RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 FAM168BA1KXE4 195 aa2.39□□□□□ -2.03
GEN1-201ENST00000317402 IGKV2-30P06310 120 aa2.38□□□□□ -2.03
GEN1-201ENST00000317402 LINC00612Q8N6U2 182 aa2.38□□□□□ -2.03
GEN1-201ENST00000317402 Q8N9P0 234 aaPredicted RBP2.38□□□□□ -2.03
GEN1-201ENST00000317402 A6NN06 94 aa2.38□□□□□ -2.03
GEN1-201ENST00000317402 COX6B2Q6YFQ2 88 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 LY6G6CO95867 125 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 Q8NAQ8 132 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 J3QL48 77 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 PLA2G2DQ9UNK4 145 aa2.37□□□□□ -2.03
GEN1-201ENST00000317402 OBSCN-AS1Q96MR7 158 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 K7EQZ3 153 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 SPINK7P58062 85 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 EPM2AB3EWF7 344 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 TLX1NBP0CAT3 122 aa2.36□□□□□ -2.03
GEN1-201ENST00000317402 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 FAT1Q14517 4588 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 ANAPC11Q9NYG5 84 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 KRTAP24-1Q3LI83 254 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 TYMSOSQ8TAI1 123 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 LINC01558Q9Y6Z2 57 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 KMT2AQ03164 3969 aa2.35□□□□□ -2.03
GEN1-201ENST00000317402 C9orf163Q8N9P6 203 aa2.34□□□□□ -2.03
GEN1-201ENST00000317402 HRES1P13985 223 aa2.34□□□□□ -2.04
GEN1-201ENST00000317402 KCNQ1DNQ9H478 68 aa2.34□□□□□ -2.04
GEN1-201ENST00000317402 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
GEN1-201ENST00000317402 PRKDCP78527 4128 aaKnown RBP2.33□□□□□ -2.04
GEN1-201ENST00000317402 C19orf73Q9NVV2 129 aa2.33□□□□□ -2.04
GEN1-201ENST00000317402 FBN3Q75N90 2809 aa2.33□□□□□ -2.04
GEN1-201ENST00000317402 MYCBP2O75592 4640 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 KRTAP7-1Q8IUC3 87 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 RYR3Q15413 4870 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 NBDYA0A0U1RRE5 68 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 PANO1I0J062 215 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
GEN1-201ENST00000317402 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
GEN1-201ENST00000317402 LINC00167Q96N53 147 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 APLNQ9ULZ1 77 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 KRTAP23-1A1A580 65 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 ZNF861PO60384 105 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
GEN1-201ENST00000317402 CNBPP62633 177 aaKnown RBP2.3□□□□□ -2.04
GEN1-201ENST00000317402 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
GEN1-201ENST00000317402 RYR1P21817 5038 aa2.3□□□□□ -2.04
GEN1-201ENST00000317402 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
GEN1-201ENST00000317402 WWC2-AS2Q96NR7 200 aa2.3□□□□□ -2.04
GEN1-201ENST00000317402 PRR34Q9NV39 138 aa2.29□□□□□ -2.04
GEN1-201ENST00000317402 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
GEN1-201ENST00000317402 SPACA4Q8TDM5 124 aa2.29□□□□□ -2.04
GEN1-201ENST00000317402 C15orf56Q8N910 161 aa2.29□□□□□ -2.04
GEN1-201ENST00000317402 RTL8CO15255 209 aa2.28□□□□□ -2.04
GEN1-201ENST00000317402 ROMO1P60602 79 aa2.28□□□□□ -2.04
GEN1-201ENST00000317402 A0A0D9SG42 100 aa2.27□□□□□ -2.05
GEN1-201ENST00000317402 K7EIL1 84 aa2.27□□□□□ -2.05
GEN1-201ENST00000317402 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
GEN1-201ENST00000317402 Q96NJ1 140 aa2.27□□□□□ -2.05
GEN1-201ENST00000317402 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
GEN1-201ENST00000317402 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
GEN1-201ENST00000317402 KRTAP1-5Q9BYS1 174 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 A0A1W2PNM2 257 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 IGLV5-48A0A075B6I7 105 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 Q6ZR54 194 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
GEN1-201ENST00000317402 A0A1B0GU33 70 aa2.24□□□□□ -2.05
GEN1-201ENST00000317402 DSCR10P59022 87 aa2.23□□□□□ -2.05
GEN1-201ENST00000317402 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
GEN1-201ENST00000317402 PKHD1L1Q86WI1 4243 aa2.22□□□□□ -2.05
GEN1-201ENST00000317402 Q8N377 158 aa2.22□□□□□ -2.05
GEN1-201ENST00000317402 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
GEN1-201ENST00000317402 KMT2CQ8NEZ4 4911 aaKnown RBP2.22□□□□□ -2.05
GEN1-201ENST00000317402 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
GEN1-201ENST00000317402 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
GEN1-201ENST00000317402 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.06
GEN1-201ENST00000317402 C20orf166-AS1Q96NR2 134 aa2.2□□□□□ -2.06
GEN1-201ENST00000317402 Q8N1X5 172 aa2.2□□□□□ -2.06
GEN1-201ENST00000317402 KRTAP26-1Q6PEX3 210 aa2.2□□□□□ -2.06
GEN1-201ENST00000317402 ZCCHC13Q8WW36 166 aaKnown RBP2.2□□□□□ -2.06
GEN1-201ENST00000317402 KRTAP17-1Q9BYP8 105 aa2.19□□□□□ -2.06
GEN1-201ENST00000317402 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
GEN1-201ENST00000317402 A0A087WTM6 91 aa2.19□□□□□ -2.06
GEN1-201ENST00000317402 A8MUU9 505 aa2.19□□□□□ -2.06
GEN1-201ENST00000317402 Q6ZSA8 131 aa2.18□□□□□ -2.06
GEN1-201ENST00000317402 MT3P25713 68 aa2.18□□□□□ -2.06
GEN1-201ENST00000317402 SPRR1BP22528 89 aa2.18□□□□□ -2.06
GEN1-201ENST00000317402 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
GEN1-201ENST00000317402 PKHD1P08F94 4074 aa2.17□□□□□ -2.06
GEN1-201ENST00000317402 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
GEN1-201ENST00000317402 PKD1P98161 4303 aa2.17□□□□□ -2.06
GEN1-201ENST00000317402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.17□□□□□ -2.06
GEN1-201ENST00000317402 SPRR1AP35321 89 aa2.17□□□□□ -2.06
GEN1-201ENST00000317402 S4R3F8 94 aa2.17□□□□□ -2.06
GEN1-201ENST00000317402 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms