RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 LINC00336Q6ZUF6 198 aa11.28□□□□□ -0.6
HCCS-201ENST00000321143 IGHV6-1A0A0B4J1U7 121 aa11.26□□□□□ -0.61
HCCS-201ENST00000321143 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
HCCS-201ENST00000321143 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
HCCS-201ENST00000321143 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
HCCS-201ENST00000321143 LRP1BQ9NZR2 4599 aa11.23□□□□□ -0.61
HCCS-201ENST00000321143 CIRBP-AS1Q8TBR5 109 aa11.2□□□□□ -0.62
HCCS-201ENST00000321143 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
HCCS-201ENST00000321143 DYNC1H1Q14204 4646 aaKnown RBP11.19□□□□□ -0.62
HCCS-201ENST00000321143 NDUFS5O43920 106 aa11.18□□□□□ -0.62
HCCS-201ENST00000321143 Q1T7F1 81 aa11.18□□□□□ -0.62
HCCS-201ENST00000321143 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
HCCS-201ENST00000321143 A0A087X002 238 aa11.16□□□□□ -0.62
HCCS-201ENST00000321143 NOTCH2NLQ7Z3S9 236 aa11.16□□□□□ -0.62
HCCS-201ENST00000321143 PRO0628Q9UI54 55 aa11.15□□□□□ -0.62
HCCS-201ENST00000321143 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
HCCS-201ENST00000321143 CD164Q04900 197 aa11.14□□□□□ -0.63
HCCS-201ENST00000321143 SSBP3-AS1Q7Z2R9 100 aa11.14□□□□□ -0.63
HCCS-201ENST00000321143 IGLV7-46A0A075B6I9 117 aa11.11□□□□□ -0.63
HCCS-201ENST00000321143 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
HCCS-201ENST00000321143 BRK1Q8WUW1 75 aa11.1□□□□□ -0.63
HCCS-201ENST00000321143 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
HCCS-201ENST00000321143 Q6ZSA8 131 aa11.07□□□□□ -0.64
HCCS-201ENST00000321143 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
HCCS-201ENST00000321143 V9GYY9 64 aa11.04□□□□□ -0.64
HCCS-201ENST00000321143 APOBP04114 4563 aaKnown RBP11.03□□□□□ -0.64
HCCS-201ENST00000321143 PSPHP1O15172 72 aa11.03□□□□□ -0.64
HCCS-201ENST00000321143 COA5Q86WW8 74 aa11.01□□□□□ -0.65
HCCS-201ENST00000321143 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
HCCS-201ENST00000321143 FAT1Q14517 4588 aa11.01□□□□□ -0.65
HCCS-201ENST00000321143 C8orf87E5RJ46 101 aa11□□□□□ -0.65
HCCS-201ENST00000321143 Q5W150 140 aa10.97□□□□□ -0.65
HCCS-201ENST00000321143 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
HCCS-201ENST00000321143 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.66
HCCS-201ENST00000321143 A8MUN3 132 aa10.96□□□□□ -0.66
HCCS-201ENST00000321143 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
HCCS-201ENST00000321143 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
HCCS-201ENST00000321143 LINC00313P59037 77 aa10.92□□□□□ -0.66
HCCS-201ENST00000321143 LIMD2Q9BT23 127 aa10.92□□□□□ -0.66
HCCS-201ENST00000321143 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
HCCS-201ENST00000321143 KRTAP1-4P0C5Y4 121 aa10.91□□□□□ -0.66
HCCS-201ENST00000321143 Q5VV11 94 aa10.89□□□□□ -0.67
HCCS-201ENST00000321143 SMR3BP02814 79 aaPredicted RBP10.88□□□□□ -0.67
HCCS-201ENST00000321143 HRES1P13985 223 aa10.86□□□□□ -0.67
HCCS-201ENST00000321143 PRR15LQ9BU68 103 aa10.85□□□□□ -0.67
HCCS-201ENST00000321143 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
HCCS-201ENST00000321143 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
HCCS-201ENST00000321143 HSPG2P98160 4391 aa10.79□□□□□ -0.68
HCCS-201ENST00000321143 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
HCCS-201ENST00000321143 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
HCCS-201ENST00000321143 KRTAP16-1A8MUX0 517 aa10.78□□□□□ -0.68
HCCS-201ENST00000321143 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
HCCS-201ENST00000321143 RETNLBQ9BQ08 111 aa10.78□□□□□ -0.68
HCCS-201ENST00000321143 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
HCCS-201ENST00000321143 TYMSOSQ8TAI1 123 aa10.77□□□□□ -0.69
HCCS-201ENST00000321143 LINC01558Q9Y6Z2 57 aa10.75□□□□□ -0.69
HCCS-201ENST00000321143 Q75L30 129 aa10.74□□□□□ -0.69
HCCS-201ENST00000321143 RYR1P21817 5038 aa10.73□□□□□ -0.69
HCCS-201ENST00000321143 SPINK1P00995 79 aa10.72□□□□□ -0.69
HCCS-201ENST00000321143 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
HCCS-201ENST00000321143 ACYP2P14621 99 aa10.71□□□□□ -0.69
HCCS-201ENST00000321143 KRTAP17-1Q9BYP8 105 aa10.69□□□□□ -0.7
HCCS-201ENST00000321143 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
HCCS-201ENST00000321143 A8MU10 97 aa10.67□□□□□ -0.7
HCCS-201ENST00000321143 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
HCCS-201ENST00000321143 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
HCCS-201ENST00000321143 A6NED7 52 aa10.65□□□□□ -0.7
HCCS-201ENST00000321143 LINC00304Q8N9R0 145 aa10.62□□□□□ -0.71
HCCS-201ENST00000321143 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
HCCS-201ENST00000321143 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
HCCS-201ENST00000321143 RPS29P62273 56 aaKnown RBP10.59□□□□□ -0.71
HCCS-201ENST00000321143 LCA10Q71F78 164 aa10.59□□□□□ -0.71
HCCS-201ENST00000321143 FLG2Q5D862 2391 aaPredicted RBP10.55□□□□□ -0.72
HCCS-201ENST00000321143 PKHD1L1Q86WI1 4243 aa10.55□□□□□ -0.72
HCCS-201ENST00000321143 CDC42SE1Q9NRR8 79 aa10.53□□□□□ -0.72
HCCS-201ENST00000321143 SPINK7P58062 85 aa10.5□□□□□ -0.73
HCCS-201ENST00000321143 Q5VSD8 79 aa10.49□□□□□ -0.73
HCCS-201ENST00000321143 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
HCCS-201ENST00000321143 PMAIP1Q13794 54 aa10.48□□□□□ -0.73
HCCS-201ENST00000321143 SPTSSBQ8NFR3 76 aa10.48□□□□□ -0.73
HCCS-201ENST00000321143 ATP11AUNQ6ZP68 121 aa10.47□□□□□ -0.73
HCCS-201ENST00000321143 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.74
HCCS-201ENST00000321143 TNXBP22105 4242 aa10.39□□□□□ -0.75
HCCS-201ENST00000321143 FAT3Q8TDW7 4589 aa10.39□□□□□ -0.75
HCCS-201ENST00000321143 A0A1B0GU69 56 aa10.38□□□□□ -0.75
HCCS-201ENST00000321143 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
HCCS-201ENST00000321143 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
HCCS-201ENST00000321143 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
HCCS-201ENST00000321143 A8MUU9 505 aa10.33□□□□□ -0.76
HCCS-201ENST00000321143 Q8N1X5 172 aa10.32□□□□□ -0.76
HCCS-201ENST00000321143 DMBT1Q9UGM3 2413 aaPredicted RBP10.32□□□□□ -0.76
HCCS-201ENST00000321143 BIRC6Q9NR09 4857 aa10.31□□□□□ -0.76
HCCS-201ENST00000321143 A6NN06 94 aa10.31□□□□□ -0.76
HCCS-201ENST00000321143 ABCA13Q86UQ4 5058 aa10.28□□□□□ -0.76
HCCS-201ENST00000321143 KTN1-AS1Q86SY8 53 aa10.23□□□□□ -0.77
HCCS-201ENST00000321143 HERC2O95714 4834 aa10.19□□□□□ -0.78
HCCS-201ENST00000321143 SPATA8Q6RVD6 105 aa10.19□□□□□ -0.78
HCCS-201ENST00000321143 UQCR11O14957 56 aa10.18□□□□□ -0.78
HCCS-201ENST00000321143 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
HCCS-201ENST00000321143 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms