RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
A1CF-201ENST00000282641 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
A1CF-201ENST00000282641 CFAP54Q96N23 3096 aa4.35□□□□□ -1.71
A1CF-201ENST00000282641 ZFHX3Q15911 3703 aa4.34□□□□□ -1.71
A1CF-201ENST00000282641 PKD1L1Q8TDX9 2849 aa4.33□□□□□ -1.72
A1CF-201ENST00000282641 MGAQ8IWI9 3026 aa4.32□□□□□ -1.72
A1CF-201ENST00000282641 FRYQ5TBA9 3013 aa4.32□□□□□ -1.72
A1CF-201ENST00000282641 FRYLO94915 3013 aa4.31□□□□□ -1.72
A1CF-201ENST00000282641 DCHS2Q6V1P9 2916 aa4.31□□□□□ -1.72
A1CF-201ENST00000282641 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
A1CF-201ENST00000282641 ZZEF1O43149 2961 aa4.3□□□□□ -1.72
A1CF-201ENST00000282641 KRTAP10-1P60331 282 aa4.3□□□□□ -1.72
A1CF-201ENST00000282641 TNRC18O15417 2968 aaPredicted RBP4.28□□□□□ -1.72
A1CF-201ENST00000282641 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
A1CF-201ENST00000282641 FBN2P35556 2912 aa4.25□□□□□ -1.73
A1CF-201ENST00000282641 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
A1CF-201ENST00000282641 SRCAPQ6ZRS2 3230 aa4.21□□□□□ -1.74
A1CF-201ENST00000282641 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
A1CF-201ENST00000282641 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
A1CF-201ENST00000282641 KRTAP3-2Q9BYR7 98 aa4.16□□□□□ -1.74
A1CF-201ENST00000282641 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.74
A1CF-201ENST00000282641 DNAH12Q6ZR08 3092 aa4.08□□□□□ -1.76
A1CF-201ENST00000282641 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
A1CF-201ENST00000282641 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
A1CF-201ENST00000282641 KRTAP21-3Q3LHN1 58 aa4.05□□□□□ -1.76
A1CF-201ENST00000282641 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
A1CF-201ENST00000282641 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
A1CF-201ENST00000282641 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
A1CF-201ENST00000282641 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
A1CF-201ENST00000282641 COL12A1Q99715 3063 aa3.96□□□□□ -1.78
A1CF-201ENST00000282641 TRIOO75962 3097 aa3.94□□□□□ -1.78
A1CF-201ENST00000282641 OTOGQ6ZRI0 2925 aa3.92□□□□□ -1.78
A1CF-201ENST00000282641 M0R2T5 61 aa3.91□□□□□ -1.78
A1CF-201ENST00000282641 LAMA1P25391 3075 aa3.9□□□□□ -1.78
A1CF-201ENST00000282641 CEP350Q5VT06 3117 aa3.9□□□□□ -1.78
A1CF-201ENST00000282641 FBN1P35555 2871 aaKnown RBP3.89□□□□□ -1.79
A1CF-201ENST00000282641 HTTP42858 3142 aa3.89□□□□□ -1.79
A1CF-201ENST00000282641 VPS13AQ96RL7 3174 aa3.89□□□□□ -1.79
A1CF-201ENST00000282641 ATMQ13315 3056 aa3.87□□□□□ -1.79
A1CF-201ENST00000282641 ADGRG4Q8IZF6 3080 aa3.84□□□□□ -1.8
A1CF-201ENST00000282641 PRUNE2Q8WUY3 3088 aa3.84□□□□□ -1.8
A1CF-201ENST00000282641 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
A1CF-201ENST00000282641 DMXL1Q9Y485 3027 aa3.79□□□□□ -1.8
A1CF-201ENST00000282641 CELSR1Q9NYQ6 3014 aa3.78□□□□□ -1.8
A1CF-201ENST00000282641 A0A1B0GVY2 172 aa3.76□□□□□ -1.81
A1CF-201ENST00000282641 DMXL2Q8TDJ6 3036 aa3.75□□□□□ -1.81
A1CF-201ENST00000282641 PCNTO95613 3336 aa3.71□□□□□ -1.82
A1CF-201ENST00000282641 BOD1L1Q8NFC6 3051 aa3.7□□□□□ -1.82
A1CF-201ENST00000282641 C5orf42Q9H799 3197 aa3.69□□□□□ -1.82
A1CF-201ENST00000282641 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
A1CF-201ENST00000282641 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
A1CF-201ENST00000282641 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
A1CF-201ENST00000282641 LAMA2P24043 3122 aaKnown RBP3.66□□□□□ -1.82
A1CF-201ENST00000282641 RANBP2P49792 3224 aaKnown RBP3.63□□□□□ -1.83
A1CF-201ENST00000282641 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
A1CF-201ENST00000282641 WDFY4Q6ZS81 3184 aa3.62□□□□□ -1.83
A1CF-201ENST00000282641 AKAP9Q99996 3911 aa3.62□□□□□ -1.83
A1CF-201ENST00000282641 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
A1CF-201ENST00000282641 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
A1CF-201ENST00000282641 FREM2Q5SZK8 3169 aa3.6□□□□□ -1.83
A1CF-201ENST00000282641 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
A1CF-201ENST00000282641 ANK2Q01484 3957 aa3.52□□□□□ -1.85
A1CF-201ENST00000282641 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
A1CF-201ENST00000282641 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
A1CF-201ENST00000282641 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
A1CF-201ENST00000282641 NBPF19A0A087WUL8 3843 aa3.49□□□□□ -1.85
A1CF-201ENST00000282641 BSNQ9UPA5 3926 aa3.49□□□□□ -1.85
A1CF-201ENST00000282641 DNAH7Q8WXX0 4024 aa3.47□□□□□ -1.85
A1CF-201ENST00000282641 MT3P25713 68 aa3.47□□□□□ -1.85
A1CF-201ENST00000282641 LYSTQ99698 3801 aa3.46□□□□□ -1.86
A1CF-201ENST00000282641 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
A1CF-201ENST00000282641 GOLGB1Q14789 3259 aaKnown RBP3.42□□□□□ -1.86
A1CF-201ENST00000282641 MT1HL1P0DM35 61 aa3.42□□□□□ -1.86
A1CF-201ENST00000282641 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
A1CF-201ENST00000282641 REV3LO60673 3130 aa3.4□□□□□ -1.86
A1CF-201ENST00000282641 EYSQ5T1H1 3165 aa3.4□□□□□ -1.86
A1CF-201ENST00000282641 DNAH10Q8IVF4 4471 aa3.37□□□□□ -1.87
A1CF-201ENST00000282641 UTRNP46939 3433 aa3.35□□□□□ -1.87
A1CF-201ENST00000282641 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
A1CF-201ENST00000282641 SPTBN5Q9NRC6 3674 aaKnown RBP3.35□□□□□ -1.87
A1CF-201ENST00000282641 COL6A3P12111 3177 aa3.34□□□□□ -1.87
A1CF-201ENST00000282641 USP34Q70CQ2 3546 aa3.33□□□□□ -1.88
A1CF-201ENST00000282641 DNAH1Q9P2D7 4330 aa3.33□□□□□ -1.88
A1CF-201ENST00000282641 XIRP2A4UGR9 3374 aa3.31□□□□□ -1.88
A1CF-201ENST00000282641 MKI67P46013 3256 aaKnown RBP3.31□□□□□ -1.88
A1CF-201ENST00000282641 ZNF469Q96JG9 3925 aaPredicted RBP3.3□□□□□ -1.88
A1CF-201ENST00000282641 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
A1CF-201ENST00000282641 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
A1CF-201ENST00000282641 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
A1CF-201ENST00000282641 CUBNO60494 3623 aa3.28□□□□□ -1.88
A1CF-201ENST00000282641 SPENQ96T58 3664 aaKnown RBP3.27□□□□□ -1.89
A1CF-201ENST00000282641 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
A1CF-201ENST00000282641 CFAP47Q6ZTR5 3102 aa3.26□□□□□ -1.89
A1CF-201ENST00000282641 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
A1CF-201ENST00000282641 DNAH11Q96DT5 4516 aa3.23□□□□□ -1.89
A1CF-201ENST00000282641 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
A1CF-201ENST00000282641 SZT2Q5T011 3432 aa3.22□□□□□ -1.89
A1CF-201ENST00000282641 BRCA2P51587 3418 aa3.21□□□□□ -1.9
A1CF-201ENST00000282641 VPS13BQ7Z7G8 4022 aa3.2□□□□□ -1.9
A1CF-201ENST00000282641 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms