RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SPINK1P00995 79 aa6.64□□□□□ -1.35
SCAF11-201ENST00000266589 RYR1P21817 5038 aa6.64□□□□□ -1.35
SCAF11-201ENST00000266589 HSPG2P98160 4391 aa6.63□□□□□ -1.35
SCAF11-201ENST00000266589 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
SCAF11-201ENST00000266589 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
SCAF11-201ENST00000266589 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
SCAF11-201ENST00000266589 hDV103S1A0JD37 113 aa6.62□□□□□ -1.35
SCAF11-201ENST00000266589 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
SCAF11-201ENST00000266589 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
SCAF11-201ENST00000266589 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
SCAF11-201ENST00000266589 SEC61GP60059 68 aa6.6□□□□□ -1.35
SCAF11-201ENST00000266589 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
SCAF11-201ENST00000266589 RPS29P62273 56 aaKnown RBP6.59□□□□□ -1.35
SCAF11-201ENST00000266589 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
SCAF11-201ENST00000266589 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
SCAF11-201ENST00000266589 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
SCAF11-201ENST00000266589 BIRC6Q9NR09 4857 aa6.58□□□□□ -1.36
SCAF11-201ENST00000266589 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
SCAF11-201ENST00000266589 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
SCAF11-201ENST00000266589 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
SCAF11-201ENST00000266589 Q8N1X5 172 aa6.56□□□□□ -1.36
SCAF11-201ENST00000266589 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
SCAF11-201ENST00000266589 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
SCAF11-201ENST00000266589 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
SCAF11-201ENST00000266589 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
SCAF11-201ENST00000266589 NDUFS5O43920 106 aa6.53□□□□□ -1.36
SCAF11-201ENST00000266589 LINC00313P59037 77 aa6.52□□□□□ -1.37
SCAF11-201ENST00000266589 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
SCAF11-201ENST00000266589 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
SCAF11-201ENST00000266589 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
SCAF11-201ENST00000266589 H0Y9P7 68 aa6.49□□□□□ -1.37
SCAF11-201ENST00000266589 MP68P56378 58 aa6.49□□□□□ -1.37
SCAF11-201ENST00000266589 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
SCAF11-201ENST00000266589 H7BZZ5 65 aa6.48□□□□□ -1.37
SCAF11-201ENST00000266589 V9GYY9 64 aa6.48□□□□□ -1.37
SCAF11-201ENST00000266589 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
SCAF11-201ENST00000266589 TMEM258P61165 79 aa6.47□□□□□ -1.37
SCAF11-201ENST00000266589 NDUFC1O43677 76 aa6.46□□□□□ -1.37
SCAF11-201ENST00000266589 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.38
SCAF11-201ENST00000266589 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
SCAF11-201ENST00000266589 LINC00208Q96KT6 92 aa6.46□□□□□ -1.38
SCAF11-201ENST00000266589 RETNLBQ9BQ08 111 aa6.46□□□□□ -1.38
SCAF11-201ENST00000266589 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
SCAF11-201ENST00000266589 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
SCAF11-201ENST00000266589 TNXBP22105 4242 aa6.45□□□□□ -1.38
SCAF11-201ENST00000266589 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
SCAF11-201ENST00000266589 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-201ENST00000266589 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-201ENST00000266589 H3BPC8 53 aa6.43□□□□□ -1.38
SCAF11-201ENST00000266589 C4orf26Q17RF5 130 aa6.43□□□□□ -1.38
SCAF11-201ENST00000266589 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
SCAF11-201ENST00000266589 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
SCAF11-201ENST00000266589 FAM236DA0A1B0GTK5 79 aa6.4□□□□□ -1.38
SCAF11-201ENST00000266589 FAM236CP0DP71 79 aa6.4□□□□□ -1.38
SCAF11-201ENST00000266589 Q5W150 140 aa6.4□□□□□ -1.38
SCAF11-201ENST00000266589 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
SCAF11-201ENST00000266589 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
SCAF11-201ENST00000266589 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SCAF11-201ENST00000266589 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
SCAF11-201ENST00000266589 OXTP01178 125 aa6.35□□□□□ -1.39
SCAF11-201ENST00000266589 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-201ENST00000266589 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
SCAF11-201ENST00000266589 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
SCAF11-201ENST00000266589 HERC2O95714 4834 aa6.33□□□□□ -1.4
SCAF11-201ENST00000266589 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
SCAF11-201ENST00000266589 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
SCAF11-201ENST00000266589 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-201ENST00000266589 A8MUU9 505 aa6.3□□□□□ -1.4
SCAF11-201ENST00000266589 PRR4Q16378 134 aa6.29□□□□□ -1.4
SCAF11-201ENST00000266589 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
SCAF11-201ENST00000266589 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
SCAF11-201ENST00000266589 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
SCAF11-201ENST00000266589 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
SCAF11-201ENST00000266589 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
SCAF11-201ENST00000266589 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
SCAF11-201ENST00000266589 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
SCAF11-201ENST00000266589 Q75L30 129 aa6.24□□□□□ -1.41
SCAF11-201ENST00000266589 HRES1P13985 223 aa6.2□□□□□ -1.42
SCAF11-201ENST00000266589 XP32Q5T750 250 aa6.2□□□□□ -1.42
SCAF11-201ENST00000266589 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
SCAF11-201ENST00000266589 J3QL48 77 aa6.19□□□□□ -1.42
SCAF11-201ENST00000266589 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
SCAF11-201ENST00000266589 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
SCAF11-201ENST00000266589 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
SCAF11-201ENST00000266589 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
SCAF11-201ENST00000266589 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
SCAF11-201ENST00000266589 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
SCAF11-201ENST00000266589 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
SCAF11-201ENST00000266589 SPINK7P58062 85 aa6.12□□□□□ -1.43
SCAF11-201ENST00000266589 COA5Q86WW8 74 aa6.11□□□□□ -1.43
SCAF11-201ENST00000266589 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
SCAF11-201ENST00000266589 ACYP2P14621 99 aa6.08□□□□□ -1.44
SCAF11-201ENST00000266589 LPAP08519 4548 aa6.04□□□□□ -1.44
SCAF11-201ENST00000266589 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
SCAF11-201ENST00000266589 A8MUN3 132 aa6.01□□□□□ -1.45
SCAF11-201ENST00000266589 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
SCAF11-201ENST00000266589 LRP2P98164 4655 aa6□□□□□ -1.45
SCAF11-201ENST00000266589 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
SCAF11-201ENST00000266589 Q1T7F1 81 aa5.97□□□□□ -1.45
SCAF11-201ENST00000266589 COX6B2Q6YFQ2 88 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms