RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
DDX28-201ENST00000332395 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
DDX28-201ENST00000332395 A8MUN3 132 aa10.28□□□□□ -0.76
DDX28-201ENST00000332395 H3BPC8 53 aa10.28□□□□□ -0.76
DDX28-201ENST00000332395 PMAIP1Q13794 54 aa10.27□□□□□ -0.77
DDX28-201ENST00000332395 LRP1BQ9NZR2 4599 aa10.27□□□□□ -0.77
DDX28-201ENST00000332395 H0Y9P7 68 aa10.26□□□□□ -0.77
DDX28-201ENST00000332395 A0A1B0GVX0 72 aa10.25□□□□□ -0.77
DDX28-201ENST00000332395 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
DDX28-201ENST00000332395 C8orf17Q9NRJ1 99 aa10.25□□□□□ -0.77
DDX28-201ENST00000332395 Q5VV11 94 aa10.24□□□□□ -0.77
DDX28-201ENST00000332395 IGHV6-1A0A0B4J1U7 121 aa10.24□□□□□ -0.77
DDX28-201ENST00000332395 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
DDX28-201ENST00000332395 SSBP3-AS1Q7Z2R9 100 aa10.24□□□□□ -0.77
DDX28-201ENST00000332395 CD164Q04900 197 aa10.22□□□□□ -0.77
DDX28-201ENST00000332395 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.78
DDX28-201ENST00000332395 A0A087X002 238 aa10.19□□□□□ -0.78
DDX28-201ENST00000332395 LIMD2Q9BT23 127 aa10.18□□□□□ -0.78
DDX28-201ENST00000332395 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
DDX28-201ENST00000332395 SACSQ9NZJ4 4579 aa10.17□□□□□ -0.78
DDX28-201ENST00000332395 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
DDX28-201ENST00000332395 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
DDX28-201ENST00000332395 A8MU10 97 aa10.15□□□□□ -0.78
DDX28-201ENST00000332395 NOTCH2NLQ7Z3S9 236 aa10.15□□□□□ -0.79
DDX28-201ENST00000332395 VPS13BQ7Z7G8 4022 aa10.14□□□□□ -0.79
DDX28-201ENST00000332395 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
DDX28-201ENST00000332395 CHKB-CPT1BH3BT56 60 aa10.12□□□□□ -0.79
DDX28-201ENST00000332395 NDUFS5O43920 106 aa10.12□□□□□ -0.79
DDX28-201ENST00000332395 PRR15LQ9BU68 103 aa10.12□□□□□ -0.79
DDX28-201ENST00000332395 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
DDX28-201ENST00000332395 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
DDX28-201ENST00000332395 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
DDX28-201ENST00000332395 COA5Q86WW8 74 aa10.09□□□□□ -0.79
DDX28-201ENST00000332395 Q75L30 129 aa10.07□□□□□ -0.8
DDX28-201ENST00000332395 LOC101927531A0A1B0GV80 90 aa10.07□□□□□ -0.8
DDX28-201ENST00000332395 C8orf87E5RJ46 101 aa10.02□□□□□ -0.81
DDX28-201ENST00000332395 LCA10Q71F78 164 aa10.02□□□□□ -0.81
DDX28-201ENST00000332395 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
DDX28-201ENST00000332395 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
DDX28-201ENST00000332395 ATP11AUNQ6ZP68 121 aa9.99□□□□□ -0.81
DDX28-201ENST00000332395 A6NED7 52 aa9.98□□□□□ -0.81
DDX28-201ENST00000332395 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
DDX28-201ENST00000332395 LINC00313P59037 77 aa9.96□□□□□ -0.82
DDX28-201ENST00000332395 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
DDX28-201ENST00000332395 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.82
DDX28-201ENST00000332395 TYMSOSQ8TAI1 123 aa9.96□□□□□ -0.82
DDX28-201ENST00000332395 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
DDX28-201ENST00000332395 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
DDX28-201ENST00000332395 Q5W150 140 aa9.94□□□□□ -0.82
DDX28-201ENST00000332395 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
DDX28-201ENST00000332395 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
DDX28-201ENST00000332395 KRTAP13-3Q3SY46 172 aa9.92□□□□□ -0.82
DDX28-201ENST00000332395 SMR3BP02814 79 aaPredicted RBP9.91□□□□□ -0.82
DDX28-201ENST00000332395 A6NN06 94 aa9.9□□□□□ -0.82
DDX28-201ENST00000332395 SPINK1P00995 79 aa9.9□□□□□ -0.83
DDX28-201ENST00000332395 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.83
DDX28-201ENST00000332395 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
DDX28-201ENST00000332395 APOBP04114 4563 aaKnown RBP9.87□□□□□ -0.83
DDX28-201ENST00000332395 HRES1P13985 223 aa9.87□□□□□ -0.83
DDX28-201ENST00000332395 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
DDX28-201ENST00000332395 RYR2Q92736 4967 aa9.84□□□□□ -0.83
DDX28-201ENST00000332395 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
DDX28-201ENST00000332395 FAT1Q14517 4588 aa9.83□□□□□ -0.84
DDX28-201ENST00000332395 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
DDX28-201ENST00000332395 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
DDX28-201ENST00000332395 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
DDX28-201ENST00000332395 SPINK7P58062 85 aa9.8□□□□□ -0.84
DDX28-201ENST00000332395 RPS29P62273 56 aaKnown RBP9.8□□□□□ -0.84
DDX28-201ENST00000332395 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
DDX28-201ENST00000332395 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
DDX28-201ENST00000332395 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
DDX28-201ENST00000332395 PKHD1L1Q86WI1 4243 aa9.72□□□□□ -0.85
DDX28-201ENST00000332395 IGKV2-30P06310 120 aa9.71□□□□□ -0.85
DDX28-201ENST00000332395 ACYP2P14621 99 aa9.65□□□□□ -0.86
DDX28-201ENST00000332395 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
DDX28-201ENST00000332395 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
DDX28-201ENST00000332395 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
DDX28-201ENST00000332395 HSPG2P98160 4391 aa9.51□□□□□ -0.89
DDX28-201ENST00000332395 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
DDX28-201ENST00000332395 A0A1B0GU69 56 aa9.49□□□□□ -0.89
DDX28-201ENST00000332395 A8MUU9 505 aa9.49□□□□□ -0.89
DDX28-201ENST00000332395 RYR3Q15413 4870 aa9.49□□□□□ -0.89
DDX28-201ENST00000332395 Q5VSD8 79 aa9.48□□□□□ -0.89
DDX28-201ENST00000332395 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
DDX28-201ENST00000332395 TNXBP22105 4242 aa9.45□□□□□ -0.9
DDX28-201ENST00000332395 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
DDX28-201ENST00000332395 Q8N1X5 172 aa9.45□□□□□ -0.9
DDX28-201ENST00000332395 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
DDX28-201ENST00000332395 PRAC1Q96KF2 57 aa9.44□□□□□ -0.9
DDX28-201ENST00000332395 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
DDX28-201ENST00000332395 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
DDX28-201ENST00000332395 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
DDX28-201ENST00000332395 RYR1P21817 5038 aa9.38□□□□□ -0.91
DDX28-201ENST00000332395 MIR22HGQ0VDD5 57 aa9.37□□□□□ -0.91
DDX28-201ENST00000332395 H3BS24 57 aa9.37□□□□□ -0.91
DDX28-201ENST00000332395 UQCR11O14957 56 aa9.36□□□□□ -0.91
DDX28-201ENST00000332395 KRTAP17-1Q9BYP8 105 aa9.33□□□□□ -0.92
DDX28-201ENST00000332395 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
DDX28-201ENST00000332395 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
DDX28-201ENST00000332395 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms