RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.4
LIMS2-201ENST00000324938 SPANXA2-OT1Q8N9U9 137 aa12.54□□□□□ -0.4
LIMS2-201ENST00000324938 MRPL34Q9BQ48 92 aaKnown RBP12.53□□□□□ -0.4
LIMS2-201ENST00000324938 PRR4Q16378 134 aa12.53□□□□□ -0.4
LIMS2-201ENST00000324938 A0A087X002 238 aa12.52□□□□□ -0.41
LIMS2-201ENST00000324938 NOTCH2NLQ7Z3S9 236 aa12.52□□□□□ -0.41
LIMS2-201ENST00000324938 SPINK6Q6UWN8 80 aa12.51□□□□□ -0.41
LIMS2-201ENST00000324938 LRP1BQ9NZR2 4599 aa12.48□□□□□ -0.41
LIMS2-201ENST00000324938 NDUFS5O43920 106 aa12.48□□□□□ -0.41
LIMS2-201ENST00000324938 KRTAP13-2Q52LG2 175 aa12.48□□□□□ -0.41
LIMS2-201ENST00000324938 MPLKIPQ8TAP9 179 aa12.44□□□□□ -0.42
LIMS2-201ENST00000324938 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
LIMS2-201ENST00000324938 C8orf87E5RJ46 101 aa12.4□□□□□ -0.43
LIMS2-201ENST00000324938 IGLV7-46A0A075B6I9 117 aa12.37□□□□□ -0.43
LIMS2-201ENST00000324938 VPS13BQ7Z7G8 4022 aa12.36□□□□□ -0.43
LIMS2-201ENST00000324938 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
LIMS2-201ENST00000324938 Q1T7F1 81 aa12.34□□□□□ -0.43
LIMS2-201ENST00000324938 C1orf195Q5TG92 126 aa12.34□□□□□ -0.43
LIMS2-201ENST00000324938 SACSQ9NZJ4 4579 aa12.31□□□□□ -0.44
LIMS2-201ENST00000324938 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
LIMS2-201ENST00000324938 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
LIMS2-201ENST00000324938 LIMD2Q9BT23 127 aa12.29□□□□□ -0.44
LIMS2-201ENST00000324938 LINC00313P59037 77 aa12.28□□□□□ -0.44
LIMS2-201ENST00000324938 Q5W150 140 aa12.28□□□□□ -0.44
LIMS2-201ENST00000324938 LOC101927531A0A1B0GV80 90 aa12.27□□□□□ -0.45
LIMS2-201ENST00000324938 PLA2G1BP04054 148 aaKnown RBP12.26□□□□□ -0.45
LIMS2-201ENST00000324938 PKHD1P08F94 4074 aa12.26□□□□□ -0.45
LIMS2-201ENST00000324938 Q8N9P0 234 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-201ENST00000324938 TYMSOSQ8TAI1 123 aa12.22□□□□□ -0.45
LIMS2-201ENST00000324938 COA5Q86WW8 74 aa12.22□□□□□ -0.45
LIMS2-201ENST00000324938 V9GYY9 64 aa12.2□□□□□ -0.46
LIMS2-201ENST00000324938 C4orf48Q5BLP8 95 aa12.19□□□□□ -0.46
LIMS2-201ENST00000324938 KRTAP16-1A8MUX0 517 aa12.17□□□□□ -0.46
LIMS2-201ENST00000324938 SPINK1P00995 79 aa12.17□□□□□ -0.46
LIMS2-201ENST00000324938 PRO0628Q9UI54 55 aa12.16□□□□□ -0.46
LIMS2-201ENST00000324938 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
LIMS2-201ENST00000324938 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
LIMS2-201ENST00000324938 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
LIMS2-201ENST00000324938 PSPHP1O15172 72 aa12.11□□□□□ -0.47
LIMS2-201ENST00000324938 BRK1Q8WUW1 75 aa12.11□□□□□ -0.47
LIMS2-201ENST00000324938 PRR26Q8N8Z3 221 aa12.08□□□□□ -0.47
LIMS2-201ENST00000324938 HRES1P13985 223 aa12.08□□□□□ -0.48
LIMS2-201ENST00000324938 RPS29P62273 56 aaKnown RBP12.08□□□□□ -0.48
LIMS2-201ENST00000324938 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
LIMS2-201ENST00000324938 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
LIMS2-201ENST00000324938 A8MUN3 132 aa12.06□□□□□ -0.48
LIMS2-201ENST00000324938 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
LIMS2-201ENST00000324938 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
LIMS2-201ENST00000324938 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
LIMS2-201ENST00000324938 Q5VV11 94 aa12.01□□□□□ -0.49
LIMS2-201ENST00000324938 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
LIMS2-201ENST00000324938 KRTAP10-4P60372 401 aaPredicted RBP12□□□□□ -0.49
LIMS2-201ENST00000324938 PRR15LQ9BU68 103 aa11.96□□□□□ -0.49
LIMS2-201ENST00000324938 RYR2Q92736 4967 aa11.95□□□□□ -0.5
LIMS2-201ENST00000324938 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
LIMS2-201ENST00000324938 ACYP2P14621 99 aa11.93□□□□□ -0.5
LIMS2-201ENST00000324938 LINC01558Q9Y6Z2 57 aa11.92□□□□□ -0.5
LIMS2-201ENST00000324938 PKHD1L1Q86WI1 4243 aa11.91□□□□□ -0.5
LIMS2-201ENST00000324938 FAT1Q14517 4588 aa11.89□□□□□ -0.51
LIMS2-201ENST00000324938 Q75L30 129 aa11.88□□□□□ -0.51
LIMS2-201ENST00000324938 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
LIMS2-201ENST00000324938 CHKB-CPT1BH3BT56 60 aa11.86□□□□□ -0.51
LIMS2-201ENST00000324938 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.52
LIMS2-201ENST00000324938 C7orf65Q6ZTY9 151 aa11.74□□□□□ -0.53
LIMS2-201ENST00000324938 C20orf166-AS1Q96NR2 134 aa11.72□□□□□ -0.53
LIMS2-201ENST00000324938 A6NED7 52 aa11.71□□□□□ -0.53
LIMS2-201ENST00000324938 A8MUU9 505 aa11.71□□□□□ -0.54
LIMS2-201ENST00000324938 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
LIMS2-201ENST00000324938 A8MU10 97 aa11.69□□□□□ -0.54
LIMS2-201ENST00000324938 LCA10Q71F78 164 aa11.64□□□□□ -0.55
LIMS2-201ENST00000324938 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
LIMS2-201ENST00000324938 CDC42SE1Q9NRR8 79 aa11.6□□□□□ -0.55
LIMS2-201ENST00000324938 SPINK7P58062 85 aa11.59□□□□□ -0.55
LIMS2-201ENST00000324938 Q5VSD8 79 aa11.55□□□□□ -0.56
LIMS2-201ENST00000324938 Q8N1X5 172 aa11.55□□□□□ -0.56
LIMS2-201ENST00000324938 KRTAP10-8P60410 259 aa11.53□□□□□ -0.56
LIMS2-201ENST00000324938 HSPG2P98160 4391 aa11.53□□□□□ -0.56
LIMS2-201ENST00000324938 TNXBP22105 4242 aa11.52□□□□□ -0.57
LIMS2-201ENST00000324938 A0A1B0GU69 56 aa11.51□□□□□ -0.57
LIMS2-201ENST00000324938 ATP11AUNQ6ZP68 121 aa11.51□□□□□ -0.57
LIMS2-201ENST00000324938 SPTSSBQ8NFR3 76 aa11.46□□□□□ -0.57
LIMS2-201ENST00000324938 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.58
LIMS2-201ENST00000324938 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.58
LIMS2-201ENST00000324938 PMAIP1Q13794 54 aa11.44□□□□□ -0.58
LIMS2-201ENST00000324938 RYR3Q15413 4870 aa11.42□□□□□ -0.58
LIMS2-201ENST00000324938 RYR1P21817 5038 aa11.4□□□□□ -0.58
LIMS2-201ENST00000324938 KRTAP3-1Q9BYR8 98 aa11.37□□□□□ -0.59
LIMS2-201ENST00000324938 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
LIMS2-201ENST00000324938 A6NN06 94 aa11.31□□□□□ -0.6
LIMS2-201ENST00000324938 UQCR11O14957 56 aa11.28□□□□□ -0.6
LIMS2-201ENST00000324938 SPATA8Q6RVD6 105 aa11.28□□□□□ -0.6
LIMS2-201ENST00000324938 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
LIMS2-201ENST00000324938 COX6B2Q6YFQ2 88 aa11.26□□□□□ -0.61
LIMS2-201ENST00000324938 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
LIMS2-201ENST00000324938 SEC61GP60059 68 aa11.23□□□□□ -0.61
LIMS2-201ENST00000324938 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
LIMS2-201ENST00000324938 MIR22HGQ0VDD5 57 aa11.22□□□□□ -0.61
LIMS2-201ENST00000324938 XP32Q5T750 250 aa11.21□□□□□ -0.61
LIMS2-201ENST00000324938 KIAA1109Q2LD37 5005 aa11.19□□□□□ -0.62
LIMS2-201ENST00000324938 KTN1-AS1Q86SY8 53 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms