RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
ABCF1-201ENST00000326195 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
ABCF1-201ENST00000326195 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
ABCF1-201ENST00000326195 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
ABCF1-201ENST00000326195 SPINK7P58062 85 aa6.36□□□□□ -1.39
ABCF1-201ENST00000326195 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
ABCF1-201ENST00000326195 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
ABCF1-201ENST00000326195 CDK2AP2O75956 126 aa6.36□□□□□ -1.39
ABCF1-201ENST00000326195 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
ABCF1-201ENST00000326195 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
ABCF1-201ENST00000326195 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
ABCF1-201ENST00000326195 CNBPP62633 177 aaKnown RBP6.33□□□□□ -1.4
ABCF1-201ENST00000326195 PCOTHQ58A44 107 aa6.33□□□□□ -1.4
ABCF1-201ENST00000326195 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
ABCF1-201ENST00000326195 EPPK1P58107 5090 aaKnown RBP6.32□□□□□ -1.4
ABCF1-201ENST00000326195 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
ABCF1-201ENST00000326195 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
ABCF1-201ENST00000326195 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
ABCF1-201ENST00000326195 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
ABCF1-201ENST00000326195 DNAH5Q8TE73 4624 aa6.3□□□□□ -1.4
ABCF1-201ENST00000326195 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
ABCF1-201ENST00000326195 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
ABCF1-201ENST00000326195 FAT1Q14517 4588 aa6.29□□□□□ -1.4
ABCF1-201ENST00000326195 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
ABCF1-201ENST00000326195 LINC00313P59037 77 aa6.29□□□□□ -1.4
ABCF1-201ENST00000326195 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
ABCF1-201ENST00000326195 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
ABCF1-201ENST00000326195 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
ABCF1-201ENST00000326195 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
ABCF1-201ENST00000326195 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
ABCF1-201ENST00000326195 HECTD4Q9Y4D8 3996 aa6.27□□□□□ -1.41
ABCF1-201ENST00000326195 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-201ENST00000326195 H3BPC8 53 aa6.26□□□□□ -1.41
ABCF1-201ENST00000326195 ANAPC11Q9NYG5 84 aa6.24□□□□□ -1.41
ABCF1-201ENST00000326195 H3BS24 57 aa6.24□□□□□ -1.41
ABCF1-201ENST00000326195 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
ABCF1-201ENST00000326195 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-201ENST00000326195 HRES1P13985 223 aa6.23□□□□□ -1.41
ABCF1-201ENST00000326195 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
ABCF1-201ENST00000326195 A8MWP4 228 aa6.22□□□□□ -1.41
ABCF1-201ENST00000326195 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
ABCF1-201ENST00000326195 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
ABCF1-201ENST00000326195 MMP24-AS1A0A0U1RRL7 71 aa6.21□□□□□ -1.42
ABCF1-201ENST00000326195 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
ABCF1-201ENST00000326195 PKD1P98161 4303 aa6.21□□□□□ -1.42
ABCF1-201ENST00000326195 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
ABCF1-201ENST00000326195 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
ABCF1-201ENST00000326195 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
ABCF1-201ENST00000326195 SPRR1BP22528 89 aa6.16□□□□□ -1.42
ABCF1-201ENST00000326195 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
ABCF1-201ENST00000326195 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
ABCF1-201ENST00000326195 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
ABCF1-201ENST00000326195 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
ABCF1-201ENST00000326195 ZNF861PO60384 105 aa6.11□□□□□ -1.43
ABCF1-201ENST00000326195 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
ABCF1-201ENST00000326195 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
ABCF1-201ENST00000326195 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
ABCF1-201ENST00000326195 Q5VSD8 79 aa6.1□□□□□ -1.43
ABCF1-201ENST00000326195 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
ABCF1-201ENST00000326195 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
ABCF1-201ENST00000326195 Q96NJ1 140 aa6.09□□□□□ -1.43
ABCF1-201ENST00000326195 A0A087X002 238 aa6.09□□□□□ -1.43
ABCF1-201ENST00000326195 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
ABCF1-201ENST00000326195 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
ABCF1-201ENST00000326195 Q6ZSA8 131 aa6.08□□□□□ -1.44
ABCF1-201ENST00000326195 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
ABCF1-201ENST00000326195 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
ABCF1-201ENST00000326195 IGLV7-43P04211 117 aa6.07□□□□□ -1.44
ABCF1-201ENST00000326195 MRPL34Q9BQ48 92 aaKnown RBP6.07□□□□□ -1.44
ABCF1-201ENST00000326195 MYCBP2O75592 4640 aa6.07□□□□□ -1.44
ABCF1-201ENST00000326195 RYR1P21817 5038 aa6.06□□□□□ -1.44
ABCF1-201ENST00000326195 Q5W150 140 aa6.04□□□□□ -1.44
ABCF1-201ENST00000326195 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
ABCF1-201ENST00000326195 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
ABCF1-201ENST00000326195 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
ABCF1-201ENST00000326195 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
ABCF1-201ENST00000326195 HSPG2P98160 4391 aa6.03□□□□□ -1.44
ABCF1-201ENST00000326195 LINC00483Q53H64 154 aa6□□□□□ -1.45
ABCF1-201ENST00000326195 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
ABCF1-201ENST00000326195 SSBP3-AS1Q7Z2R9 100 aa5.98□□□□□ -1.45
ABCF1-201ENST00000326195 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
ABCF1-201ENST00000326195 A0A1B0GU69 56 aa5.97□□□□□ -1.45
ABCF1-201ENST00000326195 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
ABCF1-201ENST00000326195 HERC2O95714 4834 aa5.95□□□□□ -1.46
ABCF1-201ENST00000326195 ACYP2P14621 99 aa5.95□□□□□ -1.46
ABCF1-201ENST00000326195 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
ABCF1-201ENST00000326195 Q8N1X5 172 aa5.95□□□□□ -1.46
ABCF1-201ENST00000326195 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
ABCF1-201ENST00000326195 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
ABCF1-201ENST00000326195 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
ABCF1-201ENST00000326195 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
ABCF1-201ENST00000326195 J3QL48 77 aa5.9□□□□□ -1.46
ABCF1-201ENST00000326195 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
ABCF1-201ENST00000326195 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.47
ABCF1-201ENST00000326195 UQCR11O14957 56 aa5.89□□□□□ -1.47
ABCF1-201ENST00000326195 KRTAP13-2Q52LG2 175 aa5.87□□□□□ -1.47
ABCF1-201ENST00000326195 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
ABCF1-201ENST00000326195 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
ABCF1-201ENST00000326195 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
ABCF1-201ENST00000326195 SPINK1P00995 79 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms