RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 A0A1B0GVX0 72 aa7.83□□□□□ -1.16
CHMP4C-201ENST00000297265 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
CHMP4C-201ENST00000297265 C8orf17Q9NRJ1 99 aa7.81□□□□□ -1.16
CHMP4C-201ENST00000297265 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
CHMP4C-201ENST00000297265 hDV103S1A0JD37 113 aa7.8□□□□□ -1.16
CHMP4C-201ENST00000297265 PRR26Q8N8Z3 221 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 HSPG2P98160 4391 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 TMEM258P61165 79 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 C1orf195Q5TG92 126 aa7.79□□□□□ -1.16
CHMP4C-201ENST00000297265 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
CHMP4C-201ENST00000297265 C5orf47Q569G3 176 aa7.77□□□□□ -1.17
CHMP4C-201ENST00000297265 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
CHMP4C-201ENST00000297265 CDK2AP2O75956 126 aa7.75□□□□□ -1.17
CHMP4C-201ENST00000297265 SPINK1P00995 79 aa7.73□□□□□ -1.17
CHMP4C-201ENST00000297265 NDUFC1O43677 76 aa7.72□□□□□ -1.17
CHMP4C-201ENST00000297265 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
CHMP4C-201ENST00000297265 RYR1P21817 5038 aa7.71□□□□□ -1.18
CHMP4C-201ENST00000297265 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
CHMP4C-201ENST00000297265 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
CHMP4C-201ENST00000297265 H0Y9P7 68 aa7.68□□□□□ -1.18
CHMP4C-201ENST00000297265 J3QL48 77 aa7.68□□□□□ -1.18
CHMP4C-201ENST00000297265 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
CHMP4C-201ENST00000297265 TP53AIP1Q9HCN2 124 aa7.67□□□□□ -1.18
CHMP4C-201ENST00000297265 HERC2O95714 4834 aa7.67□□□□□ -1.18
CHMP4C-201ENST00000297265 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 FAM236DA0A1B0GTK5 79 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 FAM236CP0DP71 79 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 TRAV22A0A0B4J277 110 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 MP68P56378 58 aa7.66□□□□□ -1.18
CHMP4C-201ENST00000297265 TNXBP22105 4242 aa7.65□□□□□ -1.18
CHMP4C-201ENST00000297265 LINC00313P59037 77 aa7.65□□□□□ -1.18
CHMP4C-201ENST00000297265 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
CHMP4C-201ENST00000297265 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.19
CHMP4C-201ENST00000297265 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
CHMP4C-201ENST00000297265 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
CHMP4C-201ENST00000297265 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
CHMP4C-201ENST00000297265 OXTP01178 125 aa7.64□□□□□ -1.19
CHMP4C-201ENST00000297265 H3BPC8 53 aa7.63□□□□□ -1.19
CHMP4C-201ENST00000297265 NDUFS5O43920 106 aa7.63□□□□□ -1.19
CHMP4C-201ENST00000297265 Q5VSD8 79 aa7.63□□□□□ -1.19
CHMP4C-201ENST00000297265 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
CHMP4C-201ENST00000297265 Q5W150 140 aa7.62□□□□□ -1.19
CHMP4C-201ENST00000297265 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
CHMP4C-201ENST00000297265 C1orf64Q8NEQ6 169 aa7.61□□□□□ -1.19
CHMP4C-201ENST00000297265 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
CHMP4C-201ENST00000297265 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
CHMP4C-201ENST00000297265 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
CHMP4C-201ENST00000297265 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
CHMP4C-201ENST00000297265 Q8N1X5 172 aa7.55□□□□□ -1.2
CHMP4C-201ENST00000297265 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
CHMP4C-201ENST00000297265 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
CHMP4C-201ENST00000297265 PRR4Q16378 134 aa7.5□□□□□ -1.21
CHMP4C-201ENST00000297265 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
CHMP4C-201ENST00000297265 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
CHMP4C-201ENST00000297265 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
CHMP4C-201ENST00000297265 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
CHMP4C-201ENST00000297265 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
CHMP4C-201ENST00000297265 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
CHMP4C-201ENST00000297265 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
CHMP4C-201ENST00000297265 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
CHMP4C-201ENST00000297265 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
CHMP4C-201ENST00000297265 IGKV2-30P06310 120 aa7.41□□□□□ -1.22
CHMP4C-201ENST00000297265 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
CHMP4C-201ENST00000297265 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.23
CHMP4C-201ENST00000297265 A8MUU9 505 aa7.39□□□□□ -1.23
CHMP4C-201ENST00000297265 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
CHMP4C-201ENST00000297265 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CHMP4C-201ENST00000297265 HRES1P13985 223 aa7.34□□□□□ -1.23
CHMP4C-201ENST00000297265 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
CHMP4C-201ENST00000297265 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
CHMP4C-201ENST00000297265 COA5Q86WW8 74 aa7.29□□□□□ -1.24
CHMP4C-201ENST00000297265 Q75L30 129 aa7.28□□□□□ -1.24
CHMP4C-201ENST00000297265 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
CHMP4C-201ENST00000297265 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
CHMP4C-201ENST00000297265 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
CHMP4C-201ENST00000297265 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
CHMP4C-201ENST00000297265 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
CHMP4C-201ENST00000297265 Q1T7F1 81 aa7.22□□□□□ -1.25
CHMP4C-201ENST00000297265 XP32Q5T750 250 aa7.21□□□□□ -1.25
CHMP4C-201ENST00000297265 ACYP2P14621 99 aa7.19□□□□□ -1.26
CHMP4C-201ENST00000297265 SPINK7P58062 85 aa7.18□□□□□ -1.26
CHMP4C-201ENST00000297265 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
CHMP4C-201ENST00000297265 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
CHMP4C-201ENST00000297265 LPAP08519 4548 aa7.13□□□□□ -1.27
CHMP4C-201ENST00000297265 LRP2P98164 4655 aa7.12□□□□□ -1.27
CHMP4C-201ENST00000297265 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
CHMP4C-201ENST00000297265 LCE2BO14633 110 aa7.11□□□□□ -1.27
CHMP4C-201ENST00000297265 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
CHMP4C-201ENST00000297265 PSPHP1O15172 72 aa7.09□□□□□ -1.28
CHMP4C-201ENST00000297265 V9GYY9 64 aa7.09□□□□□ -1.28
CHMP4C-201ENST00000297265 A8MUN3 132 aa7.08□□□□□ -1.28
CHMP4C-201ENST00000297265 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
CHMP4C-201ENST00000297265 Q5VV11 94 aa7.05□□□□□ -1.28
CHMP4C-201ENST00000297265 CHKB-CPT1BH3BT56 60 aa7.04□□□□□ -1.28
CHMP4C-201ENST00000297265 HERC1Q15751 4861 aa7.03□□□□□ -1.28
CHMP4C-201ENST00000297265 COX6B2Q6YFQ2 88 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms