16.07■□□□□ 0.16
SCARA3-202ENST00000337221 HSPG2P98160 4391 aa16.06■□□□□ 0.16
SCARA3-202ENST00000337221 A0A0U1RQV1 116 aa16.06■□□□□ 0.16
SCARA3-202ENST00000337221 LINC00304Q8N9R0 145 aa16.06■□□□□ 0.16
SCARA3-202ENST00000337221 C5orf47Q569G3 176 aa16.02■□□□□ 0.15
SCARA3-202ENST00000337221 H7BZZ5 65 aa16■□□□□ 0.15
SCARA3-202ENST00000337221 SPAG11AQ6PDA7 123 aa16■□□□□ 0.15
SCARA3-202ENST00000337221 RPS29P62273 56 aaKnown RBP15.99■□□□□ 0.15
SCARA3-202ENST00000337221 RYR1P21817 5038 aa15.98■□□□□ 0.15
SCARA3-202ENST00000337221 Q5VSD8 79 aa15.98■□□□□ 0.15
SCARA3-202ENST00000337221 TMEM258P61165 79 aa15.98■□□□□ 0.15
SCARA3-202ENST00000337221 MRPL34Q9BQ48 92 aaKnown RBP15.96■□□□□ 0.15
SCARA3-202ENST00000337221 C8orf87E5RJ46 101 aa15.95■□□□□ 0.14
SCARA3-202ENST00000337221 NDUFC1O43677 76 aa15.92■□□□□ 0.14
SCARA3-202ENST00000337221 ZCCHC13Q8WW36 166 aaKnown RBP15.91■□□□□ 0.14
SCARA3-202ENST00000337221 TP53AIP1Q9HCN2 124 aa15.89■□□□□ 0.13
SCARA3-202ENST00000337221 KRTAP17-1Q9BYP8 105 aa15.88■□□□□ 0.13
SCARA3-202ENST00000337221 H0Y9P7 68 aa15.86■□□□□ 0.13
SCARA3-202ENST00000337221 MP68P56378 58 aa15.86■□□□□ 0.13
SCARA3-202ENST00000337221 LINC00313P59037 77 aa15.86■□□□□ 0.13
SCARA3-202ENST00000337221 NDUFS5O43920 106 aa15.84■□□□□ 0.13
SCARA3-202ENST00000337221 TRAV22A0A0B4J277 110 aa15.82■□□□□ 0.12
SCARA3-202ENST00000337221 LINC00208Q96KT6 92 aa15.79■□□□□ 0.12
SCARA3-202ENST00000337221 H3BPC8 53 aa15.78■□□□□ 0.12
SCARA3-202ENST00000337221 EPPK1P58107 5090 aaKnown RBP15.78■□□□□ 0.12
SCARA3-202ENST00000337221 KIAA1109Q2LD37 5005 aa15.78■□□□□ 0.12
SCARA3-202ENST00000337221 FAM236DA0A1B0GTK5 79 aa15.76■□□□□ 0.11
SCARA3-202ENST00000337221 FAM236CP0DP71 79 aa15.76■□□□□ 0.11
SCARA3-202ENST00000337221 KRTAP16-1A8MUX0 517 aa15.75■□□□□ 0.11
SCARA3-202ENST00000337221 KRTAP10-8P60410 259 aa15.72■□□□□ 0.11
SCARA3-202ENST00000337221 Q8N9P0 234 aaPredicted RBP15.71■□□□□ 0.11
SCARA3-202ENST00000337221 Q8N1X5 172 aa15.7■□□□□ 0.1
SCARA3-202ENST00000337221 C1orf64Q8NEQ6 169 aa15.7■□□□□ 0.1
SCARA3-202ENST00000337221 LRP1Q07954 4544 aaKnown RBP15.7■□□□□ 0.1
SCARA3-202ENST00000337221 TNXBP22105 4242 aa15.69■□□□□ 0.1
SCARA3-202ENST00000337221 KRTAP13-3Q3SY46 172 aa15.64■□□□□ 0.09
SCARA3-202ENST00000337221 Q5W150 140 aa15.64■□□□□ 0.09
SCARA3-202ENST00000337221 FLG2Q5D862 2391 aaPredicted RBP15.63■□□□□ 0.09
SCARA3-202ENST00000337221 ATP5EP56381 51 aaPredicted RBP15.62■□□□□ 0.09
SCARA3-202ENST00000337221 FAT3Q8TDW7 4589 aa15.61■□□□□ 0.09
SCARA3-202ENST00000337221 RPS28P62857 69 aaKnown RBP15.58■□□□□ 0.08
SCARA3-202ENST00000337221 RETNLBQ9BQ08 111 aa15.56■□□□□ 0.08
SCARA3-202ENST00000337221 SERP1Q9Y6X1 66 aa15.49■□□□□ 0.07
SCARA3-202ENST00000337221 OXTP01178 125 aa15.47■□□□□ 0.07
SCARA3-202ENST00000337221 LOC101927531A0A1B0GV80 90 aa15.47■□□□□ 0.07
SCARA3-202ENST00000337221 MT1HL1P0DM35 61 aa15.45■□□□□ 0.06
SCARA3-202ENST00000337221 SPANXA2-OT1Q8N9U9 137 aa15.44■□□□□ 0.06
SCARA3-202ENST00000337221 PCOTHQ58A44 107 aa15.43■□□□□ 0.06
SCARA3-202ENST00000337221 C9orf92A6NGG3 77 aa15.43■□□□□ 0.06
SCARA3-202ENST00000337221 CYP4F30PQ9H0H9 118 aa15.41■□□□□ 0.06
SCARA3-202ENST00000337221 PRR4Q16378 134 aa15.4■□□□□ 0.06
SCARA3-202ENST00000337221 MYCBP2O75592 4640 aa15.39■□□□□ 0.05
SCARA3-202ENST00000337221 DMBT1Q9UGM3 2413 aaPredicted RBP15.34■□□□□ 0.05
SCARA3-202ENST00000337221 C20orf166-AS1Q96NR2 134 aa15.33■□□□□ 0.05
SCARA3-202ENST00000337221 KRTAP4-5Q9BYR2 181 aa15.33■□□□□ 0.05
SCARA3-202ENST00000337221 IGLV7-46A0A075B6I9 117 aa15.33■□□□□ 0.04
SCARA3-202ENST00000337221 A8MUU9 505 aa15.32■□□□□ 0.04
SCARA3-202ENST00000337221 IGKV2-30P06310 120 aa15.32■□□□□ 0.04
SCARA3-202ENST00000337221 FP248Q71RG6 208 aaPredicted RBP15.29■□□□□ 0.04
SCARA3-202ENST00000337221 IGKV2D-30A0A075B6S6 120 aa15.17■□□□□ 0.02
SCARA3-202ENST00000337221 HRES1P13985 223 aa15.15■□□□□ 0.02
SCARA3-202ENST00000337221 Q75L30 129 aa15.14■□□□□ 0.01
SCARA3-202ENST00000337221 SMIM26A0A096LP01 95 aa15.11■□□□□ 0.01
SCARA3-202ENST00000337221 BIRC6Q9NR09 4857 aa15.08■□□□□ 0
SCARA3-202ENST00000337221 C7orf65Q6ZTY9 151 aa15.06■□□□□ 0
SCARA3-202ENST00000337221 COA5Q86WW8 74 aa15.02□□□□□ -0.01
SCARA3-202ENST00000337221 ABCA13Q86UQ4 5058 aa14.99□□□□□ -0.01
SCARA3-202ENST00000337221 HERC2O95714 4834 aa14.99□□□□□ -0.01
SCARA3-202ENST00000337221 XP32Q5T750 250 aa14.98□□□□□ -0.01
SCARA3-202ENST00000337221 DMAC1Q96GE9 116 aa14.96□□□□□ -0.01
SCARA3-202ENST00000337221 RPL37P61927 97 aaKnown RBP14.94□□□□□ -0.02
SCARA3-202ENST00000337221 ACYP2P14621 99 aa14.88□□□□□ -0.03
SCARA3-202ENST00000337221 ATP11AUNQ6ZP68 121 aa14.88□□□□□ -0.03
SCARA3-202ENST00000337221 SPINK7P58062 85 aa14.87□□□□□ -0.03
SCARA3-202ENST00000337221 MPLKIPQ8TAP9 179 aa14.84□□□□□ -0.03
SCARA3-202ENST00000337221 TPRXLQ17RH7 258 aa14.83□□□□□ -0.04
SCARA3-202ENST00000337221 C4orf26Q17RF5 130 aa14.82□□□□□ -0.04
SCARA3-202ENST00000337221 J3QL48 77 aa14.78□□□□□ -0.04
SCARA3-202ENST00000337221 Q1T7F1 81 aa14.76□□□□□ -0.05
SCARA3-202ENST00000337221 A8MUN3 132 aa14.68□□□□□ -0.06
SCARA3-202ENST00000337221 CHKB-CPT1BH3BT56 60 aa14.64□□□□□ -0.07
SCARA3-202ENST00000337221 V9GYY9 64 aa14.63□□□□□ -0.07
SCARA3-202ENST00000337221 KRTAP3-1Q9BYR8 98 aa14.62□□□□□ -0.07
SCARA3-202ENST00000337221 LPAP08519 4548 aa14.58□□□□□ -0.08
SCARA3-202ENST00000337221 LRP2P98164 4655 aa14.56□□□□□ -0.08
SCARA3-202ENST00000337221 COX6B2Q6YFQ2 88 aa14.53□□□□□ -0.08
SCARA3-202ENST00000337221 PSPHP1O15172 72 aa14.51□□□□□ -0.09
SCARA3-202ENST00000337221 LINC01558Q9Y6Z2 57 aa14.5□□□□□ -0.09
SCARA3-202ENST00000337221 PRR15LQ9BU68 103 aa14.43□□□□□ -0.1
SCARA3-202ENST00000337221 Q5VV11 94 aa14.39□□□□□ -0.11
SCARA3-202ENST00000337221 PCLOQ9Y6V0 5065 aa14.32□□□□□ -0.12
SCARA3-202ENST00000337221 SEC61BP60468 96 aaKnown RBP14.28□□□□□ -0.12
SCARA3-202ENST00000337221 SPTSSBQ8NFR3 76 aa14.25□□□□□ -0.13
SCARA3-202ENST00000337221 A0A1B0GU69 56 aa14.15□□□□□ -0.14
SCARA3-202ENST00000337221 BRK1Q8WUW1 75 aa14.11□□□□□ -0.15
SCARA3-202ENST00000337221 RBM12B-AS1Q9P1G2 102 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms