RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
EXOSC4-201ENST00000316052 USH2AO75445 5202 aa8.97□□□□□ -0.97
EXOSC4-201ENST00000316052 SSPOA2VEC9 5147 aa8.96□□□□□ -0.98
EXOSC4-201ENST00000316052 ACYP1P07311 99 aa8.95□□□□□ -0.98
EXOSC4-201ENST00000316052 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
EXOSC4-201ENST00000316052 C20orf166-AS1Q96NR2 134 aa8.93□□□□□ -0.98
EXOSC4-201ENST00000316052 PDE6GP18545 87 aa8.92□□□□□ -0.98
EXOSC4-201ENST00000316052 A8MUU9 505 aa8.91□□□□□ -0.98
EXOSC4-201ENST00000316052 NDUFV3P56181 108 aaKnown RBP8.91□□□□□ -0.98
EXOSC4-201ENST00000316052 RBM3P98179 157 aaKnown RBP8.91□□□□□ -0.98
EXOSC4-201ENST00000316052 LOC110117498A0A087WWA1 95 aa8.9□□□□□ -0.98
EXOSC4-201ENST00000316052 VPS25Q9BRG1 176 aa8.89□□□□□ -0.99
EXOSC4-201ENST00000316052 C14orf132Q9NPU4 83 aa8.89□□□□□ -0.99
EXOSC4-201ENST00000316052 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
EXOSC4-201ENST00000316052 CCKP06307 115 aa8.87□□□□□ -0.99
EXOSC4-201ENST00000316052 DSCR8Q96T75 97 aa8.86□□□□□ -0.99
EXOSC4-201ENST00000316052 A0A087WSZ3 146 aa8.85□□□□□ -0.99
EXOSC4-201ENST00000316052 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
EXOSC4-201ENST00000316052 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.84□□□□□ -0.99
EXOSC4-201ENST00000316052 Q6ZQT0 140 aa8.84□□□□□ -0.99
EXOSC4-201ENST00000316052 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
EXOSC4-201ENST00000316052 DSCR10P59022 87 aa8.83□□□□□ -1
EXOSC4-201ENST00000316052 A0A1B0GW54 56 aa8.81□□□□□ -1
EXOSC4-201ENST00000316052 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
EXOSC4-201ENST00000316052 A0A1W2PNM2 257 aa8.78□□□□□ -1
EXOSC4-201ENST00000316052 SIGMAR1Q99720 223 aa8.78□□□□□ -1
EXOSC4-201ENST00000316052 A0A1B0GV72 72 aa8.77□□□□□ -1.01
EXOSC4-201ENST00000316052 MT2AP02795 61 aa8.77□□□□□ -1.01
EXOSC4-201ENST00000316052 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
EXOSC4-201ENST00000316052 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
EXOSC4-201ENST00000316052 LINC00313P59037 77 aa8.74□□□□□ -1.01
EXOSC4-201ENST00000316052 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
EXOSC4-201ENST00000316052 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
EXOSC4-201ENST00000316052 MT1FP04733 61 aa8.71□□□□□ -1.02
EXOSC4-201ENST00000316052 IGKV4-1P06312 121 aa8.71□□□□□ -1.02
EXOSC4-201ENST00000316052 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
EXOSC4-201ENST00000316052 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
EXOSC4-201ENST00000316052 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
EXOSC4-201ENST00000316052 HRES1P13985 223 aa8.7□□□□□ -1.02
EXOSC4-201ENST00000316052 UBL5Q9BZL1 73 aa8.7□□□□□ -1.02
EXOSC4-201ENST00000316052 LCE2BO14633 110 aa8.69□□□□□ -1.02
EXOSC4-201ENST00000316052 ATP5EP2Q5VTU8 51 aa8.69□□□□□ -1.02
EXOSC4-201ENST00000316052 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
EXOSC4-201ENST00000316052 MT-ATP8P03928 68 aa8.68□□□□□ -1.02
EXOSC4-201ENST00000316052 SCGB1A1P11684 91 aa8.67□□□□□ -1.02
EXOSC4-201ENST00000316052 DEFB116Q30KQ4 102 aa8.67□□□□□ -1.02
EXOSC4-201ENST00000316052 KRTAP9-3Q9BYQ3 159 aa8.67□□□□□ -1.02
EXOSC4-201ENST00000316052 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
EXOSC4-201ENST00000316052 Q6ZVQ6 151 aa8.64□□□□□ -1.03
EXOSC4-201ENST00000316052 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
EXOSC4-201ENST00000316052 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
EXOSC4-201ENST00000316052 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
EXOSC4-201ENST00000316052 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
EXOSC4-201ENST00000316052 CXCL6P80162 114 aa8.6□□□□□ -1.03
EXOSC4-201ENST00000316052 NREPQ16612 68 aa8.59□□□□□ -1.03
EXOSC4-201ENST00000316052 IGKV3D-7A0A0C4DH55 119 aa8.53□□□□□ -1.04
EXOSC4-201ENST00000316052 SYNE2Q8WXH0 6885 aaKnown RBP8.53□□□□□ -1.04
EXOSC4-201ENST00000316052 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.05
EXOSC4-201ENST00000316052 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
EXOSC4-201ENST00000316052 C8orf87E5RJ46 101 aa8.5□□□□□ -1.05
EXOSC4-201ENST00000316052 BPY2O14599 106 aa8.5□□□□□ -1.05
EXOSC4-201ENST00000316052 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
EXOSC4-201ENST00000316052 SPINK7P58062 85 aa8.48□□□□□ -1.05
EXOSC4-201ENST00000316052 HIST1H4AP62805 103 aaKnown RBP8.47□□□□□ -1.05
EXOSC4-201ENST00000316052 J3KT08 172 aa8.46□□□□□ -1.06
EXOSC4-201ENST00000316052 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
EXOSC4-201ENST00000316052 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
EXOSC4-201ENST00000316052 NDUFB1O75438 58 aa8.41□□□□□ -1.06
EXOSC4-201ENST00000316052 PCP4P48539 62 aa8.41□□□□□ -1.06
EXOSC4-201ENST00000316052 A0A087WVE0 104 aa8.4□□□□□ -1.06
EXOSC4-201ENST00000316052 KRTAP19-6Q3LI70 58 aa8.4□□□□□ -1.06
EXOSC4-201ENST00000316052 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
EXOSC4-201ENST00000316052 ATOX1O00244 68 aa8.39□□□□□ -1.07
EXOSC4-201ENST00000316052 A8MWP4 228 aa8.36□□□□□ -1.07
EXOSC4-201ENST00000316052 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
EXOSC4-201ENST00000316052 ANAPC13Q9BS18 74 aa8.35□□□□□ -1.07
EXOSC4-201ENST00000316052 K7EQZ3 153 aa8.34□□□□□ -1.07
EXOSC4-201ENST00000316052 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
EXOSC4-201ENST00000316052 PRR15Q8IV56 129 aa8.33□□□□□ -1.08
EXOSC4-201ENST00000316052 Q8N9L7 120 aa8.33□□□□□ -1.08
EXOSC4-201ENST00000316052 C8orf17Q9NRJ1 99 aa8.33□□□□□ -1.08
EXOSC4-201ENST00000316052 HCG22E2RYF7 251 aa8.28□□□□□ -1.08
EXOSC4-201ENST00000316052 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
EXOSC4-201ENST00000316052 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
EXOSC4-201ENST00000316052 COX7CP15954 63 aa8.24□□□□□ -1.09
EXOSC4-201ENST00000316052 UQCRQO14949 82 aa8.23□□□□□ -1.09
EXOSC4-201ENST00000316052 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
EXOSC4-201ENST00000316052 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
EXOSC4-201ENST00000316052 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
EXOSC4-201ENST00000316052 OCR1Q9BZK8 76 aa8.2□□□□□ -1.1
EXOSC4-201ENST00000316052 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
EXOSC4-201ENST00000316052 MRPL34Q9BQ48 92 aaKnown RBP8.17□□□□□ -1.1
EXOSC4-201ENST00000316052 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
EXOSC4-201ENST00000316052 KRTAP6-3Q3LI67 103 aa8.16□□□□□ -1.1
EXOSC4-201ENST00000316052 NDUFS5O43920 106 aa8.15□□□□□ -1.1
EXOSC4-201ENST00000316052 CCDC179H3BU77 68 aa8.13□□□□□ -1.11
EXOSC4-201ENST00000316052 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
EXOSC4-201ENST00000316052 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
EXOSC4-201ENST00000316052 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
EXOSC4-201ENST00000316052 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms