RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 A0A087X002 238 aa13.75□□□□□ -0.21
APBA3-201ENST00000316757 VPS13BQ7Z7G8 4022 aa13.73□□□□□ -0.21
APBA3-201ENST00000316757 LINC00208Q96KT6 92 aa13.73□□□□□ -0.21
APBA3-201ENST00000316757 KRTAP13-2Q52LG2 175 aa13.72□□□□□ -0.21
APBA3-201ENST00000316757 TRAV22A0A0B4J277 110 aa13.7□□□□□ -0.22
APBA3-201ENST00000316757 TP53AIP1Q9HCN2 124 aa13.7□□□□□ -0.22
APBA3-201ENST00000316757 SPINK6Q6UWN8 80 aa13.69□□□□□ -0.22
APBA3-201ENST00000316757 KRTAP1-4P0C5Y4 121 aa13.67□□□□□ -0.22
APBA3-201ENST00000316757 MRPL34Q9BQ48 92 aaKnown RBP13.65□□□□□ -0.22
APBA3-201ENST00000316757 NOTCH2NLQ7Z3S9 236 aa13.64□□□□□ -0.23
APBA3-201ENST00000316757 APOBP04114 4563 aaKnown RBP13.63□□□□□ -0.23
APBA3-201ENST00000316757 C1orf64Q8NEQ6 169 aa13.63□□□□□ -0.23
APBA3-201ENST00000316757 Q5XG85 94 aa13.62□□□□□ -0.23
APBA3-201ENST00000316757 SMIM26A0A096LP01 95 aa13.61□□□□□ -0.23
APBA3-201ENST00000316757 NDUFS5O43920 106 aa13.6□□□□□ -0.23
APBA3-201ENST00000316757 SMR3BP02814 79 aaPredicted RBP13.59□□□□□ -0.23
APBA3-201ENST00000316757 CYP4F30PQ9H0H9 118 aa13.58□□□□□ -0.24
APBA3-201ENST00000316757 RYR3Q15413 4870 aa13.55□□□□□ -0.24
APBA3-201ENST00000316757 C8orf87E5RJ46 101 aa13.55□□□□□ -0.24
APBA3-201ENST00000316757 PLA2G1BP04054 148 aaKnown RBP13.54□□□□□ -0.24
APBA3-201ENST00000316757 SPANXA2-OT1Q8N9U9 137 aa13.53□□□□□ -0.24
APBA3-201ENST00000316757 C1orf195Q5TG92 126 aa13.52□□□□□ -0.24
APBA3-201ENST00000316757 FP248Q71RG6 208 aaPredicted RBP13.51□□□□□ -0.25
APBA3-201ENST00000316757 LIMD2Q9BT23 127 aa13.51□□□□□ -0.25
APBA3-201ENST00000316757 PRR4Q16378 134 aa13.51□□□□□ -0.25
APBA3-201ENST00000316757 C4orf26Q17RF5 130 aa13.49□□□□□ -0.25
APBA3-201ENST00000316757 TYMSOSQ8TAI1 123 aa13.48□□□□□ -0.25
APBA3-201ENST00000316757 C4orf48Q5BLP8 95 aa13.45□□□□□ -0.26
APBA3-201ENST00000316757 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
APBA3-201ENST00000316757 LINC00313P59037 77 aa13.44□□□□□ -0.26
APBA3-201ENST00000316757 FAT1Q14517 4588 aa13.44□□□□□ -0.26
APBA3-201ENST00000316757 SPINK1P00995 79 aa13.4□□□□□ -0.26
APBA3-201ENST00000316757 PCOTHQ58A44 107 aa13.38□□□□□ -0.27
APBA3-201ENST00000316757 IGLV7-46A0A075B6I9 117 aa13.37□□□□□ -0.27
APBA3-201ENST00000316757 KRTAP13-3Q3SY46 172 aa13.36□□□□□ -0.27
APBA3-201ENST00000316757 Q5W150 140 aa13.36□□□□□ -0.27
APBA3-201ENST00000316757 PRR26Q8N8Z3 221 aa13.35□□□□□ -0.27
APBA3-201ENST00000316757 LOC101927531A0A1B0GV80 90 aa13.33□□□□□ -0.27
APBA3-201ENST00000316757 Q8N9P0 234 aaPredicted RBP13.33□□□□□ -0.27
APBA3-201ENST00000316757 LINC00304Q8N9R0 145 aa13.31□□□□□ -0.28
APBA3-201ENST00000316757 MPLKIPQ8TAP9 179 aa13.31□□□□□ -0.28
APBA3-201ENST00000316757 RPS29P62273 56 aaKnown RBP13.3□□□□□ -0.28
APBA3-201ENST00000316757 KRTAP16-1A8MUX0 517 aa13.28□□□□□ -0.28
APBA3-201ENST00000316757 FAM229AH3BQW9 127 aa13.28□□□□□ -0.28
APBA3-201ENST00000316757 SPAG11AQ6PDA7 123 aa13.28□□□□□ -0.28
APBA3-201ENST00000316757 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
APBA3-201ENST00000316757 HSPG2P98160 4391 aa13.25□□□□□ -0.29
APBA3-201ENST00000316757 Q1T7F1 81 aa13.21□□□□□ -0.29
APBA3-201ENST00000316757 Q5VSD8 79 aa13.2□□□□□ -0.3
APBA3-201ENST00000316757 RYR1P21817 5038 aa13.18□□□□□ -0.3
APBA3-201ENST00000316757 COA5Q86WW8 74 aa13.17□□□□□ -0.3
APBA3-201ENST00000316757 RETNLBQ9BQ08 111 aa13.14□□□□□ -0.31
APBA3-201ENST00000316757 PRO0628Q9UI54 55 aa13.12□□□□□ -0.31
APBA3-201ENST00000316757 IGKV2-30P06310 120 aa13.1□□□□□ -0.31
APBA3-201ENST00000316757 V9GYY9 64 aa13.09□□□□□ -0.31
APBA3-201ENST00000316757 EPPK1P58107 5090 aaKnown RBP13.07□□□□□ -0.32
APBA3-201ENST00000316757 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
APBA3-201ENST00000316757 HRES1P13985 223 aa13.04□□□□□ -0.32
APBA3-201ENST00000316757 KRTAP17-1Q9BYP8 105 aa13.01□□□□□ -0.33
APBA3-201ENST00000316757 Q8N1X5 172 aa12.97□□□□□ -0.33
APBA3-201ENST00000316757 PSPHP1O15172 72 aa12.97□□□□□ -0.33
APBA3-201ENST00000316757 ACYP2P14621 99 aa12.94□□□□□ -0.34
APBA3-201ENST00000316757 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
APBA3-201ENST00000316757 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
APBA3-201ENST00000316757 IGKV2D-30A0A075B6S6 120 aa12.93□□□□□ -0.34
APBA3-201ENST00000316757 A8MUN3 132 aa12.92□□□□□ -0.34
APBA3-201ENST00000316757 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
APBA3-201ENST00000316757 TNXBP22105 4242 aa12.91□□□□□ -0.34
APBA3-201ENST00000316757 BRK1Q8WUW1 75 aa12.88□□□□□ -0.35
APBA3-201ENST00000316757 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
APBA3-201ENST00000316757 FAT3Q8TDW7 4589 aa12.87□□□□□ -0.35
APBA3-201ENST00000316757 C9orf92A6NGG3 77 aa12.87□□□□□ -0.35
APBA3-201ENST00000316757 Q5VV11 94 aa12.84□□□□□ -0.35
APBA3-201ENST00000316757 C20orf166-AS1Q96NR2 134 aa12.84□□□□□ -0.35
APBA3-201ENST00000316757 A8MUU9 505 aa12.84□□□□□ -0.35
APBA3-201ENST00000316757 PRR15LQ9BU68 103 aa12.83□□□□□ -0.36
APBA3-201ENST00000316757 LINC01558Q9Y6Z2 57 aa12.82□□□□□ -0.36
APBA3-201ENST00000316757 C7orf65Q6ZTY9 151 aa12.81□□□□□ -0.36
APBA3-201ENST00000316757 CHKB-CPT1BH3BT56 60 aa12.76□□□□□ -0.37
APBA3-201ENST00000316757 SEC61GP60059 68 aa12.75□□□□□ -0.37
APBA3-201ENST00000316757 Q75L30 129 aa12.73□□□□□ -0.37
APBA3-201ENST00000316757 MYCBP2O75592 4640 aa12.72□□□□□ -0.37
APBA3-201ENST00000316757 MT1HL1P0DM35 61 aa12.69□□□□□ -0.38
APBA3-201ENST00000316757 DMBT1Q9UGM3 2413 aaPredicted RBP12.66□□□□□ -0.38
APBA3-201ENST00000316757 KRTAP4-5Q9BYR2 181 aa12.62□□□□□ -0.39
APBA3-201ENST00000316757 A6NED7 52 aa12.55□□□□□ -0.4
APBA3-201ENST00000316757 SPINK7P58062 85 aa12.53□□□□□ -0.4
APBA3-201ENST00000316757 BIRC6Q9NR09 4857 aa12.47□□□□□ -0.41
APBA3-201ENST00000316757 A8MU10 97 aa12.46□□□□□ -0.41
APBA3-201ENST00000316757 LCA10Q71F78 164 aa12.44□□□□□ -0.42
APBA3-201ENST00000316757 A0A1B0GU69 56 aa12.44□□□□□ -0.42
APBA3-201ENST00000316757 ATP11AUNQ6ZP68 121 aa12.42□□□□□ -0.42
APBA3-201ENST00000316757 CDC42SE1Q9NRR8 79 aa12.41□□□□□ -0.42
APBA3-201ENST00000316757 ABCA13Q86UQ4 5058 aa12.4□□□□□ -0.42
APBA3-201ENST00000316757 RPL37P61927 97 aaKnown RBP12.39□□□□□ -0.43
APBA3-201ENST00000316757 KRTAP3-1Q9BYR8 98 aa12.39□□□□□ -0.43
APBA3-201ENST00000316757 HERC2O95714 4834 aa12.38□□□□□ -0.43
APBA3-201ENST00000316757 XP32Q5T750 250 aa12.37□□□□□ -0.43
APBA3-201ENST00000316757 PMAIP1Q13794 54 aa12.36□□□□□ -0.43
APBA3-201ENST00000316757 SPTSSBQ8NFR3 76 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms