RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
TPM1-201ENST00000267996 COX7CP15954 63 aa9.33□□□□□ -0.92
TPM1-201ENST00000267996 FAT3Q8TDW7 4589 aa9.32□□□□□ -0.92
TPM1-201ENST00000267996 LRP1Q07954 4544 aaKnown RBP9.32□□□□□ -0.92
TPM1-201ENST00000267996 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
TPM1-201ENST00000267996 OCR1Q9BZK8 76 aa9.32□□□□□ -0.92
TPM1-201ENST00000267996 WFDC13Q8IUB5 93 aa9.31□□□□□ -0.92
TPM1-201ENST00000267996 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
TPM1-201ENST00000267996 UQCRQO14949 82 aa9.3□□□□□ -0.92
TPM1-201ENST00000267996 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
TPM1-201ENST00000267996 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
TPM1-201ENST00000267996 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
TPM1-201ENST00000267996 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
TPM1-201ENST00000267996 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
TPM1-201ENST00000267996 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
TPM1-201ENST00000267996 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
TPM1-201ENST00000267996 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
TPM1-201ENST00000267996 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
TPM1-201ENST00000267996 LINC00313P59037 77 aa9.18□□□□□ -0.94
TPM1-201ENST00000267996 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
TPM1-201ENST00000267996 MT1HL1P0DM35 61 aa9.17□□□□□ -0.94
TPM1-201ENST00000267996 MYCBP2O75592 4640 aa9.16□□□□□ -0.94
TPM1-201ENST00000267996 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
TPM1-201ENST00000267996 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
TPM1-201ENST00000267996 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
TPM1-201ENST00000267996 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
TPM1-201ENST00000267996 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
TPM1-201ENST00000267996 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
TPM1-201ENST00000267996 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
TPM1-201ENST00000267996 OXTP01178 125 aa9.12□□□□□ -0.95
TPM1-201ENST00000267996 CYSTM1Q9H1C7 97 aa9.12□□□□□ -0.95
TPM1-201ENST00000267996 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
TPM1-201ENST00000267996 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
TPM1-201ENST00000267996 HERC2O95714 4834 aa9.1□□□□□ -0.95
TPM1-201ENST00000267996 Q8N9P0 234 aaPredicted RBP9.1□□□□□ -0.95
TPM1-201ENST00000267996 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
TPM1-201ENST00000267996 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
TPM1-201ENST00000267996 NDUFS5O43920 106 aa9.07□□□□□ -0.96
TPM1-201ENST00000267996 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
TPM1-201ENST00000267996 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
TPM1-201ENST00000267996 H0Y9P7 68 aa9.04□□□□□ -0.96
TPM1-201ENST00000267996 MP68P56378 58 aa9.04□□□□□ -0.96
TPM1-201ENST00000267996 H3BPC8 53 aa9.03□□□□□ -0.96
TPM1-201ENST00000267996 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
TPM1-201ENST00000267996 NDUFC1O43677 76 aa9.01□□□□□ -0.97
TPM1-201ENST00000267996 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
TPM1-201ENST00000267996 H7BZZ5 65 aa9□□□□□ -0.97
TPM1-201ENST00000267996 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
TPM1-201ENST00000267996 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
TPM1-201ENST00000267996 Q5W150 140 aa8.98□□□□□ -0.97
TPM1-201ENST00000267996 C9orf92A6NGG3 77 aa8.96□□□□□ -0.98
TPM1-201ENST00000267996 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.98
TPM1-201ENST00000267996 TMEM258P61165 79 aa8.95□□□□□ -0.98
TPM1-201ENST00000267996 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TPM1-201ENST00000267996 A8MUU9 505 aa8.94□□□□□ -0.98
TPM1-201ENST00000267996 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
TPM1-201ENST00000267996 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
TPM1-201ENST00000267996 Q75L30 129 aa8.85□□□□□ -0.99
TPM1-201ENST00000267996 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
TPM1-201ENST00000267996 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
TPM1-201ENST00000267996 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
TPM1-201ENST00000267996 IGKV2-30P06310 120 aa8.82□□□□□ -1
TPM1-201ENST00000267996 J3QL48 77 aa8.81□□□□□ -1
TPM1-201ENST00000267996 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
TPM1-201ENST00000267996 PRR4Q16378 134 aa8.81□□□□□ -1
TPM1-201ENST00000267996 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
TPM1-201ENST00000267996 XP32Q5T750 250 aa8.78□□□□□ -1
TPM1-201ENST00000267996 PCOTHQ58A44 107 aa8.78□□□□□ -1
TPM1-201ENST00000267996 TPRXLQ17RH7 258 aa8.77□□□□□ -1.01
TPM1-201ENST00000267996 RPL37P61927 97 aaKnown RBP8.75□□□□□ -1.01
TPM1-201ENST00000267996 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
TPM1-201ENST00000267996 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
TPM1-201ENST00000267996 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
TPM1-201ENST00000267996 HRES1P13985 223 aa8.68□□□□□ -1.02
TPM1-201ENST00000267996 ATP11AUNQ6ZP68 121 aa8.68□□□□□ -1.02
TPM1-201ENST00000267996 SERP1Q9Y6X1 66 aa8.68□□□□□ -1.02
TPM1-201ENST00000267996 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
TPM1-201ENST00000267996 LPAP08519 4548 aa8.63□□□□□ -1.03
TPM1-201ENST00000267996 SPINK7P58062 85 aa8.62□□□□□ -1.03
TPM1-201ENST00000267996 LRP2P98164 4655 aa8.62□□□□□ -1.03
TPM1-201ENST00000267996 DMAC1Q96GE9 116 aa8.56□□□□□ -1.04
TPM1-201ENST00000267996 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
TPM1-201ENST00000267996 COA5Q86WW8 74 aa8.5□□□□□ -1.05
TPM1-201ENST00000267996 ACYP2P14621 99 aa8.49□□□□□ -1.05
TPM1-201ENST00000267996 HERC1Q15751 4861 aa8.49□□□□□ -1.05
TPM1-201ENST00000267996 A8MUN3 132 aa8.46□□□□□ -1.05
TPM1-201ENST00000267996 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
TPM1-201ENST00000267996 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
TPM1-201ENST00000267996 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
TPM1-201ENST00000267996 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
TPM1-201ENST00000267996 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
TPM1-201ENST00000267996 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
TPM1-201ENST00000267996 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.07
TPM1-201ENST00000267996 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.07
TPM1-201ENST00000267996 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
TPM1-201ENST00000267996 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
TPM1-201ENST00000267996 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
TPM1-201ENST00000267996 Q1T7F1 81 aa8.29□□□□□ -1.08
TPM1-201ENST00000267996 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
TPM1-201ENST00000267996 V9GYY9 64 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms