RNA–Protein interactions for RNA: ENST00000270792.9

SH3BGRL3-201, Transcript of SH3 domain binding glutamate rich protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3BGRL3, Length 1,661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRL3-201ENST00000270792 A8MWP4 228 aa11.67□□□□□ -0.54
SH3BGRL3-201ENST00000270792 SPAG11AQ6PDA7 123 aa11.67□□□□□ -0.54
SH3BGRL3-201ENST00000270792 HERC1Q15751 4861 aa11.65□□□□□ -0.54
SH3BGRL3-201ENST00000270792 RPS29P62273 56 aaKnown RBP11.64□□□□□ -0.55
SH3BGRL3-201ENST00000270792 PRR15Q8IV56 129 aa11.62□□□□□ -0.55
SH3BGRL3-201ENST00000270792 NDUFB1O75438 58 aa11.62□□□□□ -0.55
SH3BGRL3-201ENST00000270792 PCP4P48539 62 aa11.62□□□□□ -0.55
SH3BGRL3-201ENST00000270792 ATOX1O00244 68 aa11.61□□□□□ -0.55
SH3BGRL3-201ENST00000270792 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
SH3BGRL3-201ENST00000270792 C1orf195Q5TG92 126 aa11.58□□□□□ -0.56
SH3BGRL3-201ENST00000270792 HCG22E2RYF7 251 aa11.56□□□□□ -0.56
SH3BGRL3-201ENST00000270792 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
SH3BGRL3-201ENST00000270792 RETNLBQ9BQ08 111 aa11.52□□□□□ -0.57
SH3BGRL3-201ENST00000270792 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
SH3BGRL3-201ENST00000270792 MMP24-AS1A0A0U1RRL7 71 aa11.49□□□□□ -0.57
SH3BGRL3-201ENST00000270792 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
SH3BGRL3-201ENST00000270792 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
SH3BGRL3-201ENST00000270792 C8orf17Q9NRJ1 99 aa11.48□□□□□ -0.57
SH3BGRL3-201ENST00000270792 CASC2Q6XLA1 102 aa11.47□□□□□ -0.57
SH3BGRL3-201ENST00000270792 SERP2Q8N6R1 65 aa11.45□□□□□ -0.58
SH3BGRL3-201ENST00000270792 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
SH3BGRL3-201ENST00000270792 hDV103S1A0JD37 113 aa11.43□□□□□ -0.58
SH3BGRL3-201ENST00000270792 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
SH3BGRL3-201ENST00000270792 COX7CP15954 63 aa11.4□□□□□ -0.58
SH3BGRL3-201ENST00000270792 OCR1Q9BZK8 76 aa11.4□□□□□ -0.58
SH3BGRL3-201ENST00000270792 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.59
SH3BGRL3-201ENST00000270792 PRR4Q16378 134 aa11.39□□□□□ -0.59
SH3BGRL3-201ENST00000270792 TMEM254Q8TBM7 123 aa11.37□□□□□ -0.59
SH3BGRL3-201ENST00000270792 HMCN2Q8NDA2 5059 aa11.36□□□□□ -0.59
SH3BGRL3-201ENST00000270792 UQCRQO14949 82 aa11.36□□□□□ -0.59
SH3BGRL3-201ENST00000270792 LINC00313P59037 77 aa11.36□□□□□ -0.59
SH3BGRL3-201ENST00000270792 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
SH3BGRL3-201ENST00000270792 CCDC179H3BU77 68 aa11.33□□□□□ -0.6
SH3BGRL3-201ENST00000270792 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
SH3BGRL3-201ENST00000270792 FP248Q71RG6 208 aaPredicted RBP11.27□□□□□ -0.61
SH3BGRL3-201ENST00000270792 LPAP08519 4548 aa11.26□□□□□ -0.61
SH3BGRL3-201ENST00000270792 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
SH3BGRL3-201ENST00000270792 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
SH3BGRL3-201ENST00000270792 NDUFS5O43920 106 aa11.24□□□□□ -0.61
SH3BGRL3-201ENST00000270792 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
SH3BGRL3-201ENST00000270792 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
SH3BGRL3-201ENST00000270792 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
SH3BGRL3-201ENST00000270792 LRP2P98164 4655 aa11.2□□□□□ -0.62
SH3BGRL3-201ENST00000270792 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
SH3BGRL3-201ENST00000270792 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
SH3BGRL3-201ENST00000270792 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 C9orf92A6NGG3 77 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 MP68P56378 58 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 A0A0U1RQV1 116 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 H0Y9P7 68 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
SH3BGRL3-201ENST00000270792 SNURFQ9Y675 71 aa11.13□□□□□ -0.63
SH3BGRL3-201ENST00000270792 H3BPC8 53 aa11.09□□□□□ -0.63
SH3BGRL3-201ENST00000270792 CYSTM1Q9H1C7 97 aa11.09□□□□□ -0.63
SH3BGRL3-201ENST00000270792 ZCCHC13Q8WW36 166 aaKnown RBP11.06□□□□□ -0.64
SH3BGRL3-201ENST00000270792 LINC00208Q96KT6 92 aa11.06□□□□□ -0.64
SH3BGRL3-201ENST00000270792 Q5W150 140 aa11.05□□□□□ -0.64
SH3BGRL3-201ENST00000270792 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
SH3BGRL3-201ENST00000270792 A8MUU9 505 aa11.04□□□□□ -0.64
SH3BGRL3-201ENST00000270792 NDUFC1O43677 76 aa11.02□□□□□ -0.64
SH3BGRL3-201ENST00000270792 C1orf64Q8NEQ6 169 aa11.02□□□□□ -0.64
SH3BGRL3-201ENST00000270792 XP32Q5T750 250 aa11.01□□□□□ -0.65
SH3BGRL3-201ENST00000270792 H7BZZ5 65 aa10.99□□□□□ -0.65
SH3BGRL3-201ENST00000270792 UBR4Q5T4S7 5183 aa10.98□□□□□ -0.65
SH3BGRL3-201ENST00000270792 Q75L30 129 aa10.95□□□□□ -0.66
SH3BGRL3-201ENST00000270792 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
SH3BGRL3-201ENST00000270792 TMEM258P61165 79 aa10.93□□□□□ -0.66
SH3BGRL3-201ENST00000270792 IGKV2-30P06310 120 aa10.87□□□□□ -0.67
SH3BGRL3-201ENST00000270792 RPL37P61927 97 aaKnown RBP10.85□□□□□ -0.67
SH3BGRL3-201ENST00000270792 CYP4F30PQ9H0H9 118 aa10.85□□□□□ -0.67
SH3BGRL3-201ENST00000270792 MUC17Q685J3 4493 aa10.83□□□□□ -0.68
SH3BGRL3-201ENST00000270792 FAM236DA0A1B0GTK5 79 aa10.82□□□□□ -0.68
SH3BGRL3-201ENST00000270792 FAM236CP0DP71 79 aa10.82□□□□□ -0.68
SH3BGRL3-201ENST00000270792 PCOTHQ58A44 107 aa10.82□□□□□ -0.68
SH3BGRL3-201ENST00000270792 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
SH3BGRL3-201ENST00000270792 ATP5EP56381 51 aaPredicted RBP10.79□□□□□ -0.68
SH3BGRL3-201ENST00000270792 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
SH3BGRL3-201ENST00000270792 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.69
SH3BGRL3-201ENST00000270792 SPANXA2-OT1Q8N9U9 137 aa10.77□□□□□ -0.69
SH3BGRL3-201ENST00000270792 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
SH3BGRL3-201ENST00000270792 RNF213Q63HN8 5207 aa10.74□□□□□ -0.69
SH3BGRL3-201ENST00000270792 MUC2Q02817 5179 aa10.71□□□□□ -0.69
SH3BGRL3-201ENST00000270792 HRES1P13985 223 aa10.69□□□□□ -0.7
SH3BGRL3-201ENST00000270792 KRTAP4-1Q9BYQ7 146 aa10.67□□□□□ -0.7
SH3BGRL3-201ENST00000270792 SPINK7P58062 85 aa10.66□□□□□ -0.7
SH3BGRL3-201ENST00000270792 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
SH3BGRL3-201ENST00000270792 RPS28P62857 69 aaKnown RBP10.55□□□□□ -0.72
SH3BGRL3-201ENST00000270792 DMAC1Q96GE9 116 aa10.53□□□□□ -0.72
SH3BGRL3-201ENST00000270792 C4orf26Q17RF5 130 aa10.5□□□□□ -0.73
SH3BGRL3-201ENST00000270792 ACYP2P14621 99 aa10.46□□□□□ -0.74
SH3BGRL3-201ENST00000270792 A8MUN3 132 aa10.44□□□□□ -0.74
SH3BGRL3-201ENST00000270792 COA5Q86WW8 74 aa10.44□□□□□ -0.74
SH3BGRL3-201ENST00000270792 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
SH3BGRL3-201ENST00000270792 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
SH3BGRL3-201ENST00000270792 FAT4Q6V0I7 4981 aa10.34□□□□□ -0.75
SH3BGRL3-201ENST00000270792 MPLKIPQ8TAP9 179 aa10.31□□□□□ -0.76
SH3BGRL3-201ENST00000270792 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
SH3BGRL3-201ENST00000270792 KRTAP19-2Q3LHN2 52 aa10.31□□□□□ -0.76
SH3BGRL3-201ENST00000270792 CHKB-CPT1BH3BT56 60 aa10.29□□□□□ -0.76
SH3BGRL3-201ENST00000270792 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms