RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 C8orf87E5RJ46 101 aa13.58□□□□□ -0.23
SNCB-201ENST00000310112 C1orf195Q5TG92 126 aa13.58□□□□□ -0.23
SNCB-201ENST00000310112 C5orf47Q569G3 176 aa13.56□□□□□ -0.24
SNCB-201ENST00000310112 TMEM254Q8TBM7 123 aa13.55□□□□□ -0.24
SNCB-201ENST00000310112 Q5VSD8 79 aa13.53□□□□□ -0.24
SNCB-201ENST00000310112 NDUFC1O43677 76 aa13.52□□□□□ -0.25
SNCB-201ENST00000310112 TP53AIP1Q9HCN2 124 aa13.51□□□□□ -0.25
SNCB-201ENST00000310112 A0A0U1RQV1 116 aa13.48□□□□□ -0.25
SNCB-201ENST00000310112 MRPL34Q9BQ48 92 aaKnown RBP13.48□□□□□ -0.25
SNCB-201ENST00000310112 TMEM258P61165 79 aa13.46□□□□□ -0.25
SNCB-201ENST00000310112 H3BPC8 53 aa13.45□□□□□ -0.26
SNCB-201ENST00000310112 MP68P56378 58 aa13.45□□□□□ -0.26
SNCB-201ENST00000310112 CYSTM1Q9H1C7 97 aa13.44□□□□□ -0.26
SNCB-201ENST00000310112 LINC00313P59037 77 aa13.43□□□□□ -0.26
SNCB-201ENST00000310112 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
SNCB-201ENST00000310112 NOTCH2NLQ7Z3S9 236 aa13.4□□□□□ -0.26
SNCB-201ENST00000310112 PKHD1L1Q86WI1 4243 aa13.4□□□□□ -0.26
SNCB-201ENST00000310112 H7BZZ5 65 aa13.38□□□□□ -0.27
SNCB-201ENST00000310112 RYR3Q15413 4870 aa13.37□□□□□ -0.27
SNCB-201ENST00000310112 Q8N1X5 172 aa13.36□□□□□ -0.27
SNCB-201ENST00000310112 TRAV22A0A0B4J277 110 aa13.35□□□□□ -0.27
SNCB-201ENST00000310112 H0Y9P7 68 aa13.35□□□□□ -0.27
SNCB-201ENST00000310112 ZCCHC13Q8WW36 166 aaKnown RBP13.35□□□□□ -0.27
SNCB-201ENST00000310112 FAT1Q14517 4588 aa13.35□□□□□ -0.27
SNCB-201ENST00000310112 NDUFS5O43920 106 aa13.33□□□□□ -0.27
SNCB-201ENST00000310112 KRTAP10-8P60410 259 aa13.32□□□□□ -0.28
SNCB-201ENST00000310112 ATP5EP56381 51 aaPredicted RBP13.28□□□□□ -0.28
SNCB-201ENST00000310112 Q8N9P0 234 aaPredicted RBP13.28□□□□□ -0.28
SNCB-201ENST00000310112 LINC00208Q96KT6 92 aa13.27□□□□□ -0.29
SNCB-201ENST00000310112 HSPG2P98160 4391 aa13.27□□□□□ -0.29
SNCB-201ENST00000310112 FAM236DA0A1B0GTK5 79 aa13.24□□□□□ -0.29
SNCB-201ENST00000310112 FAM236CP0DP71 79 aa13.24□□□□□ -0.29
SNCB-201ENST00000310112 KRTAP16-1A8MUX0 517 aa13.23□□□□□ -0.29
SNCB-201ENST00000310112 C1orf64Q8NEQ6 169 aa13.22□□□□□ -0.29
SNCB-201ENST00000310112 RYR1P21817 5038 aa13.21□□□□□ -0.29
SNCB-201ENST00000310112 KRTAP17-1Q9BYP8 105 aa13.16□□□□□ -0.3
SNCB-201ENST00000310112 RPS28P62857 69 aaKnown RBP13.14□□□□□ -0.31
SNCB-201ENST00000310112 LOC101927531A0A1B0GV80 90 aa13.12□□□□□ -0.31
SNCB-201ENST00000310112 KRTAP13-3Q3SY46 172 aa13.12□□□□□ -0.31
SNCB-201ENST00000310112 OXTP01178 125 aa13.09□□□□□ -0.31
SNCB-201ENST00000310112 FP248Q71RG6 208 aaPredicted RBP13.08□□□□□ -0.31
SNCB-201ENST00000310112 Q5W150 140 aa13.07□□□□□ -0.32
SNCB-201ENST00000310112 SPANXA2-OT1Q8N9U9 137 aa13.07□□□□□ -0.32
SNCB-201ENST00000310112 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
SNCB-201ENST00000310112 SERP1Q9Y6X1 66 aa13.04□□□□□ -0.32
SNCB-201ENST00000310112 MT1HL1P0DM35 61 aa13.02□□□□□ -0.33
SNCB-201ENST00000310112 RETNLBQ9BQ08 111 aa13.01□□□□□ -0.33
SNCB-201ENST00000310112 CYP4F30PQ9H0H9 118 aa13□□□□□ -0.33
SNCB-201ENST00000310112 C20orf166-AS1Q96NR2 134 aa12.98□□□□□ -0.33
SNCB-201ENST00000310112 A8MUU9 505 aa12.97□□□□□ -0.33
SNCB-201ENST00000310112 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
SNCB-201ENST00000310112 TNXBP22105 4242 aa12.93□□□□□ -0.34
SNCB-201ENST00000310112 IGLV7-46A0A075B6I9 117 aa12.93□□□□□ -0.34
SNCB-201ENST00000310112 C9orf92A6NGG3 77 aa12.93□□□□□ -0.34
SNCB-201ENST00000310112 IGKV2-30P06310 120 aa12.93□□□□□ -0.34
SNCB-201ENST00000310112 PCOTHQ58A44 107 aa12.91□□□□□ -0.34
SNCB-201ENST00000310112 EPPK1P58107 5090 aaKnown RBP12.9□□□□□ -0.34
SNCB-201ENST00000310112 FAT3Q8TDW7 4589 aa12.87□□□□□ -0.35
SNCB-201ENST00000310112 Q75L30 129 aa12.86□□□□□ -0.35
SNCB-201ENST00000310112 LRP1Q07954 4544 aaKnown RBP12.83□□□□□ -0.36
SNCB-201ENST00000310112 KRTAP4-5Q9BYR2 181 aa12.8□□□□□ -0.36
SNCB-201ENST00000310112 PRR4Q16378 134 aa12.79□□□□□ -0.36
SNCB-201ENST00000310112 C7orf65Q6ZTY9 151 aa12.78□□□□□ -0.36
SNCB-201ENST00000310112 DMBT1Q9UGM3 2413 aaPredicted RBP12.76□□□□□ -0.37
SNCB-201ENST00000310112 IGKV2D-30A0A075B6S6 120 aa12.75□□□□□ -0.37
SNCB-201ENST00000310112 SMIM26A0A096LP01 95 aa12.73□□□□□ -0.37
SNCB-201ENST00000310112 HRES1P13985 223 aa12.72□□□□□ -0.37
SNCB-201ENST00000310112 RPL37P61927 97 aaKnown RBP12.67□□□□□ -0.38
SNCB-201ENST00000310112 XP32Q5T750 250 aa12.64□□□□□ -0.39
SNCB-201ENST00000310112 ATP11AUNQ6ZP68 121 aa12.64□□□□□ -0.39
SNCB-201ENST00000310112 TPRXLQ17RH7 258 aa12.63□□□□□ -0.39
SNCB-201ENST00000310112 DMAC1Q96GE9 116 aa12.62□□□□□ -0.39
SNCB-201ENST00000310112 ACYP2P14621 99 aa12.61□□□□□ -0.39
SNCB-201ENST00000310112 COA5Q86WW8 74 aa12.6□□□□□ -0.39
SNCB-201ENST00000310112 J3QL48 77 aa12.58□□□□□ -0.4
SNCB-201ENST00000310112 MYCBP2O75592 4640 aa12.55□□□□□ -0.4
SNCB-201ENST00000310112 SPINK7P58062 85 aa12.54□□□□□ -0.4
SNCB-201ENST00000310112 BIRC6Q9NR09 4857 aa12.53□□□□□ -0.4
SNCB-201ENST00000310112 A8MUN3 132 aa12.52□□□□□ -0.41
SNCB-201ENST00000310112 V9GYY9 64 aa12.45□□□□□ -0.42
SNCB-201ENST00000310112 Q1T7F1 81 aa12.43□□□□□ -0.42
SNCB-201ENST00000310112 HERC2O95714 4834 aa12.42□□□□□ -0.42
SNCB-201ENST00000310112 CHKB-CPT1BH3BT56 60 aa12.38□□□□□ -0.43
SNCB-201ENST00000310112 C4orf26Q17RF5 130 aa12.38□□□□□ -0.43
SNCB-201ENST00000310112 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
SNCB-201ENST00000310112 COX6B2Q6YFQ2 88 aa12.3□□□□□ -0.44
SNCB-201ENST00000310112 ABCA13Q86UQ4 5058 aa12.26□□□□□ -0.45
SNCB-201ENST00000310112 LINC01558Q9Y6Z2 57 aa12.22□□□□□ -0.45
SNCB-201ENST00000310112 SEC61BP60468 96 aaKnown RBP12.21□□□□□ -0.45
SNCB-201ENST00000310112 KRTAP3-1Q9BYR8 98 aa12.21□□□□□ -0.45
SNCB-201ENST00000310112 SPTSSBQ8NFR3 76 aa12.2□□□□□ -0.46
SNCB-201ENST00000310112 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
SNCB-201ENST00000310112 PSPHP1O15172 72 aa12.07□□□□□ -0.48
SNCB-201ENST00000310112 RBM12B-AS1Q9P1G2 102 aa12.04□□□□□ -0.48
SNCB-201ENST00000310112 Q5VV11 94 aa12.02□□□□□ -0.49
SNCB-201ENST00000310112 H1FX-AS1Q4G0G2 97 aa11.95□□□□□ -0.5
SNCB-201ENST00000310112 A0A1B0GU69 56 aa11.94□□□□□ -0.5
SNCB-201ENST00000310112 LRP2P98164 4655 aa11.91□□□□□ -0.5
SNCB-201ENST00000310112 S4R3F8 94 aa11.9□□□□□ -0.5
SNCB-201ENST00000310112 LPAP08519 4548 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms