RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.86
CRAT-201ENST00000318080 H3BPC8 53 aa9.7□□□□□ -0.86
CRAT-201ENST00000318080 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
CRAT-201ENST00000318080 HRES1P13985 223 aa9.68□□□□□ -0.86
CRAT-201ENST00000318080 Q96NJ1 140 aa9.68□□□□□ -0.86
CRAT-201ENST00000318080 A0A087X002 238 aa9.67□□□□□ -0.86
CRAT-201ENST00000318080 IGHV6-1A0A0B4J1U7 121 aa9.67□□□□□ -0.86
CRAT-201ENST00000318080 NOTCH2NLQ7Z3S9 236 aa9.67□□□□□ -0.86
CRAT-201ENST00000318080 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
CRAT-201ENST00000318080 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
CRAT-201ENST00000318080 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
CRAT-201ENST00000318080 ANAPC11Q9NYG5 84 aa9.63□□□□□ -0.87
CRAT-201ENST00000318080 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
CRAT-201ENST00000318080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
CRAT-201ENST00000318080 PLAC8Q9NZF1 115 aa9.6□□□□□ -0.87
CRAT-201ENST00000318080 C8orf17Q9NRJ1 99 aa9.6□□□□□ -0.87
CRAT-201ENST00000318080 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
CRAT-201ENST00000318080 LY6G6CO95867 125 aa9.59□□□□□ -0.87
CRAT-201ENST00000318080 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
CRAT-201ENST00000318080 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
CRAT-201ENST00000318080 SACSQ9NZJ4 4579 aa9.57□□□□□ -0.88
CRAT-201ENST00000318080 DNAH8Q96JB1 4490 aa9.55□□□□□ -0.88
CRAT-201ENST00000318080 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
CRAT-201ENST00000318080 HECTD4Q9Y4D8 3996 aa9.55□□□□□ -0.88
CRAT-201ENST00000318080 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
CRAT-201ENST00000318080 Q5W150 140 aa9.53□□□□□ -0.88
CRAT-201ENST00000318080 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.88
CRAT-201ENST00000318080 KMT2CQ8NEZ4 4911 aaKnown RBP9.52□□□□□ -0.88
CRAT-201ENST00000318080 Q6ZR54 194 aa9.52□□□□□ -0.89
CRAT-201ENST00000318080 RETNLBQ9BQ08 111 aa9.51□□□□□ -0.89
CRAT-201ENST00000318080 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
CRAT-201ENST00000318080 A0A1B0GVX0 72 aa9.5□□□□□ -0.89
CRAT-201ENST00000318080 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
CRAT-201ENST00000318080 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
CRAT-201ENST00000318080 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
CRAT-201ENST00000318080 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
CRAT-201ENST00000318080 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
CRAT-201ENST00000318080 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
CRAT-201ENST00000318080 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
CRAT-201ENST00000318080 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
CRAT-201ENST00000318080 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
CRAT-201ENST00000318080 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
CRAT-201ENST00000318080 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
CRAT-201ENST00000318080 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.91
CRAT-201ENST00000318080 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
CRAT-201ENST00000318080 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
CRAT-201ENST00000318080 RYR2Q92736 4967 aa9.38□□□□□ -0.91
CRAT-201ENST00000318080 A0A087WTM6 91 aa9.38□□□□□ -0.91
CRAT-201ENST00000318080 CSAG1Q6PB30 78 aa9.38□□□□□ -0.91
CRAT-201ENST00000318080 PKD1P98161 4303 aa9.37□□□□□ -0.91
CRAT-201ENST00000318080 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
CRAT-201ENST00000318080 RTL8CO15255 209 aa9.35□□□□□ -0.91
CRAT-201ENST00000318080 ZNF861PO60384 105 aa9.35□□□□□ -0.91
CRAT-201ENST00000318080 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
CRAT-201ENST00000318080 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CRAT-201ENST00000318080 RYR3Q15413 4870 aa9.31□□□□□ -0.92
CRAT-201ENST00000318080 A0A1B0GU69 56 aa9.3□□□□□ -0.92
CRAT-201ENST00000318080 ACYP2P14621 99 aa9.3□□□□□ -0.92
CRAT-201ENST00000318080 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
CRAT-201ENST00000318080 A0A0A0MQY5 61 aa9.29□□□□□ -0.92
CRAT-201ENST00000318080 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
CRAT-201ENST00000318080 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
CRAT-201ENST00000318080 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
CRAT-201ENST00000318080 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CRAT-201ENST00000318080 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
CRAT-201ENST00000318080 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
CRAT-201ENST00000318080 SPINK1P00995 79 aa9.15□□□□□ -0.94
CRAT-201ENST00000318080 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
CRAT-201ENST00000318080 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
CRAT-201ENST00000318080 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
CRAT-201ENST00000318080 FLG2Q5D862 2391 aaPredicted RBP9.11□□□□□ -0.95
CRAT-201ENST00000318080 UQCR11O14957 56 aa9.11□□□□□ -0.95
CRAT-201ENST00000318080 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
CRAT-201ENST00000318080 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
CRAT-201ENST00000318080 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
CRAT-201ENST00000318080 ROMO1P60602 79 aa9.06□□□□□ -0.96
CRAT-201ENST00000318080 VPS13BQ7Z7G8 4022 aa9.05□□□□□ -0.96
CRAT-201ENST00000318080 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
CRAT-201ENST00000318080 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.96
CRAT-201ENST00000318080 Q8N1X5 172 aa9.02□□□□□ -0.96
CRAT-201ENST00000318080 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
CRAT-201ENST00000318080 FAT1Q14517 4588 aa9.02□□□□□ -0.97
CRAT-201ENST00000318080 EPPK1P58107 5090 aaKnown RBP8.99□□□□□ -0.97
CRAT-201ENST00000318080 Q6ZSA8 131 aa8.98□□□□□ -0.97
CRAT-201ENST00000318080 CRIPTQ9P021 101 aa8.95□□□□□ -0.98
CRAT-201ENST00000318080 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
CRAT-201ENST00000318080 P0C880 135 aa8.92□□□□□ -0.98
CRAT-201ENST00000318080 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
CRAT-201ENST00000318080 KRTAP25-1Q3LHN0 102 aa8.91□□□□□ -0.98
CRAT-201ENST00000318080 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
CRAT-201ENST00000318080 HSPG2P98160 4391 aa8.86□□□□□ -0.99
CRAT-201ENST00000318080 H0YAA0 97 aa8.86□□□□□ -0.99
CRAT-201ENST00000318080 TYMSOSQ8TAI1 123 aa8.86□□□□□ -0.99
CRAT-201ENST00000318080 A8MUU9 505 aa8.8□□□□□ -1
CRAT-201ENST00000318080 RYR1P21817 5038 aa8.8□□□□□ -1
CRAT-201ENST00000318080 LINC00304Q8N9R0 145 aa8.79□□□□□ -1
CRAT-201ENST00000318080 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
CRAT-201ENST00000318080 DMBT1Q9UGM3 2413 aaPredicted RBP8.76□□□□□ -1.01
CRAT-201ENST00000318080 KRTAP10-4P60372 401 aaPredicted RBP8.68□□□□□ -1.02
CRAT-201ENST00000318080 LRP1Q07954 4544 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms