RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 FREM2Q5SZK8 3169 aa5.63□□□□□ -1.51
SNRNP200-201ENST00000323853 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
SNRNP200-201ENST00000323853 KRTAP13-3Q3SY46 172 aa5.62□□□□□ -1.51
SNRNP200-201ENST00000323853 ATMQ13315 3056 aa5.6□□□□□ -1.51
SNRNP200-201ENST00000323853 EYSQ5T1H1 3165 aa5.59□□□□□ -1.51
SNRNP200-201ENST00000323853 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
SNRNP200-201ENST00000323853 BOD1L1Q8NFC6 3051 aa5.58□□□□□ -1.52
SNRNP200-201ENST00000323853 ITPR1Q14643 2758 aa5.57□□□□□ -1.52
SNRNP200-201ENST00000323853 ADGRG4Q8IZF6 3080 aa5.57□□□□□ -1.52
SNRNP200-201ENST00000323853 COL6A5A8TX70 2615 aa5.57□□□□□ -1.52
SNRNP200-201ENST00000323853 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
SNRNP200-201ENST00000323853 P0C880 135 aa5.56□□□□□ -1.52
SNRNP200-201ENST00000323853 BAHCC1Q9P281 2608 aa5.55□□□□□ -1.52
SNRNP200-201ENST00000323853 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
SNRNP200-201ENST00000323853 FRYLO94915 3013 aa5.55□□□□□ -1.52
SNRNP200-201ENST00000323853 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
SNRNP200-201ENST00000323853 MAP1AP78559 2803 aaPredicted RBP5.54□□□□□ -1.52
SNRNP200-201ENST00000323853 NSD1Q96L73 2696 aaPredicted RBP5.53□□□□□ -1.52
SNRNP200-201ENST00000323853 REV3LO60673 3130 aa5.53□□□□□ -1.52
SNRNP200-201ENST00000323853 NBEAQ8NFP9 2946 aa5.52□□□□□ -1.53
SNRNP200-201ENST00000323853 DMXL2Q8TDJ6 3036 aa5.51□□□□□ -1.53
SNRNP200-201ENST00000323853 NOTCH1P46531 2555 aa5.51□□□□□ -1.53
SNRNP200-201ENST00000323853 APCP25054 2843 aa5.51□□□□□ -1.53
SNRNP200-201ENST00000323853 COL12A1Q99715 3063 aa5.49□□□□□ -1.53
SNRNP200-201ENST00000323853 UBR5O95071 2799 aaPredicted RBP5.48□□□□□ -1.53
SNRNP200-201ENST00000323853 STAB1Q9NY15 2570 aa5.47□□□□□ -1.53
SNRNP200-201ENST00000323853 KRTAP10-10P60014 251 aa5.46□□□□□ -1.53
SNRNP200-201ENST00000323853 SPEGQ15772 3267 aa5.45□□□□□ -1.54
SNRNP200-201ENST00000323853 CFAP47Q6ZTR5 3102 aa5.45□□□□□ -1.54
SNRNP200-201ENST00000323853 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
SNRNP200-201ENST00000323853 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
SNRNP200-201ENST00000323853 STAB2Q8WWQ8 2551 aa5.41□□□□□ -1.54
SNRNP200-201ENST00000323853 MYO15AQ9UKN7 3530 aa5.4□□□□□ -1.54
SNRNP200-201ENST00000323853 FLNCQ14315 2725 aa5.4□□□□□ -1.54
SNRNP200-201ENST00000323853 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.55
SNRNP200-201ENST00000323853 DMXL1Q9Y485 3027 aa5.39□□□□□ -1.55
SNRNP200-201ENST00000323853 TACC2O95359 2948 aa5.38□□□□□ -1.55
SNRNP200-201ENST00000323853 ANK3Q12955 4377 aaKnown RBP5.36□□□□□ -1.55
SNRNP200-201ENST00000323853 ASPMQ8IZT6 3477 aa5.35□□□□□ -1.55
SNRNP200-201ENST00000323853 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
SNRNP200-201ENST00000323853 WDFY3Q8IZQ1 3526 aa5.32□□□□□ -1.56
SNRNP200-201ENST00000323853 LOC400499M0QZD8 3231 aa5.31□□□□□ -1.56
SNRNP200-201ENST00000323853 ASH1LQ9NR48 2969 aaKnown RBP5.3□□□□□ -1.56
SNRNP200-201ENST00000323853 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
SNRNP200-201ENST00000323853 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
SNRNP200-201ENST00000323853 CRYBG3Q68DQ2 2970 aa5.29□□□□□ -1.56
SNRNP200-201ENST00000323853 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.573e-6■■□□□ 13.5
SNRNP200-201ENST00000323853 DCHS1Q96JQ0 3298 aa5.25□□□□□ -1.57
SNRNP200-201ENST00000323853 ZFHX4Q86UP3 3567 aa5.25□□□□□ -1.57
SNRNP200-201ENST00000323853 FBN2P35556 2912 aa5.24□□□□□ -1.57
SNRNP200-201ENST00000323853 ZANQ9Y493 2812 aa5.22□□□□□ -1.57
SNRNP200-201ENST00000323853 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
SNRNP200-201ENST00000323853 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
SNRNP200-201ENST00000323853 DCHS2Q6V1P9 2916 aa5.19□□□□□ -1.58
SNRNP200-201ENST00000323853 RELNP78509 3460 aa5.18□□□□□ -1.58
SNRNP200-201ENST00000323853 CSMD1Q96PZ7 3565 aa5.18□□□□□ -1.58
SNRNP200-201ENST00000323853 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SNRNP200-201ENST00000323853 PDZD2O15018 2839 aa5.14□□□□□ -1.59
SNRNP200-201ENST00000323853 NBPF19A0A087WUL8 3843 aa5.14□□□□□ -1.59
SNRNP200-201ENST00000323853 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
SNRNP200-201ENST00000323853 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
SNRNP200-201ENST00000323853 HUWE1Q7Z6Z7 4374 aaKnown RBP5.11□□□□□ -1.59
SNRNP200-201ENST00000323853 DMDP11532 3685 aa5.11□□□□□ -1.59
SNRNP200-201ENST00000323853 ALMS1Q8TCU4 4167 aa5.1□□□□□ -1.59
SNRNP200-201ENST00000323853 TGP01266 2768 aa5.08□□□□□ -1.6
SNRNP200-201ENST00000323853 LAMA5O15230 3695 aa5.07□□□□□ -1.6
SNRNP200-201ENST00000323853 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
SNRNP200-201ENST00000323853 NF1P21359 2839 aa5.05□□□□□ -1.6
SNRNP200-201ENST00000323853 BSNQ9UPA5 3926 aa5.04□□□□□ -1.6
SNRNP200-201ENST00000323853 MXRA5Q9NR99 2828 aa5.03□□□□□ -1.6
SNRNP200-201ENST00000323853 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
SNRNP200-201ENST00000323853 TENM3Q9P273 2699 aa5.01□□□□□ -1.61
SNRNP200-201ENST00000323853 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
SNRNP200-201ENST00000323853 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
SNRNP200-201ENST00000323853 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
SNRNP200-201ENST00000323853 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
SNRNP200-201ENST00000323853 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
SNRNP200-201ENST00000323853 SPENQ96T58 3664 aaKnown RBP4.93□□□□□ -1.62
SNRNP200-201ENST00000323853 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
SNRNP200-201ENST00000323853 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
SNRNP200-201ENST00000323853 OTOGQ6ZRI0 2925 aa4.88□□□□□ -1.63
SNRNP200-201ENST00000323853 FBN1P35555 2871 aaKnown RBP4.83□□□□□ -1.64
SNRNP200-201ENST00000323853 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
SNRNP200-201ENST00000323853 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
SNRNP200-201ENST00000323853 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
SNRNP200-201ENST00000323853 VPS13CQ709C8 3753 aa4.78□□□□□ -1.64
SNRNP200-201ENST00000323853 INE1O15225 51 aa4.78□□□□□ -1.64
SNRNP200-201ENST00000323853 DNAH9Q9NYC9 4486 aa4.77□□□□□ -1.65
SNRNP200-201ENST00000323853 VWFP04275 2813 aa4.75□□□□□ -1.65
SNRNP200-201ENST00000323853 CSMD2Q7Z408 3487 aa4.73□□□□□ -1.65
SNRNP200-201ENST00000323853 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
SNRNP200-201ENST00000323853 CUBNO60494 3623 aa4.7□□□□□ -1.66
SNRNP200-201ENST00000323853 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
SNRNP200-201ENST00000323853 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
SNRNP200-201ENST00000323853 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
SNRNP200-201ENST00000323853 MUC3AQ02505 3323 aa4.69□□□□□ -1.66
SNRNP200-201ENST00000323853 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
SNRNP200-201ENST00000323853 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
SNRNP200-201ENST00000323853 DNAH3Q8TD57 4116 aa4.67□□□□□ -1.66
SNRNP200-201ENST00000323853 ZFHX3Q15911 3703 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms