RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 Q6ZRN7 208 aaPredicted RBP12.02□□□□□ -0.49
SPNS2-201ENST00000329078 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
SPNS2-201ENST00000329078 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
SPNS2-201ENST00000329078 MMP24-AS1A0A0U1RRL7 71 aa11.97□□□□□ -0.49
SPNS2-201ENST00000329078 SPRR1BP22528 89 aa11.96□□□□□ -0.49
SPNS2-201ENST00000329078 PRR26Q8N8Z3 221 aa11.96□□□□□ -0.49
SPNS2-201ENST00000329078 SPANXA2-OT1Q8N9U9 137 aa11.95□□□□□ -0.5
SPNS2-201ENST00000329078 A0A087X002 238 aa11.95□□□□□ -0.5
SPNS2-201ENST00000329078 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
SPNS2-201ENST00000329078 NOTCH2NLQ7Z3S9 236 aa11.95□□□□□ -0.5
SPNS2-201ENST00000329078 LINC01554Q52M75 96 aa11.94□□□□□ -0.5
SPNS2-201ENST00000329078 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
SPNS2-201ENST00000329078 FLG2Q5D862 2391 aaPredicted RBP11.91□□□□□ -0.5
SPNS2-201ENST00000329078 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
SPNS2-201ENST00000329078 ZNF861PO60384 105 aa11.9□□□□□ -0.5
SPNS2-201ENST00000329078 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
SPNS2-201ENST00000329078 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
SPNS2-201ENST00000329078 KRTAP13-1Q8IUC0 172 aa11.89□□□□□ -0.51
SPNS2-201ENST00000329078 WWC2-AS2Q96NR7 200 aa11.88□□□□□ -0.51
SPNS2-201ENST00000329078 KMT2AQ03164 3969 aa11.87□□□□□ -0.51
SPNS2-201ENST00000329078 H3BPC8 53 aa11.87□□□□□ -0.51
SPNS2-201ENST00000329078 FRAS1Q86XX4 4008 aa11.85□□□□□ -0.51
SPNS2-201ENST00000329078 PRKDCP78527 4128 aaKnown RBP11.85□□□□□ -0.51
SPNS2-201ENST00000329078 A0A1B0GVX0 72 aa11.85□□□□□ -0.51
SPNS2-201ENST00000329078 HRES1P13985 223 aa11.84□□□□□ -0.51
SPNS2-201ENST00000329078 Q96NJ1 140 aa11.82□□□□□ -0.52
SPNS2-201ENST00000329078 MRPL34Q9BQ48 92 aaKnown RBP11.8□□□□□ -0.52
SPNS2-201ENST00000329078 IGLV7-43P04211 117 aa11.77□□□□□ -0.53
SPNS2-201ENST00000329078 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
SPNS2-201ENST00000329078 LINC01558Q9Y6Z2 57 aa11.77□□□□□ -0.53
SPNS2-201ENST00000329078 CSAG1Q6PB30 78 aa11.75□□□□□ -0.53
SPNS2-201ENST00000329078 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
SPNS2-201ENST00000329078 TP53AIP1Q9HCN2 124 aa11.72□□□□□ -0.53
SPNS2-201ENST00000329078 Q6ZR54 194 aa11.7□□□□□ -0.54
SPNS2-201ENST00000329078 Q5W150 140 aa11.7□□□□□ -0.54
SPNS2-201ENST00000329078 LINC00483Q53H64 154 aa11.69□□□□□ -0.54
SPNS2-201ENST00000329078 DNHD1Q96M86 4753 aa11.69□□□□□ -0.54
SPNS2-201ENST00000329078 A0A1B0GU69 56 aa11.67□□□□□ -0.54
SPNS2-201ENST00000329078 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
SPNS2-201ENST00000329078 DNAH8Q96JB1 4490 aa11.61□□□□□ -0.55
SPNS2-201ENST00000329078 IGKV2D-30A0A075B6S6 120 aa11.6□□□□□ -0.55
SPNS2-201ENST00000329078 IGKV2-30P06310 120 aa11.6□□□□□ -0.55
SPNS2-201ENST00000329078 VPS13DQ5THJ4 4388 aa11.59□□□□□ -0.55
SPNS2-201ENST00000329078 DNAH2Q9P225 4427 aa11.58□□□□□ -0.56
SPNS2-201ENST00000329078 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
SPNS2-201ENST00000329078 HECTD4Q9Y4D8 3996 aa11.57□□□□□ -0.56
SPNS2-201ENST00000329078 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
SPNS2-201ENST00000329078 DNAH17Q9UFH2 4485 aa11.56□□□□□ -0.56
SPNS2-201ENST00000329078 SPINK1P00995 79 aa11.56□□□□□ -0.56
SPNS2-201ENST00000329078 DNAH6Q9C0G6 4158 aa11.55□□□□□ -0.56
SPNS2-201ENST00000329078 MIR22HGQ0VDD5 57 aa11.54□□□□□ -0.56
SPNS2-201ENST00000329078 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.57
SPNS2-201ENST00000329078 ACYP2P14621 99 aa11.51□□□□□ -0.57
SPNS2-201ENST00000329078 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
SPNS2-201ENST00000329078 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
SPNS2-201ENST00000329078 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
SPNS2-201ENST00000329078 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
SPNS2-201ENST00000329078 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
SPNS2-201ENST00000329078 UQCR11O14957 56 aa11.43□□□□□ -0.58
SPNS2-201ENST00000329078 TYMSOSQ8TAI1 123 aa11.42□□□□□ -0.58
SPNS2-201ENST00000329078 DYNC2H1Q8NCM8 4307 aaKnown RBP11.42□□□□□ -0.58
SPNS2-201ENST00000329078 LRP1BQ9NZR2 4599 aa11.37□□□□□ -0.59
SPNS2-201ENST00000329078 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
SPNS2-201ENST00000329078 C9orf92A6NGG3 77 aa11.32□□□□□ -0.6
SPNS2-201ENST00000329078 Q8N1X5 172 aa11.3□□□□□ -0.6
SPNS2-201ENST00000329078 HYDINQ4G0P3 5121 aa11.28□□□□□ -0.6
SPNS2-201ENST00000329078 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
SPNS2-201ENST00000329078 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
SPNS2-201ENST00000329078 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.62
SPNS2-201ENST00000329078 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.62
SPNS2-201ENST00000329078 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.62
SPNS2-201ENST00000329078 ALMS1Q8TCU4 4167 aa11.18□□□□□ -0.62
SPNS2-201ENST00000329078 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
SPNS2-201ENST00000329078 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
SPNS2-201ENST00000329078 Q6ZSA8 131 aa11.14□□□□□ -0.63
SPNS2-201ENST00000329078 ROMO1P60602 79 aa11.11□□□□□ -0.63
SPNS2-201ENST00000329078 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
SPNS2-201ENST00000329078 KRTAP16-1A8MUX0 517 aa11.07□□□□□ -0.64
SPNS2-201ENST00000329078 SPINT4Q6UDR6 99 aa11.06□□□□□ -0.64
SPNS2-201ENST00000329078 FAT1Q14517 4588 aa11.06□□□□□ -0.64
SPNS2-201ENST00000329078 FAT2Q9NYQ8 4349 aa11.02□□□□□ -0.65
SPNS2-201ENST00000329078 KRTAP25-1Q3LHN0 102 aa10.96□□□□□ -0.65
SPNS2-201ENST00000329078 A8MUU9 505 aa10.9□□□□□ -0.66
SPNS2-201ENST00000329078 PKD1P98161 4303 aa10.89□□□□□ -0.67
SPNS2-201ENST00000329078 K7ERS5 55 aa10.84□□□□□ -0.67
SPNS2-201ENST00000329078 NDUFAF8A1L188 74 aa10.83□□□□□ -0.68
SPNS2-201ENST00000329078 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
SPNS2-201ENST00000329078 H0YAA0 97 aa10.79□□□□□ -0.68
SPNS2-201ENST00000329078 P0C880 135 aa10.78□□□□□ -0.68
SPNS2-201ENST00000329078 A0A1B0GU33 70 aa10.75□□□□□ -0.69
SPNS2-201ENST00000329078 SACSQ9NZJ4 4579 aa10.72□□□□□ -0.69
SPNS2-201ENST00000329078 A0A0D9SG42 100 aa10.69□□□□□ -0.7
SPNS2-201ENST00000329078 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
SPNS2-201ENST00000329078 A0A0A0MQY5 61 aa10.67□□□□□ -0.7
SPNS2-201ENST00000329078 LRP1Q07954 4544 aaKnown RBP10.62□□□□□ -0.71
SPNS2-201ENST00000329078 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
SPNS2-201ENST00000329078 KMT2CQ8NEZ4 4911 aaKnown RBP10.57□□□□□ -0.72
SPNS2-201ENST00000329078 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
SPNS2-201ENST00000329078 C10orf95Q9H7T3 257 aa10.56□□□□□ -0.72
SPNS2-201ENST00000329078 H1FX-AS1Q4G0G2 97 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms