RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RPS29P62273 56 aaKnown RBP3.67□□□□□ -1.82
SMG1-201ENST00000330588 CXCL6P80162 114 aa3.67□□□□□ -1.82
SMG1-201ENST00000330588 HIGD2AQ9BW72 106 aa3.67□□□□□ -1.82
SMG1-201ENST00000330588 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
SMG1-201ENST00000330588 CCKP06307 115 aa3.66□□□□□ -1.82
SMG1-201ENST00000330588 PRR4Q16378 134 aa3.66□□□□□ -1.82
SMG1-201ENST00000330588 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
SMG1-201ENST00000330588 Q6ZRX8 168 aa3.66□□□□□ -1.82
SMG1-201ENST00000330588 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 NDUFC1O43677 76 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 C6orf99Q4VX62 202 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 SMCR5Q8TEV8 140 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 LITAFQ99732 161 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.82
SMG1-201ENST00000330588 K7ERJ3 54 aa3.64□□□□□ -1.83
SMG1-201ENST00000330588 SPINK1P00995 79 aa3.64□□□□□ -1.83
SMG1-201ENST00000330588 S100A7L2Q5SY68 101 aa3.64□□□□□ -1.83
SMG1-201ENST00000330588 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
SMG1-201ENST00000330588 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
SMG1-201ENST00000330588 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 SLC25A20O43772 301 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 SOSTDC1Q6X4U4 206 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 SMIM29Q86T20 159 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 DAND5Q8N907 189 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 Q9BRP9 147 aa3.63□□□□□ -1.83
SMG1-201ENST00000330588 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 ZNF815PA8K554 130 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 H7BZZ5 65 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 SPRR1BP22528 89 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 Q1T7F1 81 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 ATP11AUNQ6ZP68 121 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
SMG1-201ENST00000330588 MT3P25713 68 aa3.61□□□□□ -1.83
SMG1-201ENST00000330588 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
SMG1-201ENST00000330588 IGLV7-46A0A075B6I9 117 aa3.6□□□□□ -1.83
SMG1-201ENST00000330588 A6NN06 94 aa3.6□□□□□ -1.83
SMG1-201ENST00000330588 Q8NBF4 154 aa3.6□□□□□ -1.83
SMG1-201ENST00000330588 TRAV13-2A0A0B4J235 113 aa3.59□□□□□ -1.83
SMG1-201ENST00000330588 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
SMG1-201ENST00000330588 ELOF1P60002 83 aaKnown RBP3.59□□□□□ -1.83
SMG1-201ENST00000330588 HIST1H4GQ99525 98 aa3.59□□□□□ -1.83
SMG1-201ENST00000330588 A0A0B4J2C4 111 aa3.58□□□□□ -1.84
SMG1-201ENST00000330588 MOBPQ13875 183 aa3.58□□□□□ -1.84
SMG1-201ENST00000330588 ASB16-AS1Q495Z4 193 aa3.58□□□□□ -1.84
SMG1-201ENST00000330588 Q8N377 158 aa3.58□□□□□ -1.84
SMG1-201ENST00000330588 RETNLBQ9BQ08 111 aa3.58□□□□□ -1.84
SMG1-201ENST00000330588 COX7BP24311 80 aa3.57□□□□□ -1.84
SMG1-201ENST00000330588 RBM3P98179 157 aaKnown RBP3.57□□□□□ -1.84
SMG1-201ENST00000330588 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
SMG1-201ENST00000330588 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
SMG1-201ENST00000330588 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
SMG1-201ENST00000330588 IGLV9-49A0A0B4J1Y8 123 aa3.56□□□□□ -1.84
SMG1-201ENST00000330588 A0A1B0GW54 56 aa3.56□□□□□ -1.84
SMG1-201ENST00000330588 ATXN8Q156A1 80 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 Q6JHZ5 121 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 IGLV5-48A0A075B6I7 105 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 TEX49A0A1B0GTD5 131 aa3.55□□□□□ -1.84
SMG1-201ENST00000330588 MUSTN1Q8IVN3 82 aa3.54□□□□□ -1.84
SMG1-201ENST00000330588 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
SMG1-201ENST00000330588 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
SMG1-201ENST00000330588 CLEC2BQ92478 149 aa3.53□□□□□ -1.84
SMG1-201ENST00000330588 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
SMG1-201ENST00000330588 ATP5EP2Q5VTU8 51 aa3.51□□□□□ -1.85
SMG1-201ENST00000330588 SMIM11BQ8TCY0 68 aa3.51□□□□□ -1.85
SMG1-201ENST00000330588 LRP2P98164 4655 aa3.51□□□□□ -1.85
SMG1-201ENST00000330588 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
SMG1-201ENST00000330588 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
SMG1-201ENST00000330588 H7C2G1 150 aa3.5□□□□□ -1.85
SMG1-201ENST00000330588 LINC00575Q6W349 94 aa3.5□□□□□ -1.85
SMG1-201ENST00000330588 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
SMG1-201ENST00000330588 Q1RN00 199 aa3.48□□□□□ -1.85
SMG1-201ENST00000330588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
SMG1-201ENST00000330588 PRO1854Q9UHT4 67 aa3.48□□□□□ -1.85
SMG1-201ENST00000330588 F8WEM9 126 aa3.47□□□□□ -1.85
SMG1-201ENST00000330588 DEFB105AQ8NG35 78 aa3.47□□□□□ -1.85
SMG1-201ENST00000330588 KRTAP10-5P60370 271 aa3.46□□□□□ -1.85
SMG1-201ENST00000330588 LPAP08519 4548 aa3.46□□□□□ -1.86
SMG1-201ENST00000330588 Q6ZQY7 126 aa3.46□□□□□ -1.86
SMG1-201ENST00000330588 hDV103S1A0JD37 113 aa3.45□□□□□ -1.86
SMG1-201ENST00000330588 H0YGX0 51 aa3.45□□□□□ -1.86
SMG1-201ENST00000330588 TRAV22A0A0B4J277 110 aa3.44□□□□□ -1.86
SMG1-201ENST00000330588 CFC1BP0CG36 223 aa3.44□□□□□ -1.86
SMG1-201ENST00000330588 CFC1P0CG37 223 aa3.44□□□□□ -1.86
SMG1-201ENST00000330588 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
SMG1-201ENST00000330588 HCG22E2RYF7 251 aa3.43□□□□□ -1.86
SMG1-201ENST00000330588 COX6CP09669 75 aa3.43□□□□□ -1.86
SMG1-201ENST00000330588 H3BQ85 93 aa3.42□□□□□ -1.86
SMG1-201ENST00000330588 Q5VV11 94 aa3.42□□□□□ -1.86
SMG1-201ENST00000330588 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
SMG1-201ENST00000330588 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
SMG1-201ENST00000330588 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
SMG1-201ENST00000330588 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms