RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
TMEM47-201ENST00000275954 SPRR1BP22528 89 aa8.67□□□□□ -1.02
TMEM47-201ENST00000275954 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
TMEM47-201ENST00000275954 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
TMEM47-201ENST00000275954 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
TMEM47-201ENST00000275954 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
TMEM47-201ENST00000275954 Q5XG85 94 aa8.62□□□□□ -1.03
TMEM47-201ENST00000275954 Q6ZR54 194 aa8.62□□□□□ -1.03
TMEM47-201ENST00000275954 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
TMEM47-201ENST00000275954 K7ERS5 55 aa8.57□□□□□ -1.04
TMEM47-201ENST00000275954 Q8N9P0 234 aaPredicted RBP8.57□□□□□ -1.04
TMEM47-201ENST00000275954 SPANXA2-OT1Q8N9U9 137 aa8.57□□□□□ -1.04
TMEM47-201ENST00000275954 Q8N1X5 172 aa8.56□□□□□ -1.04
TMEM47-201ENST00000275954 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
TMEM47-201ENST00000275954 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
TMEM47-201ENST00000275954 CD164Q04900 197 aa8.52□□□□□ -1.05
TMEM47-201ENST00000275954 A0A087X002 238 aa8.52□□□□□ -1.05
TMEM47-201ENST00000275954 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
TMEM47-201ENST00000275954 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
TMEM47-201ENST00000275954 Q5VSD8 79 aa8.5□□□□□ -1.05
TMEM47-201ENST00000275954 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
TMEM47-201ENST00000275954 HRES1P13985 223 aa8.49□□□□□ -1.05
TMEM47-201ENST00000275954 Q1T7F1 81 aa8.44□□□□□ -1.06
TMEM47-201ENST00000275954 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
TMEM47-201ENST00000275954 Q5W150 140 aa8.4□□□□□ -1.07
TMEM47-201ENST00000275954 ZCCHC13Q8WW36 166 aaKnown RBP8.4□□□□□ -1.07
TMEM47-201ENST00000275954 UQCR11O14957 56 aa8.39□□□□□ -1.07
TMEM47-201ENST00000275954 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
TMEM47-201ENST00000275954 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
TMEM47-201ENST00000275954 Q5VV11 94 aa8.32□□□□□ -1.08
TMEM47-201ENST00000275954 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
TMEM47-201ENST00000275954 CDC42SE1Q9NRR8 79 aa8.27□□□□□ -1.09
TMEM47-201ENST00000275954 SPINK7P58062 85 aa8.26□□□□□ -1.09
TMEM47-201ENST00000275954 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
TMEM47-201ENST00000275954 Q75L30 129 aa8.23□□□□□ -1.09
TMEM47-201ENST00000275954 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
TMEM47-201ENST00000275954 A0A0D9SG42 100 aa8.18□□□□□ -1.1
TMEM47-201ENST00000275954 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
TMEM47-201ENST00000275954 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
TMEM47-201ENST00000275954 A8MU10 97 aa8.15□□□□□ -1.1
TMEM47-201ENST00000275954 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
TMEM47-201ENST00000275954 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
TMEM47-201ENST00000275954 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
TMEM47-201ENST00000275954 A0A1B0GU33 70 aa8.08□□□□□ -1.12
TMEM47-201ENST00000275954 LCA10Q71F78 164 aa8.08□□□□□ -1.12
TMEM47-201ENST00000275954 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
TMEM47-201ENST00000275954 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
TMEM47-201ENST00000275954 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
TMEM47-201ENST00000275954 DNAH9Q9NYC9 4486 aa8.04□□□□□ -1.12
TMEM47-201ENST00000275954 ANK2Q01484 3957 aa8.03□□□□□ -1.12
TMEM47-201ENST00000275954 Q6ZSA8 131 aa8.03□□□□□ -1.12
TMEM47-201ENST00000275954 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
TMEM47-201ENST00000275954 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
TMEM47-201ENST00000275954 PLECQ15149 4684 aaKnown RBP7.99□□□□□ -1.13
TMEM47-201ENST00000275954 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
TMEM47-201ENST00000275954 M0R2T5 61 aa7.91□□□□□ -1.14
TMEM47-201ENST00000275954 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
TMEM47-201ENST00000275954 STARD9Q9P2P6 4700 aa7.89□□□□□ -1.15
TMEM47-201ENST00000275954 S4R3F8 94 aa7.87□□□□□ -1.15
TMEM47-201ENST00000275954 DNAH10Q8IVF4 4471 aa7.86□□□□□ -1.15
TMEM47-201ENST00000275954 A0A1B0GVY2 172 aa7.86□□□□□ -1.15
TMEM47-201ENST00000275954 LYSTQ99698 3801 aa7.84□□□□□ -1.15
TMEM47-201ENST00000275954 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
TMEM47-201ENST00000275954 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
TMEM47-201ENST00000275954 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
TMEM47-201ENST00000275954 H3BS24 57 aa7.81□□□□□ -1.16
TMEM47-201ENST00000275954 H1FX-AS1Q4G0G2 97 aa7.78□□□□□ -1.16
TMEM47-201ENST00000275954 FAT1Q14517 4588 aa7.77□□□□□ -1.17
TMEM47-201ENST00000275954 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
TMEM47-201ENST00000275954 KMT2AQ03164 3969 aa7.76□□□□□ -1.17
TMEM47-201ENST00000275954 KRTAP16-1A8MUX0 517 aa7.76□□□□□ -1.17
TMEM47-201ENST00000275954 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
TMEM47-201ENST00000275954 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
TMEM47-201ENST00000275954 DNAH5Q8TE73 4624 aa7.74□□□□□ -1.17
TMEM47-201ENST00000275954 A6NN06 94 aa7.73□□□□□ -1.17
TMEM47-201ENST00000275954 A8MUU9 505 aa7.73□□□□□ -1.17
TMEM47-201ENST00000275954 HYDINQ4G0P3 5121 aa7.72□□□□□ -1.17
TMEM47-201ENST00000275954 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.17
TMEM47-201ENST00000275954 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
TMEM47-201ENST00000275954 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
TMEM47-201ENST00000275954 R4GN34 69 aa7.67□□□□□ -1.18
TMEM47-201ENST00000275954 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
TMEM47-201ENST00000275954 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
TMEM47-201ENST00000275954 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
TMEM47-201ENST00000275954 RYR1P21817 5038 aa7.61□□□□□ -1.19
TMEM47-201ENST00000275954 KMT2CQ8NEZ4 4911 aaKnown RBP7.6□□□□□ -1.19
TMEM47-201ENST00000275954 M0QZ58 72 aa7.6□□□□□ -1.19
TMEM47-201ENST00000275954 XP32Q5T750 250 aa7.57□□□□□ -1.2
TMEM47-201ENST00000275954 RYR3Q15413 4870 aa7.56□□□□□ -1.2
TMEM47-201ENST00000275954 ROMO1P60602 79 aa7.53□□□□□ -1.2
TMEM47-201ENST00000275954 CMYA5Q8N3K9 4069 aa7.53□□□□□ -1.2
TMEM47-201ENST00000275954 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
TMEM47-201ENST00000275954 DYNC1H1Q14204 4646 aaKnown RBP7.51□□□□□ -1.21
TMEM47-201ENST00000275954 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
TMEM47-201ENST00000275954 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
TMEM47-201ENST00000275954 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.21
TMEM47-201ENST00000275954 KRTAP10-8P60410 259 aa7.46□□□□□ -1.21
TMEM47-201ENST00000275954 H0YAA0 97 aa7.46□□□□□ -1.22
TMEM47-201ENST00000275954 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
TMEM47-201ENST00000275954 DNAH8Q96JB1 4490 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms