RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 NOTCH2NLQ7Z3S9 236 aa8.58□□□□□ -1.04
SMG8-201ENST00000300917 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
SMG8-201ENST00000300917 NDUFS5O43920 106 aa8.58□□□□□ -1.04
SMG8-201ENST00000300917 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
SMG8-201ENST00000300917 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
SMG8-201ENST00000300917 hDV103S1A0JD37 113 aa8.56□□□□□ -1.04
SMG8-201ENST00000300917 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
SMG8-201ENST00000300917 NDUFC1O43677 76 aa8.55□□□□□ -1.04
SMG8-201ENST00000300917 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
SMG8-201ENST00000300917 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
SMG8-201ENST00000300917 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
SMG8-201ENST00000300917 H0Y9P7 68 aa8.53□□□□□ -1.04
SMG8-201ENST00000300917 C8orf17Q9NRJ1 99 aa8.52□□□□□ -1.05
SMG8-201ENST00000300917 MP68P56378 58 aa8.52□□□□□ -1.05
SMG8-201ENST00000300917 A0A1B0GVX0 72 aa8.51□□□□□ -1.05
SMG8-201ENST00000300917 LCE6AA0A183 80 aa8.5□□□□□ -1.05
SMG8-201ENST00000300917 DYNC1H1Q14204 4646 aaKnown RBP8.5□□□□□ -1.05
SMG8-201ENST00000300917 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
SMG8-201ENST00000300917 FAT1Q14517 4588 aa8.5□□□□□ -1.05
SMG8-201ENST00000300917 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
SMG8-201ENST00000300917 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
SMG8-201ENST00000300917 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
SMG8-201ENST00000300917 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
SMG8-201ENST00000300917 PSPHP1O15172 72 aa8.47□□□□□ -1.05
SMG8-201ENST00000300917 A8MU10 97 aa8.46□□□□□ -1.05
SMG8-201ENST00000300917 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.05
SMG8-201ENST00000300917 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
SMG8-201ENST00000300917 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
SMG8-201ENST00000300917 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
SMG8-201ENST00000300917 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
SMG8-201ENST00000300917 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
SMG8-201ENST00000300917 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
SMG8-201ENST00000300917 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
SMG8-201ENST00000300917 RYR2Q92736 4967 aa8.4□□□□□ -1.06
SMG8-201ENST00000300917 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
SMG8-201ENST00000300917 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
SMG8-201ENST00000300917 ASB16-AS1Q495Z4 193 aa8.35□□□□□ -1.07
SMG8-201ENST00000300917 Q5W150 140 aa8.34□□□□□ -1.07
SMG8-201ENST00000300917 LINC00313P59037 77 aa8.33□□□□□ -1.08
SMG8-201ENST00000300917 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
SMG8-201ENST00000300917 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
SMG8-201ENST00000300917 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
SMG8-201ENST00000300917 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.08
SMG8-201ENST00000300917 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
SMG8-201ENST00000300917 A8MUN3 132 aa8.27□□□□□ -1.09
SMG8-201ENST00000300917 H3BPC8 53 aa8.26□□□□□ -1.09
SMG8-201ENST00000300917 RYR3Q15413 4870 aa8.26□□□□□ -1.09
SMG8-201ENST00000300917 Q1T7F1 81 aa8.23□□□□□ -1.09
SMG8-201ENST00000300917 SPINK1P00995 79 aa8.23□□□□□ -1.09
SMG8-201ENST00000300917 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
SMG8-201ENST00000300917 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
SMG8-201ENST00000300917 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
SMG8-201ENST00000300917 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
SMG8-201ENST00000300917 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
SMG8-201ENST00000300917 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
SMG8-201ENST00000300917 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
SMG8-201ENST00000300917 IGKV2D-30A0A075B6S6 120 aa8.16□□□□□ -1.1
SMG8-201ENST00000300917 CHKB-CPT1BH3BT56 60 aa8.16□□□□□ -1.1
SMG8-201ENST00000300917 IGKV2-30P06310 120 aa8.16□□□□□ -1.1
SMG8-201ENST00000300917 SPANXA2-OT1Q8N9U9 137 aa8.16□□□□□ -1.1
SMG8-201ENST00000300917 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
SMG8-201ENST00000300917 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
SMG8-201ENST00000300917 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.11
SMG8-201ENST00000300917 COA5Q86WW8 74 aa8.14□□□□□ -1.11
SMG8-201ENST00000300917 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
SMG8-201ENST00000300917 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
SMG8-201ENST00000300917 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
SMG8-201ENST00000300917 LCA10Q71F78 164 aa8.12□□□□□ -1.11
SMG8-201ENST00000300917 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
SMG8-201ENST00000300917 Q5VSD8 79 aa8.1□□□□□ -1.11
SMG8-201ENST00000300917 HRES1P13985 223 aa8.09□□□□□ -1.11
SMG8-201ENST00000300917 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
SMG8-201ENST00000300917 Q5VV11 94 aa8.08□□□□□ -1.12
SMG8-201ENST00000300917 HSPG2P98160 4391 aa8.07□□□□□ -1.12
SMG8-201ENST00000300917 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
SMG8-201ENST00000300917 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
SMG8-201ENST00000300917 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
SMG8-201ENST00000300917 A6NED7 52 aa8.04□□□□□ -1.12
SMG8-201ENST00000300917 Q8N1X5 172 aa8.04□□□□□ -1.12
SMG8-201ENST00000300917 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
SMG8-201ENST00000300917 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
SMG8-201ENST00000300917 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
SMG8-201ENST00000300917 RYR1P21817 5038 aa7.99□□□□□ -1.13
SMG8-201ENST00000300917 A6NN06 94 aa7.99□□□□□ -1.13
SMG8-201ENST00000300917 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
SMG8-201ENST00000300917 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
SMG8-201ENST00000300917 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
SMG8-201ENST00000300917 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
SMG8-201ENST00000300917 ACYP2P14621 99 aa7.93□□□□□ -1.14
SMG8-201ENST00000300917 DMAC1Q96GE9 116 aa7.9□□□□□ -1.15
SMG8-201ENST00000300917 TNXBP22105 4242 aa7.89□□□□□ -1.15
SMG8-201ENST00000300917 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
SMG8-201ENST00000300917 Q75L30 129 aa7.88□□□□□ -1.15
SMG8-201ENST00000300917 FAT3Q8TDW7 4589 aa7.87□□□□□ -1.15
SMG8-201ENST00000300917 A8MUU9 505 aa7.84□□□□□ -1.15
SMG8-201ENST00000300917 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
SMG8-201ENST00000300917 SPINK7P58062 85 aa7.82□□□□□ -1.16
SMG8-201ENST00000300917 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
SMG8-201ENST00000300917 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
SMG8-201ENST00000300917 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms