RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 OCR1Q9BZK8 76 aa11.15□□□□□ -0.62
C11orf49-201ENST00000278460 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
C11orf49-201ENST00000278460 CASC2Q6XLA1 102 aa11.14□□□□□ -0.63
C11orf49-201ENST00000278460 Q8N1X5 172 aa11.14□□□□□ -0.63
C11orf49-201ENST00000278460 KRTAP17-1Q9BYP8 105 aa11.14□□□□□ -0.63
C11orf49-201ENST00000278460 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
C11orf49-201ENST00000278460 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
C11orf49-201ENST00000278460 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
C11orf49-201ENST00000278460 hDV103S1A0JD37 113 aa11.09□□□□□ -0.63
C11orf49-201ENST00000278460 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
C11orf49-201ENST00000278460 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
C11orf49-201ENST00000278460 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
C11orf49-201ENST00000278460 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.64
C11orf49-201ENST00000278460 TNXBP22105 4242 aa11.01□□□□□ -0.65
C11orf49-201ENST00000278460 MRPL34Q9BQ48 92 aaKnown RBP11□□□□□ -0.65
C11orf49-201ENST00000278460 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
C11orf49-201ENST00000278460 C20orf197Q8N268 126 aa10.99□□□□□ -0.65
C11orf49-201ENST00000278460 LINC00313P59037 77 aa10.98□□□□□ -0.65
C11orf49-201ENST00000278460 FLG2Q5D862 2391 aaPredicted RBP10.98□□□□□ -0.65
C11orf49-201ENST00000278460 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
C11orf49-201ENST00000278460 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
C11orf49-201ENST00000278460 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
C11orf49-201ENST00000278460 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
C11orf49-201ENST00000278460 CYSTM1Q9H1C7 97 aa10.91□□□□□ -0.66
C11orf49-201ENST00000278460 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
C11orf49-201ENST00000278460 SNURFQ9Y675 71 aa10.9□□□□□ -0.66
C11orf49-201ENST00000278460 NDUFS5O43920 106 aa10.89□□□□□ -0.67
C11orf49-201ENST00000278460 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
C11orf49-201ENST00000278460 MT1HL1P0DM35 61 aa10.87□□□□□ -0.67
C11orf49-201ENST00000278460 MP68P56378 58 aa10.86□□□□□ -0.67
C11orf49-201ENST00000278460 H0Y9P7 68 aa10.85□□□□□ -0.67
C11orf49-201ENST00000278460 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
C11orf49-201ENST00000278460 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
C11orf49-201ENST00000278460 OXTP01178 125 aa10.84□□□□□ -0.67
C11orf49-201ENST00000278460 H3BPC8 53 aa10.83□□□□□ -0.68
C11orf49-201ENST00000278460 NDUFC1O43677 76 aa10.83□□□□□ -0.68
C11orf49-201ENST00000278460 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
C11orf49-201ENST00000278460 RETNLBQ9BQ08 111 aa10.83□□□□□ -0.68
C11orf49-201ENST00000278460 KRTAP4-5Q9BYR2 181 aa10.82□□□□□ -0.68
C11orf49-201ENST00000278460 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
C11orf49-201ENST00000278460 H7BZZ5 65 aa10.8□□□□□ -0.68
C11orf49-201ENST00000278460 LINC00208Q96KT6 92 aa10.78□□□□□ -0.68
C11orf49-201ENST00000278460 TMEM258P61165 79 aa10.77□□□□□ -0.68
C11orf49-201ENST00000278460 BIRC6Q9NR09 4857 aa10.77□□□□□ -0.69
C11orf49-201ENST00000278460 MYCBP2O75592 4640 aa10.77□□□□□ -0.69
C11orf49-201ENST00000278460 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
C11orf49-201ENST00000278460 KRTAP13-3Q3SY46 172 aa10.73□□□□□ -0.69
C11orf49-201ENST00000278460 Q5W150 140 aa10.73□□□□□ -0.69
C11orf49-201ENST00000278460 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
C11orf49-201ENST00000278460 C9orf92A6NGG3 77 aa10.7□□□□□ -0.7
C11orf49-201ENST00000278460 HERC2O95714 4834 aa10.67□□□□□ -0.7
C11orf49-201ENST00000278460 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
C11orf49-201ENST00000278460 A8MUU9 505 aa10.65□□□□□ -0.7
C11orf49-201ENST00000278460 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
C11orf49-201ENST00000278460 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
C11orf49-201ENST00000278460 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
C11orf49-201ENST00000278460 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
C11orf49-201ENST00000278460 ATP5EP56381 51 aaPredicted RBP10.61□□□□□ -0.71
C11orf49-201ENST00000278460 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
C11orf49-201ENST00000278460 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
C11orf49-201ENST00000278460 Q75L30 129 aa10.55□□□□□ -0.72
C11orf49-201ENST00000278460 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
C11orf49-201ENST00000278460 SPANXA2-OT1Q8N9U9 137 aa10.54□□□□□ -0.72
C11orf49-201ENST00000278460 PCOTHQ58A44 107 aa10.53□□□□□ -0.72
C11orf49-201ENST00000278460 PRR4Q16378 134 aa10.51□□□□□ -0.73
C11orf49-201ENST00000278460 J3QL48 77 aa10.5□□□□□ -0.73
C11orf49-201ENST00000278460 XP32Q5T750 250 aa10.46□□□□□ -0.74
C11orf49-201ENST00000278460 RPS28P62857 69 aaKnown RBP10.45□□□□□ -0.74
C11orf49-201ENST00000278460 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
C11orf49-201ENST00000278460 SERP1Q9Y6X1 66 aa10.44□□□□□ -0.74
C11orf49-201ENST00000278460 TPRXLQ17RH7 258 aa10.44□□□□□ -0.74
C11orf49-201ENST00000278460 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
C11orf49-201ENST00000278460 C7orf65Q6ZTY9 151 aa10.42□□□□□ -0.74
C11orf49-201ENST00000278460 HRES1P13985 223 aa10.38□□□□□ -0.75
C11orf49-201ENST00000278460 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
C11orf49-201ENST00000278460 SPINK7P58062 85 aa10.29□□□□□ -0.76
C11orf49-201ENST00000278460 DMAC1Q96GE9 116 aa10.25□□□□□ -0.77
C11orf49-201ENST00000278460 ACYP2P14621 99 aa10.2□□□□□ -0.78
C11orf49-201ENST00000278460 COA5Q86WW8 74 aa10.2□□□□□ -0.78
C11orf49-201ENST00000278460 LPAP08519 4548 aa10.2□□□□□ -0.78
C11orf49-201ENST00000278460 LRP2P98164 4655 aa10.18□□□□□ -0.78
C11orf49-201ENST00000278460 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
C11orf49-201ENST00000278460 C4orf26Q17RF5 130 aa10.16□□□□□ -0.78
C11orf49-201ENST00000278460 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
C11orf49-201ENST00000278460 A8MUN3 132 aa10.13□□□□□ -0.79
C11orf49-201ENST00000278460 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
C11orf49-201ENST00000278460 COX6B2Q6YFQ2 88 aa10.07□□□□□ -0.8
C11orf49-201ENST00000278460 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
C11orf49-201ENST00000278460 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
C11orf49-201ENST00000278460 Q1T7F1 81 aa9.96□□□□□ -0.81
C11orf49-201ENST00000278460 MUC17Q685J3 4493 aa9.96□□□□□ -0.81
C11orf49-201ENST00000278460 MPLKIPQ8TAP9 179 aa9.96□□□□□ -0.82
C11orf49-201ENST00000278460 HERC1Q15751 4861 aa9.93□□□□□ -0.82
C11orf49-201ENST00000278460 V9GYY9 64 aa9.93□□□□□ -0.82
C11orf49-201ENST00000278460 HMCN2Q8NDA2 5059 aa9.88□□□□□ -0.83
C11orf49-201ENST00000278460 RBM12B-AS1Q9P1G2 102 aa9.86□□□□□ -0.83
C11orf49-201ENST00000278460 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
C11orf49-201ENST00000278460 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
C11orf49-201ENST00000278460 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
C11orf49-201ENST00000278460 H1FX-AS1Q4G0G2 97 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms