RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
IFT88-201ENST00000319980 A0A087X002 238 aa4.46□□□□□ -1.7
IFT88-201ENST00000319980 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
IFT88-201ENST00000319980 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
IFT88-201ENST00000319980 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
IFT88-201ENST00000319980 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
IFT88-201ENST00000319980 SSBP3-AS1Q7Z2R9 100 aa4.45□□□□□ -1.7
IFT88-201ENST00000319980 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
IFT88-201ENST00000319980 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
IFT88-201ENST00000319980 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
IFT88-201ENST00000319980 MP68P56378 58 aa4.43□□□□□ -1.7
IFT88-201ENST00000319980 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
IFT88-201ENST00000319980 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
IFT88-201ENST00000319980 C8orf17Q9NRJ1 99 aa4.43□□□□□ -1.7
IFT88-201ENST00000319980 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
IFT88-201ENST00000319980 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
IFT88-201ENST00000319980 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
IFT88-201ENST00000319980 HERC2O95714 4834 aa4.42□□□□□ -1.7
IFT88-201ENST00000319980 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 H0Y9P7 68 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 KRTAP1-4P0C5Y4 121 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 C1orf195Q5TG92 126 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
IFT88-201ENST00000319980 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.7
IFT88-201ENST00000319980 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.7
IFT88-201ENST00000319980 PRO0628Q9UI54 55 aa4.4□□□□□ -1.7
IFT88-201ENST00000319980 NDUFS5O43920 106 aa4.4□□□□□ -1.71
IFT88-201ENST00000319980 SMR3BP02814 79 aaPredicted RBP4.4□□□□□ -1.71
IFT88-201ENST00000319980 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
IFT88-201ENST00000319980 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
IFT88-201ENST00000319980 DYNC1H1Q14204 4646 aaKnown RBP4.4□□□□□ -1.71
IFT88-201ENST00000319980 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
IFT88-201ENST00000319980 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
IFT88-201ENST00000319980 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
IFT88-201ENST00000319980 PRR4Q16378 134 aa4.37□□□□□ -1.71
IFT88-201ENST00000319980 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
IFT88-201ENST00000319980 LCE2BO14633 110 aa4.37□□□□□ -1.71
IFT88-201ENST00000319980 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
IFT88-201ENST00000319980 H3BPC8 53 aa4.36□□□□□ -1.71
IFT88-201ENST00000319980 Q5XG85 94 aa4.35□□□□□ -1.71
IFT88-201ENST00000319980 LINC00313P59037 77 aa4.33□□□□□ -1.72
IFT88-201ENST00000319980 LIMD2Q9BT23 127 aa4.33□□□□□ -1.72
IFT88-201ENST00000319980 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
IFT88-201ENST00000319980 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
IFT88-201ENST00000319980 PCOTHQ58A44 107 aa4.32□□□□□ -1.72
IFT88-201ENST00000319980 SPINK1P00995 79 aa4.32□□□□□ -1.72
IFT88-201ENST00000319980 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
IFT88-201ENST00000319980 Q5W150 140 aa4.31□□□□□ -1.72
IFT88-201ENST00000319980 FAT1Q14517 4588 aa4.31□□□□□ -1.72
IFT88-201ENST00000319980 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
IFT88-201ENST00000319980 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
IFT88-201ENST00000319980 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
IFT88-201ENST00000319980 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
IFT88-201ENST00000319980 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
IFT88-201ENST00000319980 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
IFT88-201ENST00000319980 RYR1P21817 5038 aa4.28□□□□□ -1.72
IFT88-201ENST00000319980 RETNLBQ9BQ08 111 aa4.27□□□□□ -1.73
IFT88-201ENST00000319980 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
IFT88-201ENST00000319980 IGLV7-46A0A075B6I9 117 aa4.27□□□□□ -1.73
IFT88-201ENST00000319980 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
IFT88-201ENST00000319980 APOBP04114 4563 aaKnown RBP4.26□□□□□ -1.73
IFT88-201ENST00000319980 SPAG11AQ6PDA7 123 aa4.26□□□□□ -1.73
IFT88-201ENST00000319980 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
IFT88-201ENST00000319980 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
IFT88-201ENST00000319980 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
IFT88-201ENST00000319980 HSPG2P98160 4391 aa4.25□□□□□ -1.73
IFT88-201ENST00000319980 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
IFT88-201ENST00000319980 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
IFT88-201ENST00000319980 Q8N1X5 172 aa4.23□□□□□ -1.73
IFT88-201ENST00000319980 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
IFT88-201ENST00000319980 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
IFT88-201ENST00000319980 COA5Q86WW8 74 aa4.21□□□□□ -1.74
IFT88-201ENST00000319980 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
IFT88-201ENST00000319980 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 Q1T7F1 81 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 HRES1P13985 223 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 Q5VSD8 79 aa4.19□□□□□ -1.74
IFT88-201ENST00000319980 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
IFT88-201ENST00000319980 PSPHP1O15172 72 aa4.18□□□□□ -1.74
IFT88-201ENST00000319980 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
IFT88-201ENST00000319980 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
IFT88-201ENST00000319980 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
IFT88-201ENST00000319980 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
IFT88-201ENST00000319980 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.75
IFT88-201ENST00000319980 A8MUN3 132 aa4.14□□□□□ -1.75
IFT88-201ENST00000319980 ACYP2P14621 99 aa4.14□□□□□ -1.75
IFT88-201ENST00000319980 DMBT1Q9UGM3 2413 aaPredicted RBP4.14□□□□□ -1.75
IFT88-201ENST00000319980 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
IFT88-201ENST00000319980 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
IFT88-201ENST00000319980 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
IFT88-201ENST00000319980 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
IFT88-201ENST00000319980 A8MUU9 505 aa4.11□□□□□ -1.75
IFT88-201ENST00000319980 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
IFT88-201ENST00000319980 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
IFT88-201ENST00000319980 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
IFT88-201ENST00000319980 Q5VV11 94 aa4.1□□□□□ -1.75
IFT88-201ENST00000319980 TNXBP22105 4242 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms