RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 Q6ZSA8 131 aa3.19□□□□□ -1.9
VPS50-202ENST00000305866 IGKV2-24A0A0C4DH68 120 aa3.19□□□□□ -1.9
VPS50-202ENST00000305866 COA5Q86WW8 74 aa3.19□□□□□ -1.9
VPS50-202ENST00000305866 PRR4Q16378 134 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 CASC2Q6XLA1 102 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 WFDC13Q8IUB5 93 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.18□□□□□ -1.9
VPS50-202ENST00000305866 DNHD1Q96M86 4753 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 V9GYY9 64 aa3.18□□□□□ -1.9
VPS50-202ENST00000305866 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 ZNF861PO60384 105 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 PRR26Q8N8Z3 221 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 MDFIQ99750 246 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 STAB1Q9NY15 2570 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 LIMD2Q9BT23 127 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 SPINK7P58062 85 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 CDC42SE1Q9NRR8 79 aa3.17□□□□□ -1.9
VPS50-202ENST00000305866 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
VPS50-202ENST00000305866 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
VPS50-202ENST00000305866 MP68P56378 58 aa3.15□□□□□ -1.9
VPS50-202ENST00000305866 ATP11AUNQ6ZP68 121 aa3.15□□□□□ -1.9
VPS50-202ENST00000305866 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.9
VPS50-202ENST00000305866 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.91
VPS50-202ENST00000305866 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
VPS50-202ENST00000305866 PSORS1C2Q9UIG4 136 aa3.14□□□□□ -1.91
VPS50-202ENST00000305866 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
VPS50-202ENST00000305866 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 RTL8CO15255 209 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 KRTAP21-3Q3LHN1 58 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 RBM12B-AS1Q9P1G2 102 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 LRP1Q07954 4544 aaKnown RBP3.13□□□□□ -1.91
VPS50-202ENST00000305866 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
VPS50-202ENST00000305866 TGP01266 2768 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
VPS50-202ENST00000305866 IGLV7-43P04211 117 aa3.13□□□□□ -1.91
VPS50-202ENST00000305866 UBE2DNLQ8IWF7 75 aa3.12□□□□□ -1.91
VPS50-202ENST00000305866 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
VPS50-202ENST00000305866 MRPL34Q9BQ48 92 aaKnown RBP3.12□□□□□ -1.91
VPS50-202ENST00000305866 DYNC1H1Q14204 4646 aaKnown RBP3.11□□□□□ -1.91
VPS50-202ENST00000305866 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 NOTCH1P46531 2555 aa3.11□□□□□ -1.91
VPS50-202ENST00000305866 FAT1Q14517 4588 aa3.1□□□□□ -1.91
VPS50-202ENST00000305866 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
VPS50-202ENST00000305866 F8P00451 2351 aa3.09□□□□□ -1.91
VPS50-202ENST00000305866 CHKB-CPT1BH3BT56 60 aa3.08□□□□□ -1.92
VPS50-202ENST00000305866 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
VPS50-202ENST00000305866 PLA2G1BP04054 148 aaKnown RBP3.07□□□□□ -1.92
VPS50-202ENST00000305866 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
VPS50-202ENST00000305866 PCOTHQ58A44 107 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 C1orf134Q5TEV5 83 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 SPAG11AQ6PDA7 123 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 C7orf65Q6ZTY9 151 aa3.06□□□□□ -1.92
VPS50-202ENST00000305866 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
VPS50-202ENST00000305866 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
VPS50-202ENST00000305866 NDUFS5O43920 106 aa3.04□□□□□ -1.92
VPS50-202ENST00000305866 CIRBP-AS1Q8TBR5 109 aa3.04□□□□□ -1.92
VPS50-202ENST00000305866 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
VPS50-202ENST00000305866 IGLV9-49A0A0B4J1Y8 123 aa3.03□□□□□ -1.92
VPS50-202ENST00000305866 FAM229AH3BQW9 127 aa3.03□□□□□ -1.92
VPS50-202ENST00000305866 LINC00313P59037 77 aa3.03□□□□□ -1.92
VPS50-202ENST00000305866 KRTAP3-1Q9BYR8 98 aa3.02□□□□□ -1.93
VPS50-202ENST00000305866 LPAP08519 4548 aa3.02□□□□□ -1.93
VPS50-202ENST00000305866 KRTAP10-2P60368 255 aa3.02□□□□□ -1.93
VPS50-202ENST00000305866 KRTAP10-1P60331 282 aa3.01□□□□□ -1.93
VPS50-202ENST00000305866 A0A1B0GVY2 172 aa3□□□□□ -1.93
VPS50-202ENST00000305866 RYR2Q92736 4967 aa3□□□□□ -1.93
VPS50-202ENST00000305866 A6NED7 52 aa3□□□□□ -1.93
VPS50-202ENST00000305866 SPINK1P00995 79 aa3□□□□□ -1.93
VPS50-202ENST00000305866 SPINK6Q6UWN8 80 aa2.99□□□□□ -1.93
VPS50-202ENST00000305866 ACYP2P14621 99 aa2.99□□□□□ -1.93
VPS50-202ENST00000305866 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
VPS50-202ENST00000305866 CDK2AP2O75956 126 aa2.98□□□□□ -1.93
VPS50-202ENST00000305866 C20orf166-AS1Q96NR2 134 aa2.98□□□□□ -1.93
VPS50-202ENST00000305866 IGKV2D-30A0A075B6S6 120 aa2.98□□□□□ -1.93
VPS50-202ENST00000305866 A8MUU9 505 aa2.97□□□□□ -1.93
VPS50-202ENST00000305866 H0YAA0 97 aa2.97□□□□□ -1.93
VPS50-202ENST00000305866 J3QL48 77 aa2.95□□□□□ -1.94
VPS50-202ENST00000305866 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
VPS50-202ENST00000305866 KMT2CQ8NEZ4 4911 aaKnown RBP2.92□□□□□ -1.94
VPS50-202ENST00000305866 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
VPS50-202ENST00000305866 MUC17Q685J3 4493 aa2.9□□□□□ -1.94
VPS50-202ENST00000305866 MGAM2Q2M2H8 2515 aa2.9□□□□□ -1.95
VPS50-202ENST00000305866 LY6G6CO95867 125 aa2.9□□□□□ -1.95
VPS50-202ENST00000305866 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
VPS50-202ENST00000305866 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
VPS50-202ENST00000305866 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
VPS50-202ENST00000305866 KRTAP10-6P60371 365 aaPredicted RBP2.88□□□□□ -1.95
VPS50-202ENST00000305866 A0A1B0GU69 56 aa2.87□□□□□ -1.95
VPS50-202ENST00000305866 RYR3Q15413 4870 aa2.87□□□□□ -1.95
VPS50-202ENST00000305866 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
VPS50-202ENST00000305866 CSAG1Q6PB30 78 aa2.87□□□□□ -1.95
VPS50-202ENST00000305866 UQCR11O14957 56 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms