RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
TFE3-201ENST00000315869 A0A087WTM6 91 aa8.95□□□□□ -0.98
TFE3-201ENST00000315869 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
TFE3-201ENST00000315869 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
TFE3-201ENST00000315869 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
TFE3-201ENST00000315869 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
TFE3-201ENST00000315869 Q96NJ1 140 aa8.94□□□□□ -0.98
TFE3-201ENST00000315869 WWC2-AS2Q96NR7 200 aa8.92□□□□□ -0.98
TFE3-201ENST00000315869 IGLV5-52A0A0A0MRZ9 124 aa8.9□□□□□ -0.98
TFE3-201ENST00000315869 ZNF861PO60384 105 aa8.9□□□□□ -0.99
TFE3-201ENST00000315869 C1orf134Q5TEV5 83 aa8.89□□□□□ -0.99
TFE3-201ENST00000315869 HYDINQ4G0P3 5121 aa8.87□□□□□ -0.99
TFE3-201ENST00000315869 Q6ZR54 194 aa8.86□□□□□ -0.99
TFE3-201ENST00000315869 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
TFE3-201ENST00000315869 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
TFE3-201ENST00000315869 DNAH6Q9C0G6 4158 aa8.84□□□□□ -0.99
TFE3-201ENST00000315869 LOC101927531A0A1B0GV80 90 aa8.83□□□□□ -1
TFE3-201ENST00000315869 HRES1P13985 223 aa8.83□□□□□ -1
TFE3-201ENST00000315869 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
TFE3-201ENST00000315869 KRTAP10-2P60368 255 aa8.83□□□□□ -1
TFE3-201ENST00000315869 LINC00483Q53H64 154 aa8.83□□□□□ -1
TFE3-201ENST00000315869 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
TFE3-201ENST00000315869 LCA10Q71F78 164 aa8.81□□□□□ -1
TFE3-201ENST00000315869 Q5W150 140 aa8.81□□□□□ -1
TFE3-201ENST00000315869 Q75L30 129 aa8.79□□□□□ -1
TFE3-201ENST00000315869 DNAH11Q96DT5 4516 aa8.79□□□□□ -1
TFE3-201ENST00000315869 IGLV7-43P04211 117 aa8.78□□□□□ -1
TFE3-201ENST00000315869 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
TFE3-201ENST00000315869 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
TFE3-201ENST00000315869 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
TFE3-201ENST00000315869 SPINK7P58062 85 aa8.75□□□□□ -1.01
TFE3-201ENST00000315869 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
TFE3-201ENST00000315869 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
TFE3-201ENST00000315869 DNAH17Q9UFH2 4485 aa8.73□□□□□ -1.01
TFE3-201ENST00000315869 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
TFE3-201ENST00000315869 LINC00313P59037 77 aa8.72□□□□□ -1.01
TFE3-201ENST00000315869 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
TFE3-201ENST00000315869 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
TFE3-201ENST00000315869 ACYP2P14621 99 aa8.7□□□□□ -1.02
TFE3-201ENST00000315869 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
TFE3-201ENST00000315869 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
TFE3-201ENST00000315869 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
TFE3-201ENST00000315869 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
TFE3-201ENST00000315869 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
TFE3-201ENST00000315869 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
TFE3-201ENST00000315869 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
TFE3-201ENST00000315869 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
TFE3-201ENST00000315869 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
TFE3-201ENST00000315869 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
TFE3-201ENST00000315869 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
TFE3-201ENST00000315869 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
TFE3-201ENST00000315869 KRTAP21-3Q3LHN1 58 aa8.6□□□□□ -1.03
TFE3-201ENST00000315869 A0A1B0GU69 56 aa8.6□□□□□ -1.03
TFE3-201ENST00000315869 SPINK1P00995 79 aa8.59□□□□□ -1.03
TFE3-201ENST00000315869 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
TFE3-201ENST00000315869 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
TFE3-201ENST00000315869 A6NN06 94 aa8.56□□□□□ -1.04
TFE3-201ENST00000315869 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
TFE3-201ENST00000315869 KRTAP13-2Q52LG2 175 aa8.54□□□□□ -1.04
TFE3-201ENST00000315869 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
TFE3-201ENST00000315869 C7orf65Q6ZTY9 151 aa8.54□□□□□ -1.04
TFE3-201ENST00000315869 PKD1P98161 4303 aa8.53□□□□□ -1.04
TFE3-201ENST00000315869 PRAC1Q96KF2 57 aa8.52□□□□□ -1.04
TFE3-201ENST00000315869 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
TFE3-201ENST00000315869 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
TFE3-201ENST00000315869 ALMS1Q8TCU4 4167 aa8.49□□□□□ -1.05
TFE3-201ENST00000315869 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
TFE3-201ENST00000315869 Q8N1X5 172 aa8.47□□□□□ -1.05
TFE3-201ENST00000315869 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.06
TFE3-201ENST00000315869 FAT1Q14517 4588 aa8.45□□□□□ -1.06
TFE3-201ENST00000315869 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
TFE3-201ENST00000315869 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
TFE3-201ENST00000315869 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
TFE3-201ENST00000315869 UQCR11O14957 56 aa8.41□□□□□ -1.06
TFE3-201ENST00000315869 Q6ZSA8 131 aa8.4□□□□□ -1.06
TFE3-201ENST00000315869 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
TFE3-201ENST00000315869 KRTAP16-1A8MUX0 517 aa8.36□□□□□ -1.07
TFE3-201ENST00000315869 KRTAP1-4P0C5Y4 121 aa8.35□□□□□ -1.07
TFE3-201ENST00000315869 RYR2Q92736 4967 aa8.35□□□□□ -1.07
TFE3-201ENST00000315869 LINC00304Q8N9R0 145 aa8.31□□□□□ -1.08
TFE3-201ENST00000315869 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
TFE3-201ENST00000315869 RYR3Q15413 4870 aa8.27□□□□□ -1.09
TFE3-201ENST00000315869 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
TFE3-201ENST00000315869 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
TFE3-201ENST00000315869 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
TFE3-201ENST00000315869 LRP1Q07954 4544 aaKnown RBP8.14□□□□□ -1.11
TFE3-201ENST00000315869 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
TFE3-201ENST00000315869 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
TFE3-201ENST00000315869 H3BS24 57 aa8.07□□□□□ -1.12
TFE3-201ENST00000315869 A0A1B0GU33 70 aa8.07□□□□□ -1.12
TFE3-201ENST00000315869 CRIPTQ9P021 101 aa8.05□□□□□ -1.12
TFE3-201ENST00000315869 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
TFE3-201ENST00000315869 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
TFE3-201ENST00000315869 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
TFE3-201ENST00000315869 EPPK1P58107 5090 aaKnown RBP8.02□□□□□ -1.12
TFE3-201ENST00000315869 H0YAA0 97 aa8.01□□□□□ -1.13
TFE3-201ENST00000315869 Q5VSD8 79 aa8.01□□□□□ -1.13
TFE3-201ENST00000315869 HSPG2P98160 4391 aa7.99□□□□□ -1.13
TFE3-201ENST00000315869 A8MUU9 505 aa7.98□□□□□ -1.13
TFE3-201ENST00000315869 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms