RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 DEFB116Q30KQ4 102 aa3.95□□□□□ -1.78
DEFB1-201ENST00000297439 A0A1B0GVX0 72 aa3.94□□□□□ -1.78
DEFB1-201ENST00000297439 IGLV7-43P04211 117 aa3.94□□□□□ -1.78
DEFB1-201ENST00000297439 SSBP3-AS1Q7Z2R9 100 aa3.94□□□□□ -1.78
DEFB1-201ENST00000297439 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 Q1T7F1 81 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 HRCT1Q6UXD1 115 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 Q6ZSA8 131 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 LINC00208Q96KT6 92 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
DEFB1-201ENST00000297439 PLECQ15149 4684 aaKnown RBP3.92□□□□□ -1.78
DEFB1-201ENST00000297439 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
DEFB1-201ENST00000297439 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
DEFB1-201ENST00000297439 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
DEFB1-201ENST00000297439 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
DEFB1-201ENST00000297439 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
DEFB1-201ENST00000297439 V9GYY9 64 aa3.91□□□□□ -1.78
DEFB1-201ENST00000297439 IGLV7-46A0A075B6I9 117 aa3.9□□□□□ -1.79
DEFB1-201ENST00000297439 C8orf87E5RJ46 101 aa3.9□□□□□ -1.79
DEFB1-201ENST00000297439 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
DEFB1-201ENST00000297439 C1orf195Q5TG92 126 aa3.9□□□□□ -1.79
DEFB1-201ENST00000297439 MRPL34Q9BQ48 92 aaKnown RBP3.9□□□□□ -1.79
DEFB1-201ENST00000297439 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
DEFB1-201ENST00000297439 Q8N1X5 172 aa3.89□□□□□ -1.79
DEFB1-201ENST00000297439 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
DEFB1-201ENST00000297439 DNAH17Q9UFH2 4485 aa3.89□□□□□ -1.79
DEFB1-201ENST00000297439 LYSTQ99698 3801 aa3.88□□□□□ -1.79
DEFB1-201ENST00000297439 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
DEFB1-201ENST00000297439 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
DEFB1-201ENST00000297439 LY6G6CO95867 125 aa3.87□□□□□ -1.79
DEFB1-201ENST00000297439 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
DEFB1-201ENST00000297439 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
DEFB1-201ENST00000297439 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
DEFB1-201ENST00000297439 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
DEFB1-201ENST00000297439 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
DEFB1-201ENST00000297439 LOC101927531A0A1B0GV80 90 aa3.86□□□□□ -1.79
DEFB1-201ENST00000297439 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
DEFB1-201ENST00000297439 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
DEFB1-201ENST00000297439 LIMD2Q9BT23 127 aa3.84□□□□□ -1.79
DEFB1-201ENST00000297439 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
DEFB1-201ENST00000297439 HECTD4Q9Y4D8 3996 aa3.83□□□□□ -1.8
DEFB1-201ENST00000297439 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
DEFB1-201ENST00000297439 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
DEFB1-201ENST00000297439 MPLKIPQ8TAP9 179 aa3.83□□□□□ -1.8
DEFB1-201ENST00000297439 DNAH2Q9P225 4427 aa3.83□□□□□ -1.8
DEFB1-201ENST00000297439 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
DEFB1-201ENST00000297439 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
DEFB1-201ENST00000297439 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
DEFB1-201ENST00000297439 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
DEFB1-201ENST00000297439 A0A087X002 238 aa3.81□□□□□ -1.8
DEFB1-201ENST00000297439 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
DEFB1-201ENST00000297439 PRR4Q16378 134 aa3.81□□□□□ -1.8
DEFB1-201ENST00000297439 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
DEFB1-201ENST00000297439 COA5Q86WW8 74 aa3.81□□□□□ -1.8
DEFB1-201ENST00000297439 FBN3Q75N90 2809 aa3.8□□□□□ -1.8
DEFB1-201ENST00000297439 NDUFS5O43920 106 aa3.8□□□□□ -1.8
DEFB1-201ENST00000297439 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
DEFB1-201ENST00000297439 LINC00313P59037 77 aa3.79□□□□□ -1.8
DEFB1-201ENST00000297439 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 SPINK1P00995 79 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 Q5VV11 94 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
DEFB1-201ENST00000297439 PCOTHQ58A44 107 aa3.77□□□□□ -1.81
DEFB1-201ENST00000297439 Q5W150 140 aa3.77□□□□□ -1.81
DEFB1-201ENST00000297439 Q75L30 129 aa3.77□□□□□ -1.81
DEFB1-201ENST00000297439 SPAG11AQ6PDA7 123 aa3.76□□□□□ -1.81
DEFB1-201ENST00000297439 PRR26Q8N8Z3 221 aa3.76□□□□□ -1.81
DEFB1-201ENST00000297439 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
DEFB1-201ENST00000297439 KMT2AQ03164 3969 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 A8MUN3 132 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 HRES1P13985 223 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 TGP01266 2768 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
DEFB1-201ENST00000297439 PSPHP1O15172 72 aa3.74□□□□□ -1.81
DEFB1-201ENST00000297439 ACYP2P14621 99 aa3.74□□□□□ -1.81
DEFB1-201ENST00000297439 TYMSOSQ8TAI1 123 aa3.73□□□□□ -1.81
DEFB1-201ENST00000297439 DNAH5Q8TE73 4624 aa3.73□□□□□ -1.81
DEFB1-201ENST00000297439 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
DEFB1-201ENST00000297439 FRAS1Q86XX4 4008 aa3.71□□□□□ -1.82
DEFB1-201ENST00000297439 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
DEFB1-201ENST00000297439 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
DEFB1-201ENST00000297439 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
DEFB1-201ENST00000297439 PKD1P98161 4303 aa3.7□□□□□ -1.82
DEFB1-201ENST00000297439 CHKB-CPT1BH3BT56 60 aa3.69□□□□□ -1.82
DEFB1-201ENST00000297439 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
DEFB1-201ENST00000297439 FAT2Q9NYQ8 4349 aa3.68□□□□□ -1.82
DEFB1-201ENST00000297439 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
DEFB1-201ENST00000297439 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
DEFB1-201ENST00000297439 LRP1BQ9NZR2 4599 aa3.67□□□□□ -1.82
DEFB1-201ENST00000297439 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
DEFB1-201ENST00000297439 A6NED7 52 aa3.65□□□□□ -1.83
DEFB1-201ENST00000297439 A8MUU9 505 aa3.65□□□□□ -1.83
DEFB1-201ENST00000297439 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
DEFB1-201ENST00000297439 LCA10Q71F78 164 aa3.65□□□□□ -1.83
DEFB1-201ENST00000297439 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.83
DEFB1-201ENST00000297439 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms