RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 A0A1B0GVX0 72 aa10.04□□□□□ -0.8
CHRNE-201ENST00000293780 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
CHRNE-201ENST00000293780 COA5Q86WW8 74 aa10.04□□□□□ -0.8
CHRNE-201ENST00000293780 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
CHRNE-201ENST00000293780 ZNF861PO60384 105 aa10.03□□□□□ -0.8
CHRNE-201ENST00000293780 CD164Q04900 197 aa10.02□□□□□ -0.8
CHRNE-201ENST00000293780 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.8
CHRNE-201ENST00000293780 ALMS1Q8TCU4 4167 aa10.02□□□□□ -0.81
CHRNE-201ENST00000293780 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
CHRNE-201ENST00000293780 Q6ZR54 194 aa10□□□□□ -0.81
CHRNE-201ENST00000293780 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
CHRNE-201ENST00000293780 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
CHRNE-201ENST00000293780 SPTSSBQ8NFR3 76 aa9.99□□□□□ -0.81
CHRNE-201ENST00000293780 TGP01266 2768 aa9.99□□□□□ -0.81
CHRNE-201ENST00000293780 Q75L30 129 aa9.99□□□□□ -0.81
CHRNE-201ENST00000293780 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
CHRNE-201ENST00000293780 LCA10Q71F78 164 aa9.98□□□□□ -0.81
CHRNE-201ENST00000293780 MRPL34Q9BQ48 92 aaKnown RBP9.98□□□□□ -0.81
CHRNE-201ENST00000293780 A6NED7 52 aa9.97□□□□□ -0.81
CHRNE-201ENST00000293780 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
CHRNE-201ENST00000293780 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
CHRNE-201ENST00000293780 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
CHRNE-201ENST00000293780 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
CHRNE-201ENST00000293780 KTN1-AS1Q86SY8 53 aa9.92□□□□□ -0.82
CHRNE-201ENST00000293780 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
CHRNE-201ENST00000293780 IGLV7-43P04211 117 aa9.91□□□□□ -0.82
CHRNE-201ENST00000293780 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
CHRNE-201ENST00000293780 Q5W150 140 aa9.88□□□□□ -0.83
CHRNE-201ENST00000293780 C1orf134Q5TEV5 83 aa9.88□□□□□ -0.83
CHRNE-201ENST00000293780 CDC42SE1Q9NRR8 79 aa9.87□□□□□ -0.83
CHRNE-201ENST00000293780 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
CHRNE-201ENST00000293780 HRES1P13985 223 aa9.85□□□□□ -0.83
CHRNE-201ENST00000293780 A6NN06 94 aa9.84□□□□□ -0.83
CHRNE-201ENST00000293780 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
CHRNE-201ENST00000293780 LY6G6CO95867 125 aa9.8□□□□□ -0.84
CHRNE-201ENST00000293780 RBM12B-AS1Q9P1G2 102 aa9.8□□□□□ -0.84
CHRNE-201ENST00000293780 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
CHRNE-201ENST00000293780 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
CHRNE-201ENST00000293780 SPINK7P58062 85 aa9.77□□□□□ -0.85
CHRNE-201ENST00000293780 SSBP3-AS1Q7Z2R9 100 aa9.77□□□□□ -0.85
CHRNE-201ENST00000293780 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
CHRNE-201ENST00000293780 PKD1P98161 4303 aa9.73□□□□□ -0.85
CHRNE-201ENST00000293780 PRR26Q8N8Z3 221 aa9.73□□□□□ -0.85
CHRNE-201ENST00000293780 HYDINQ4G0P3 5121 aa9.72□□□□□ -0.85
CHRNE-201ENST00000293780 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
CHRNE-201ENST00000293780 C8orf87E5RJ46 101 aa9.71□□□□□ -0.86
CHRNE-201ENST00000293780 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
CHRNE-201ENST00000293780 LINC00313P59037 77 aa9.7□□□□□ -0.86
CHRNE-201ENST00000293780 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
CHRNE-201ENST00000293780 FAT2Q9NYQ8 4349 aa9.68□□□□□ -0.86
CHRNE-201ENST00000293780 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
CHRNE-201ENST00000293780 ACYP2P14621 99 aa9.63□□□□□ -0.87
CHRNE-201ENST00000293780 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
CHRNE-201ENST00000293780 Q6ZSA8 131 aa9.59□□□□□ -0.87
CHRNE-201ENST00000293780 DMAC1Q96GE9 116 aa9.59□□□□□ -0.87
CHRNE-201ENST00000293780 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
CHRNE-201ENST00000293780 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
CHRNE-201ENST00000293780 KRTAP1-4P0C5Y4 121 aa9.57□□□□□ -0.88
CHRNE-201ENST00000293780 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
CHRNE-201ENST00000293780 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
CHRNE-201ENST00000293780 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
CHRNE-201ENST00000293780 PRAC1Q96KF2 57 aa9.46□□□□□ -0.89
CHRNE-201ENST00000293780 PKHD1P08F94 4074 aa9.46□□□□□ -0.9
CHRNE-201ENST00000293780 A0A1B0GU69 56 aa9.45□□□□□ -0.9
CHRNE-201ENST00000293780 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
CHRNE-201ENST00000293780 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
CHRNE-201ENST00000293780 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
CHRNE-201ENST00000293780 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.9
CHRNE-201ENST00000293780 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
CHRNE-201ENST00000293780 RYR2Q92736 4967 aa9.37□□□□□ -0.91
CHRNE-201ENST00000293780 SPINK1P00995 79 aa9.37□□□□□ -0.91
CHRNE-201ENST00000293780 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
CHRNE-201ENST00000293780 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
CHRNE-201ENST00000293780 UQCR11O14957 56 aa9.31□□□□□ -0.92
CHRNE-201ENST00000293780 Q8N1X5 172 aa9.3□□□□□ -0.92
CHRNE-201ENST00000293780 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
CHRNE-201ENST00000293780 FAT1Q14517 4588 aa9.27□□□□□ -0.93
CHRNE-201ENST00000293780 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
CHRNE-201ENST00000293780 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
CHRNE-201ENST00000293780 PKHD1L1Q86WI1 4243 aa9.23□□□□□ -0.93
CHRNE-201ENST00000293780 RYR3Q15413 4870 aa9.22□□□□□ -0.93
CHRNE-201ENST00000293780 C9orf92A6NGG3 77 aa9.21□□□□□ -0.93
CHRNE-201ENST00000293780 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
CHRNE-201ENST00000293780 A0A1B0GVY2 172 aa9.18□□□□□ -0.94
CHRNE-201ENST00000293780 RPS29P62273 56 aaKnown RBP9.18□□□□□ -0.94
CHRNE-201ENST00000293780 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
CHRNE-201ENST00000293780 A8MUU9 505 aa9.1□□□□□ -0.95
CHRNE-201ENST00000293780 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
CHRNE-201ENST00000293780 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
CHRNE-201ENST00000293780 KRTAP10-4P60372 401 aaPredicted RBP9.08□□□□□ -0.96
CHRNE-201ENST00000293780 H0YAA0 97 aa8.96□□□□□ -0.97
CHRNE-201ENST00000293780 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
CHRNE-201ENST00000293780 LRP1Q07954 4544 aaKnown RBP8.93□□□□□ -0.98
CHRNE-201ENST00000293780 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
CHRNE-201ENST00000293780 TNXBP22105 4242 aa8.92□□□□□ -0.98
CHRNE-201ENST00000293780 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
CHRNE-201ENST00000293780 A0A1B0GU33 70 aa8.89□□□□□ -0.99
CHRNE-201ENST00000293780 H3BS24 57 aa8.88□□□□□ -0.99
CHRNE-201ENST00000293780 HSPG2P98160 4391 aa8.85□□□□□ -0.99
CHRNE-201ENST00000293780 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms